RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 PAXIP1Q6ZW49 1069 aaPredicted RBP12.82□□□□□ -0.36
BRAF-203ENST00000479537 CFAP44Q96MT7 982 aa12.82□□□□□ -0.36
BRAF-203ENST00000479537 CHGAP10645 457 aaKnown RBP12.81□□□□□ -0.36
BRAF-203ENST00000479537 MNX1P50219 401 aaPredicted RBP12.8□□□□□ -0.36
BRAF-203ENST00000479537 NUBP1P53384 320 aa12.8□□□□□ -0.36
BRAF-203ENST00000479537 FAM212AQ96EL1 285 aa12.77□□□□□ -0.37
BRAF-203ENST00000479537 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
BRAF-203ENST00000479537 SPRYD3Q8NCJ5 442 aa12.72□□□□□ -0.37
BRAF-203ENST00000479537 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.37
BRAF-203ENST00000479537 TAOK2Q9UL54 1235 aa12.68□□□□□ -0.38
BRAF-203ENST00000479537 RNF25Q96BH1 459 aaPredicted RBP12.67□□□□□ -0.38
BRAF-203ENST00000479537 RIOK3O14730 519 aaKnown RBP12.66□□□□□ -0.38
BRAF-203ENST00000479537 RASEFQ8IZ41 740 aa12.65□□□□□ -0.38
BRAF-203ENST00000479537 HS6ST3Q8IZP7 471 aa12.65□□□□□ -0.38
BRAF-203ENST00000479537 TSPYL2Q9H2G4 693 aaPredicted RBP12.6□□□□□ -0.39
BRAF-203ENST00000479537 PYGBP11216 843 aa12.57□□□□□ -0.4
BRAF-203ENST00000479537 STK25O00506 426 aa12.56□□□□□ -0.4
BRAF-203ENST00000479537 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
BRAF-203ENST00000479537 BCANQ96GW7 911 aa12.56□□□□□ -0.4
BRAF-203ENST00000479537 TSHZ2Q9NRE2 1034 aa12.56□□□□□ -0.4
BRAF-203ENST00000479537 CHRM1P11229 460 aaPredicted RBP12.55□□□□□ -0.4
BRAF-203ENST00000479537 POTEHQ6S545 545 aa12.54□□□□□ -0.4
BRAF-203ENST00000479537 KDM2AQ9Y2K7 1162 aa12.54□□□□□ -0.4
BRAF-203ENST00000479537 CD44P16070 742 aaKnown RBP12.52□□□□□ -0.41
BRAF-203ENST00000479537 PAK3O75914 559 aaPredicted RBP12.51□□□□□ -0.41
BRAF-203ENST00000479537 HAX1O00165 279 aa12.5□□□□□ -0.41
BRAF-203ENST00000479537 STK24Q9Y6E0 443 aa12.48□□□□□ -0.41
BRAF-203ENST00000479537 C19orf67A6NJJ6 358 aa12.47□□□□□ -0.41
BRAF-203ENST00000479537 DNAJC5Q9H3Z4 198 aa12.47□□□□□ -0.41
BRAF-203ENST00000479537 ZRANB1Q9UGI0 708 aa12.47□□□□□ -0.41
BRAF-203ENST00000479537 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.46□□□□□ -0.41
BRAF-203ENST00000479537 ZFP91Q96JP5 570 aaPredicted RBP12.46□□□□□ -0.41
BRAF-203ENST00000479537 BCL11BQ9C0K0 894 aaPredicted RBP12.46□□□□□ -0.41
BRAF-203ENST00000479537 NKX1-1Q15270 411 aaPredicted RBP12.44□□□□□ -0.42
BRAF-203ENST00000479537 CCDC61Q9Y6R9 512 aa12.42□□□□□ -0.42
BRAF-203ENST00000479537 SGIP1Q9BQI5 828 aa12.41□□□□□ -0.42
BRAF-203ENST00000479537 GTPBP6O43824 516 aaPredicted RBP12.39□□□□□ -0.43
BRAF-203ENST00000479537 ZNF467Q7Z7K2 595 aaPredicted RBP12.39□□□□□ -0.43
BRAF-203ENST00000479537 EVX2Q03828 476 aa12.38□□□□□ -0.43
BRAF-203ENST00000479537 PHF12Q96QT6 1004 aa12.37□□□□□ -0.43
BRAF-203ENST00000479537 RYDENQ9NUL5 291 aaKnown RBP12.36□□□□□ -0.43
BRAF-203ENST00000479537 PDAP1Q13442 181 aaKnown RBP12.31□□□□□ -0.44
BRAF-203ENST00000479537 ZNF579Q8NAF0 562 aaKnown RBP12.31□□□□□ -0.44
BRAF-203ENST00000479537 KIF12Q96FN5 646 aa12.31□□□□□ -0.44
BRAF-203ENST00000479537 PCDHB8Q9UN66 801 aa12.31□□□□□ -0.44
BRAF-203ENST00000479537 PCDHB13Q9Y5F0 798 aa12.31□□□□□ -0.44
BRAF-203ENST00000479537 MAP3K13O43283 966 aa12.3□□□□□ -0.44
BRAF-203ENST00000479537 NBR1Q14596 966 aa12.27□□□□□ -0.45
BRAF-203ENST00000479537 PSEN1P49768 467 aa12.25□□□□□ -0.45
BRAF-203ENST00000479537 PRKCSHP14314 528 aaPredicted RBP12.23□□□□□ -0.45
BRAF-203ENST00000479537 IFNL1Q8IU54 200 aa12.23□□□□□ -0.45
BRAF-203ENST00000479537 MS4A3Q96HJ5 214 aa12.2□□□□□ -0.46
BRAF-203ENST00000479537 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
BRAF-203ENST00000479537 GALR2O43603 387 aaPredicted RBP12.16□□□□□ -0.46
BRAF-203ENST00000479537 TRPC6Q9Y210 931 aa12.14□□□□□ -0.47
BRAF-203ENST00000479537 GABBR2O75899 941 aa12.13□□□□□ -0.47
BRAF-203ENST00000479537 CABP2Q9NPB3 220 aa12.12□□□□□ -0.47
BRAF-203ENST00000479537 CLCN6P51797 869 aa12.11□□□□□ -0.47
BRAF-203ENST00000479537 SP7Q8TDD2 431 aaPredicted RBP12.1□□□□□ -0.47
BRAF-203ENST00000479537 MFRPQ9BY79 579 aa12.1□□□□□ -0.47
BRAF-203ENST00000479537 WDR70Q9NW82 654 aa12.09□□□□□ -0.47
BRAF-203ENST00000479537 EFCAB3Q8N7B9 438 aa12.08□□□□□ -0.48
BRAF-203ENST00000479537 TMEM106CQ9BVX2 250 aa12.06□□□□□ -0.48
BRAF-203ENST00000479537 NLRP6P59044 892 aa12.05□□□□□ -0.48
BRAF-203ENST00000479537 GOLGA2Q08379 1002 aa12.03□□□□□ -0.48
BRAF-203ENST00000479537 CADPS2Q86UW7 1296 aa12.03□□□□□ -0.48
BRAF-203ENST00000479537 P3H3Q8IVL6 736 aa12.03□□□□□ -0.48
BRAF-203ENST00000479537 SOX12O15370 315 aa12.02□□□□□ -0.49
BRAF-203ENST00000479537 BMP2KQ9NSY1 1161 aaPredicted RBP12.02□□□□□ -0.49
BRAF-203ENST00000479537 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.49
BRAF-203ENST00000479537 TIE1P35590 1138 aa12.01□□□□□ -0.49
BRAF-203ENST00000479537 TTLL13PA6NNM8 815 aa12□□□□□ -0.49
BRAF-203ENST00000479537 PPP1R37O75864 691 aa11.98□□□□□ -0.49
BRAF-203ENST00000479537 FBXO22Q8NEZ5 403 aa11.98□□□□□ -0.49
BRAF-203ENST00000479537 DCBLD2Q96PD2 775 aa11.98□□□□□ -0.49
BRAF-203ENST00000479537 ATMINO43313 823 aaPredicted RBP11.94□□□□□ -0.5
BRAF-203ENST00000479537 ATN1P54259 1190 aaPredicted RBP11.94□□□□□ -0.5
BRAF-203ENST00000479537 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
BRAF-203ENST00000479537 KCNV2Q8TDN2 545 aa11.92□□□□□ -0.5
BRAF-203ENST00000479537 MKRN3Q13064 507 aaKnown RBP11.91□□□□□ -0.5
BRAF-203ENST00000479537 ASTLQ6HA08 431 aaPredicted RBP11.91□□□□□ -0.5
BRAF-203ENST00000479537 POTEIP0CG38 1075 aa11.87□□□□□ -0.51
BRAF-203ENST00000479537 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
BRAF-203ENST00000479537 MS4A4AQ96JQ5 239 aa11.85□□□□□ -0.51
BRAF-203ENST00000479537 E2F4Q16254 413 aa11.82□□□□□ -0.52
BRAF-203ENST00000479537 LARP6Q9BRS8 491 aaKnown RBP11.81□□□□□ -0.52
BRAF-203ENST00000479537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.81□□□□□ -0.522e-6■■■□□ 16.2
BRAF-203ENST00000479537 TULP1O00294 542 aaPredicted RBP11.8□□□□□ -0.52
BRAF-203ENST00000479537 PDE4AP27815 886 aa11.8□□□□□ -0.52
BRAF-203ENST00000479537 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
BRAF-203ENST00000479537 NCKAP5LQ9HCH0 1330 aa11.77□□□□□ -0.53
BRAF-203ENST00000479537 SEC24BO95487 1268 aa11.75□□□□□ -0.53
BRAF-203ENST00000479537 IER5LQ5T953 404 aa11.75□□□□□ -0.53
BRAF-203ENST00000479537 SLC39A7Q92504 469 aa11.75□□□□□ -0.53
BRAF-203ENST00000479537 LMOD2Q6P5Q4 547 aa11.74□□□□□ -0.53
BRAF-203ENST00000479537 DDX27Q96GQ7 796 aaKnown RBP11.74□□□□□ -0.53
BRAF-203ENST00000479537 C7P10643 843 aa11.73□□□□□ -0.53
BRAF-203ENST00000479537 PLCG2P16885 1265 aa11.73□□□□□ -0.53
BRAF-203ENST00000479537 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
BRAF-203ENST00000479537 METRNQ9UJH8 293 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms