RNA–Protein interactions for RNA: ENST00000479325.1

RUNX1-215, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-215ENST00000479325 POTEJP0CG39 1038 aa12.78□□□□□ -0.36
RUNX1-215ENST00000479325 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
RUNX1-215ENST00000479325 ASTLQ6HA08 431 aaPredicted RBP12.75□□□□□ -0.37
RUNX1-215ENST00000479325 CDAN1Q8IWY9 1227 aa12.74□□□□□ -0.37
RUNX1-215ENST00000479325 STAG3Q9UJ98 1225 aa12.72□□□□□ -0.37
RUNX1-215ENST00000479325 ATMINO43313 823 aaPredicted RBP12.71□□□□□ -0.37
RUNX1-215ENST00000479325 NPM1P06748 294 aaKnown RBP eCLIP12.66□□□□□ -0.38
RUNX1-215ENST00000479325 MS4A3Q96HJ5 214 aa12.62□□□□□ -0.39
RUNX1-215ENST00000479325 ATN1P54259 1190 aaPredicted RBP12.51□□□□□ -0.41
RUNX1-215ENST00000479325 MMRN1Q13201 1228 aa12.49□□□□□ -0.41
RUNX1-215ENST00000479325 POTEFA5A3E0 1075 aa12.42□□□□□ -0.42
RUNX1-215ENST00000479325 SPNS2Q8IVW8 549 aa12.42□□□□□ -0.42
RUNX1-215ENST00000479325 SEC24BO95487 1268 aa12.39□□□□□ -0.43
RUNX1-215ENST00000479325 MNX1P50219 401 aaPredicted RBP12.38□□□□□ -0.43
RUNX1-215ENST00000479325 ST18O60284 1047 aa12.37□□□□□ -0.43
RUNX1-215ENST00000479325 TSPYL2Q9H2G4 693 aaPredicted RBP12.34□□□□□ -0.43
RUNX1-215ENST00000479325 BMP2KQ9NSY1 1161 aaPredicted RBP12.34□□□□□ -0.43
RUNX1-215ENST00000479325 SLAIN1Q8ND83 568 aa12.31□□□□□ -0.44
RUNX1-215ENST00000479325 TIE1P35590 1138 aa12.29□□□□□ -0.44
RUNX1-215ENST00000479325 COLQQ9Y215 455 aaPredicted RBP12.28□□□□□ -0.44
RUNX1-215ENST00000479325 KIF12Q96FN5 646 aa12.27□□□□□ -0.45
RUNX1-215ENST00000479325 CCDC61Q9Y6R9 512 aa12.25□□□□□ -0.45
RUNX1-215ENST00000479325 TMEM121BQ9BXQ6 578 aaPredicted RBP12.22□□□□□ -0.45
RUNX1-215ENST00000479325 TRPC6Q9Y210 931 aa12.2□□□□□ -0.46
RUNX1-215ENST00000479325 IER5LQ5T953 404 aa12.19□□□□□ -0.46
RUNX1-215ENST00000479325 SPDYE4A6NLX3 237 aa12.16□□□□□ -0.46
RUNX1-215ENST00000479325 TTLL13PA6NNM8 815 aa12.15□□□□□ -0.46
RUNX1-215ENST00000479325 SNPHO15079 494 aa12.15□□□□□ -0.46
RUNX1-215ENST00000479325 MAP3K13O43283 966 aa12.15□□□□□ -0.46
RUNX1-215ENST00000479325 TRIM35Q9UPQ4 493 aa12.1□□□□□ -0.47
RUNX1-215ENST00000479325 MARVELD3Q96A59 401 aa12.06□□□□□ -0.48
RUNX1-215ENST00000479325 PLCG2P16885 1265 aa12.04□□□□□ -0.48
RUNX1-215ENST00000479325 SGIP1Q9BQI5 828 aa11.97□□□□□ -0.49
RUNX1-215ENST00000479325 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.96□□□□□ -0.49
RUNX1-215ENST00000479325 PLEKHG5O94827 1062 aa11.94□□□□□ -0.5
RUNX1-215ENST00000479325 EMP3P54852 163 aa11.94□□□□□ -0.5
RUNX1-215ENST00000479325 PCDHB13Q9Y5F0 798 aa11.93□□□□□ -0.5
RUNX1-215ENST00000479325 KRTAP3-3Q9BYR6 98 aa11.89□□□□□ -0.51
RUNX1-215ENST00000479325 KRTAP3-2Q9BYR7 98 aa11.89□□□□□ -0.51
RUNX1-215ENST00000479325 RASEFQ8IZ41 740 aa11.88□□□□□ -0.51
RUNX1-215ENST00000479325 TMEM106CQ9BVX2 250 aa11.88□□□□□ -0.51
RUNX1-215ENST00000479325 IRX5P78411 483 aaPredicted RBP11.86□□□□□ -0.51
RUNX1-215ENST00000479325 HS3ST6Q96QI5 342 aa11.86□□□□□ -0.51
RUNX1-215ENST00000479325 OCEL1Q9H607 264 aa11.85□□□□□ -0.51
RUNX1-215ENST00000479325 FAM205CA6NFA0 338 aa11.84□□□□□ -0.51
RUNX1-215ENST00000479325 IFNL1Q8IU54 200 aa11.78□□□□□ -0.52
RUNX1-215ENST00000479325 MIER1Q8N108 512 aa11.78□□□□□ -0.52
RUNX1-215ENST00000479325 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
RUNX1-215ENST00000479325 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
RUNX1-215ENST00000479325 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
RUNX1-215ENST00000479325 RNF166Q96A37 237 aaPredicted RBP11.74□□□□□ -0.53
RUNX1-215ENST00000479325 CCDC180Q9P1Z9 1646 aa11.74□□□□□ -0.53
RUNX1-215ENST00000479325 C3orf67Q6ZVT6 689 aa11.72□□□□□ -0.53
RUNX1-215ENST00000479325 PROM2Q8N271 834 aa11.72□□□□□ -0.53
RUNX1-215ENST00000479325 L3MBTL3Q96JM7 780 aaPredicted RBP11.65□□□□□ -0.54
RUNX1-215ENST00000479325 MYT1LQ9UL68 1186 aa11.61□□□□□ -0.55
RUNX1-215ENST00000479325 PLCD3Q8N3E9 789 aa11.58□□□□□ -0.56
RUNX1-215ENST00000479325 ZBTB47Q9UFB7 747 aaPredicted RBP11.58□□□□□ -0.56
RUNX1-215ENST00000479325 FAM212AQ96EL1 285 aa11.57□□□□□ -0.56
RUNX1-215ENST00000479325 NUBP1P53384 320 aa11.54□□□□□ -0.56
RUNX1-215ENST00000479325 ERBB3P21860 1342 aa11.54□□□□□ -0.56
RUNX1-215ENST00000479325 ZCCHC6Q5VYS8 1495 aaKnown RBP11.51□□□□□ -0.57
RUNX1-215ENST00000479325 ZNF710Q8N1W2 664 aa11.5□□□□□ -0.57
RUNX1-215ENST00000479325 PDCD7Q8N8D1 485 aaKnown RBP11.49□□□□□ -0.57
RUNX1-215ENST00000479325 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
RUNX1-215ENST00000479325 MKRN3Q13064 507 aaKnown RBP11.48□□□□□ -0.57
RUNX1-215ENST00000479325 HOXB1P14653 301 aaPredicted RBP11.47□□□□□ -0.57
RUNX1-215ENST00000479325 PTGER2P43116 358 aa11.45□□□□□ -0.58
RUNX1-215ENST00000479325 SHROOM4Q9ULL8 1493 aa11.42□□□□□ -0.58
RUNX1-215ENST00000479325 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.41□□□□□ -0.58
RUNX1-215ENST00000479325 PCDHB8Q9UN66 801 aa11.41□□□□□ -0.58
RUNX1-215ENST00000479325 HOXB3P14651 431 aaPredicted RBP11.4□□□□□ -0.58
RUNX1-215ENST00000479325 PYGBP11216 843 aa11.39□□□□□ -0.59
RUNX1-215ENST00000479325 DOK7Q18PE1 504 aa11.39□□□□□ -0.59
RUNX1-215ENST00000479325 G3V3G9 751 aa11.38□□□□□ -0.59
RUNX1-215ENST00000479325 VARS2Q5ST30 1063 aaKnown RBP11.38□□□□□ -0.59
RUNX1-215ENST00000479325 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
RUNX1-215ENST00000479325 RIMBP2O15034 1052 aa11.35□□□□□ -0.59
RUNX1-215ENST00000479325 ZNF687Q8N1G0 1237 aa11.34□□□□□ -0.59
RUNX1-215ENST00000479325 PLA2G2EQ9NZK7 142 aa11.3□□□□□ -0.6
RUNX1-215ENST00000479325 ANKRD13DQ6ZTN6 518 aa11.27□□□□□ -0.61
RUNX1-215ENST00000479325 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
RUNX1-215ENST00000479325 SUPT5HO00267 1087 aaKnown RBP11.25□□□□□ -0.61
RUNX1-215ENST00000479325 BOLA1Q9Y3E2 137 aa11.25□□□□□ -0.61
RUNX1-215ENST00000479325 DCAF1Q9Y4B6 1507 aa11.25□□□□□ -0.61
RUNX1-215ENST00000479325 DPY19L2Q6NUT2 758 aa11.22□□□□□ -0.61
RUNX1-215ENST00000479325 ZSWIM6Q9HCJ5 1215 aa11.19□□□□□ -0.62
RUNX1-215ENST00000479325 ILDR1Q86SU0 546 aaPredicted RBP11.18□□□□□ -0.62
RUNX1-215ENST00000479325 PSEN1P49768 467 aa11.17□□□□□ -0.62
RUNX1-215ENST00000479325 HCSTQ9UBK5 93 aa11.16□□□□□ -0.62
RUNX1-215ENST00000479325 EHMT2Q96KQ7 1210 aa11.15□□□□□ -0.62
RUNX1-215ENST00000479325 LSM11P83369 360 aaKnown RBP eCLIP11.1□□□□□ -0.63
RUNX1-215ENST00000479325 DCAF8L2P0C7V8 631 aa11.09□□□□□ -0.63
RUNX1-215ENST00000479325 GPR153Q6NV75 609 aa11.08□□□□□ -0.64
RUNX1-215ENST00000479325 GSE1Q14687 1217 aa11.06□□□□□ -0.64
RUNX1-215ENST00000479325 CHRM1P11229 460 aaPredicted RBP11.03□□□□□ -0.64
RUNX1-215ENST00000479325 CABP2Q9NPB3 220 aa11.03□□□□□ -0.64
RUNX1-215ENST00000479325 PDAP1Q13442 181 aaKnown RBP11.02□□□□□ -0.65
RUNX1-215ENST00000479325 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
RUNX1-215ENST00000479325 IRX2Q9BZI1 471 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms