RNA–Protein interactions for RNA: ENST00000479635.1

VSIG1-204, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

TSL 3

Gene VSIG1, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-204ENST00000479635 ASTLQ6HA08 431 aaPredicted RBP11.41□□□□□ -0.58
VSIG1-204ENST00000479635 ATMINO43313 823 aaPredicted RBP11.4□□□□□ -0.58
VSIG1-204ENST00000479635 TSPYL2Q9H2G4 693 aaPredicted RBP11.4□□□□□ -0.58
VSIG1-204ENST00000479635 SLC39A7Q92504 469 aa11.39□□□□□ -0.59
VSIG1-204ENST00000479635 C7P10643 843 aa11.38□□□□□ -0.59
VSIG1-204ENST00000479635 POTEJP0CG39 1038 aa11.35□□□□□ -0.59
VSIG1-204ENST00000479635 MAMSTRQ6ZN01 415 aa11.33□□□□□ -0.6
VSIG1-204ENST00000479635 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
VSIG1-204ENST00000479635 CCDC61Q9Y6R9 512 aa11.29□□□□□ -0.6
VSIG1-204ENST00000479635 SCUBE2Q9NQ36 999 aa11.27□□□□□ -0.61
VSIG1-204ENST00000479635 FAM163AQ96GL9 167 aaPredicted RBP11.26□□□□□ -0.61
VSIG1-204ENST00000479635 KIF12Q96FN5 646 aa11.25□□□□□ -0.61
VSIG1-204ENST00000479635 PCDH10Q9P2E7 1040 aa11.24□□□□□ -0.61
VSIG1-204ENST00000479635 PROM2Q8N271 834 aa11.23□□□□□ -0.61
VSIG1-204ENST00000479635 BMP2KQ9NSY1 1161 aaPredicted RBP11.22□□□□□ -0.61
VSIG1-204ENST00000479635 TRPC6Q9Y210 931 aa11.22□□□□□ -0.61
VSIG1-204ENST00000479635 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
VSIG1-204ENST00000479635 MAP3K13O43283 966 aa11.2□□□□□ -0.62
VSIG1-204ENST00000479635 LCE2DQ5TA82 110 aaPredicted RBP11.19□□□□□ -0.62
VSIG1-204ENST00000479635 MIER1Q8N108 512 aa11.19□□□□□ -0.62
VSIG1-204ENST00000479635 POTEFA5A3E0 1075 aa11.18□□□□□ -0.62
VSIG1-204ENST00000479635 TIE1P35590 1138 aa11.16□□□□□ -0.62
VSIG1-204ENST00000479635 RASEFQ8IZ41 740 aa11.16□□□□□ -0.62
VSIG1-204ENST00000479635 SEC24BO95487 1268 aa11.14□□□□□ -0.63
VSIG1-204ENST00000479635 TTLL13PA6NNM8 815 aa11.11□□□□□ -0.63
VSIG1-204ENST00000479635 COLQQ9Y215 455 aaPredicted RBP11.1□□□□□ -0.63
VSIG1-204ENST00000479635 PLCD3Q8N3E9 789 aa11.07□□□□□ -0.64
VSIG1-204ENST00000479635 TRIM35Q9UPQ4 493 aa11.05□□□□□ -0.64
VSIG1-204ENST00000479635 PCDHB13Q9Y5F0 798 aa11.05□□□□□ -0.64
VSIG1-204ENST00000479635 IER5LQ5T953 404 aa11□□□□□ -0.65
VSIG1-204ENST00000479635 CDAN1Q8IWY9 1227 aa10.99□□□□□ -0.65
VSIG1-204ENST00000479635 SGIP1Q9BQI5 828 aa10.99□□□□□ -0.65
VSIG1-204ENST00000479635 SLAIN1Q8ND83 568 aa10.97□□□□□ -0.65
VSIG1-204ENST00000479635 IFNL1Q8IU54 200 aa10.96□□□□□ -0.65
VSIG1-204ENST00000479635 TMEM106CQ9BVX2 250 aa10.95□□□□□ -0.66
VSIG1-204ENST00000479635 ZBTB47Q9UFB7 747 aaPredicted RBP10.95□□□□□ -0.66
VSIG1-204ENST00000479635 NUBP1P53384 320 aa10.94□□□□□ -0.66
VSIG1-204ENST00000479635 PLCG2P16885 1265 aa10.92□□□□□ -0.66
VSIG1-204ENST00000479635 FAM212AQ96EL1 285 aa10.92□□□□□ -0.66
VSIG1-204ENST00000479635 ST18O60284 1047 aa10.91□□□□□ -0.66
VSIG1-204ENST00000479635 IRX5P78411 483 aaPredicted RBP10.84□□□□□ -0.67
VSIG1-204ENST00000479635 DCAF8Q5TAQ9 597 aa10.81□□□□□ -0.68
VSIG1-204ENST00000479635 PYGBP11216 843 aa10.8□□□□□ -0.68
VSIG1-204ENST00000479635 OCEL1Q9H607 264 aa10.8□□□□□ -0.68
VSIG1-204ENST00000479635 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.76□□□□□ -0.69
VSIG1-204ENST00000479635 PCDHB8Q9UN66 801 aa10.76□□□□□ -0.69
VSIG1-204ENST00000479635 SNPHO15079 494 aa10.74□□□□□ -0.69
VSIG1-204ENST00000479635 FKBP8Q14318 412 aa10.74□□□□□ -0.69
VSIG1-204ENST00000479635 MARVELD3Q96A59 401 aa10.74□□□□□ -0.69
VSIG1-204ENST00000479635 TMEM121BQ9BXQ6 578 aaPredicted RBP10.74□□□□□ -0.69
VSIG1-204ENST00000479635 MMRN1Q13201 1228 aa10.72□□□□□ -0.69
VSIG1-204ENST00000479635 SPNS2Q8IVW8 549 aa10.71□□□□□ -0.69
VSIG1-204ENST00000479635 GOLGA2Q08379 1002 aa10.66□□□□□ -0.7
VSIG1-204ENST00000479635 C3orf67Q6ZVT6 689 aa10.65□□□□□ -0.7
VSIG1-204ENST00000479635 EMP3P54852 163 aa10.62□□□□□ -0.71
VSIG1-204ENST00000479635 MKRN3Q13064 507 aaKnown RBP10.62□□□□□ -0.71
VSIG1-204ENST00000479635 PDCD7Q8N8D1 485 aaKnown RBP10.62□□□□□ -0.71
VSIG1-204ENST00000479635 L3MBTL3Q96JM7 780 aaPredicted RBP10.6□□□□□ -0.71
VSIG1-204ENST00000479635 ZNF467Q7Z7K2 595 aaPredicted RBP10.59□□□□□ -0.71
VSIG1-204ENST00000479635 KLHL34Q8N239 644 aa10.59□□□□□ -0.71
VSIG1-204ENST00000479635 FBXO3Q9UK99 471 aa10.59□□□□□ -0.71
VSIG1-204ENST00000479635 GSE1Q14687 1217 aa10.57□□□□□ -0.72
VSIG1-204ENST00000479635 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.57□□□□□ -0.72
VSIG1-204ENST00000479635 FAM205CA6NFA0 338 aa10.55□□□□□ -0.72
VSIG1-204ENST00000479635 PSEN1P49768 467 aa10.53□□□□□ -0.72
VSIG1-204ENST00000479635 HS3ST6Q96QI5 342 aa10.53□□□□□ -0.72
VSIG1-204ENST00000479635 POTEB3A0JP26 581 aa10.51□□□□□ -0.73
VSIG1-204ENST00000479635 POTEBQ6S5H4 581 aa10.51□□□□□ -0.73
VSIG1-204ENST00000479635 KRTAP3-3Q9BYR6 98 aa10.49□□□□□ -0.73
VSIG1-204ENST00000479635 KRTAP3-2Q9BYR7 98 aa10.49□□□□□ -0.73
VSIG1-204ENST00000479635 VASPP50552 380 aaPredicted RBP10.48□□□□□ -0.73
VSIG1-204ENST00000479635 CHRM1P11229 460 aaPredicted RBP10.47□□□□□ -0.73
VSIG1-204ENST00000479635 DPY19L2Q6NUT2 758 aa10.47□□□□□ -0.73
VSIG1-204ENST00000479635 G3V3G9 751 aa10.46□□□□□ -0.73
VSIG1-204ENST00000479635 PDAP1Q13442 181 aaKnown RBP10.44□□□□□ -0.74
VSIG1-204ENST00000479635 CABP2Q9NPB3 220 aa10.43□□□□□ -0.74
VSIG1-204ENST00000479635 BOLA1Q9Y3E2 137 aa10.41□□□□□ -0.74
VSIG1-204ENST00000479635 ILDR1Q86SU0 546 aaPredicted RBP10.4□□□□□ -0.74
VSIG1-204ENST00000479635 ZNF710Q8N1W2 664 aa10.39□□□□□ -0.75
VSIG1-204ENST00000479635 HOXB3P14651 431 aaPredicted RBP10.38□□□□□ -0.75
VSIG1-204ENST00000479635 CIZ1Q9ULV3 898 aaPredicted RBP10.38□□□□□ -0.75
VSIG1-204ENST00000479635 ERBB3P21860 1342 aa10.35□□□□□ -0.75
VSIG1-204ENST00000479635 HOXB1P14653 301 aaPredicted RBP10.34□□□□□ -0.75
VSIG1-204ENST00000479635 DOK7Q18PE1 504 aa10.33□□□□□ -0.76
VSIG1-204ENST00000479635 SPOCK2Q92563 424 aa10.31□□□□□ -0.76
VSIG1-204ENST00000479635 RIMBP2O15034 1052 aa10.28□□□□□ -0.76
VSIG1-204ENST00000479635 RNF166Q96A37 237 aaPredicted RBP10.28□□□□□ -0.76
VSIG1-204ENST00000479635 VARS2Q5ST30 1063 aaKnown RBP10.27□□□□□ -0.77
VSIG1-204ENST00000479635 IFNLR1Q8IU57 520 aaPredicted RBP10.26□□□□□ -0.77
VSIG1-204ENST00000479635 EFCAB3Q8N7B9 438 aa10.26□□□□□ -0.77
VSIG1-204ENST00000479635 MYT1LQ9UL68 1186 aa10.21□□□□□ -0.77
VSIG1-204ENST00000479635 MICALL2Q8IY33 904 aa10.19□□□□□ -0.78
VSIG1-204ENST00000479635 TMEM92Q6UXU6 159 aa10.18□□□□□ -0.78
VSIG1-204ENST00000479635 ZNF687Q8N1G0 1237 aa10.16□□□□□ -0.78
VSIG1-204ENST00000479635 ZSWIM6Q9HCJ5 1215 aa10.16□□□□□ -0.78
VSIG1-204ENST00000479635 GPR153Q6NV75 609 aa10.13□□□□□ -0.79
VSIG1-204ENST00000479635 TRIM41Q8WV44 630 aa10.12□□□□□ -0.79
VSIG1-204ENST00000479635 ARSIQ5FYB1 569 aa10.1□□□□□ -0.79
VSIG1-204ENST00000479635 ANKRD13DQ6ZTN6 518 aa10.1□□□□□ -0.79
VSIG1-204ENST00000479635 SOX12O15370 315 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms