RNA–Protein interactions for RNA: ENST00000479043.1

ANKRD28-210, Transcript of ankyrin repeat domain 28, humanhuman

TSL 4

Gene ANKRD28, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-210ENST00000479043 POTEJP0CG39 1038 aa13.63□□□□□ -0.23
ANKRD28-210ENST00000479043 ATMINO43313 823 aaPredicted RBP13.62□□□□□ -0.23
ANKRD28-210ENST00000479043 C7P10643 843 aa13.61□□□□□ -0.23
ANKRD28-210ENST00000479043 SLC39A7Q92504 469 aa13.61□□□□□ -0.23
ANKRD28-210ENST00000479043 PCDH10Q9P2E7 1040 aa13.6□□□□□ -0.23
ANKRD28-210ENST00000479043 MAMSTRQ6ZN01 415 aa13.53□□□□□ -0.24
ANKRD28-210ENST00000479043 LCE2DQ5TA82 110 aaPredicted RBP13.51□□□□□ -0.25
ANKRD28-210ENST00000479043 ATN1P54259 1190 aaPredicted RBP13.47□□□□□ -0.25
ANKRD28-210ENST00000479043 CCDC61Q9Y6R9 512 aa13.46□□□□□ -0.25
ANKRD28-210ENST00000479043 TSPYL2Q9H2G4 693 aaPredicted RBP13.45□□□□□ -0.26
ANKRD28-210ENST00000479043 SCUBE2Q9NQ36 999 aa13.43□□□□□ -0.26
ANKRD28-210ENST00000479043 FAM163AQ96GL9 167 aaPredicted RBP13.41□□□□□ -0.26
ANKRD28-210ENST00000479043 POTEFA5A3E0 1075 aa13.4□□□□□ -0.26
ANKRD28-210ENST00000479043 KIF12Q96FN5 646 aa13.4□□□□□ -0.26
ANKRD28-210ENST00000479043 BMP2KQ9NSY1 1161 aaPredicted RBP13.38□□□□□ -0.27
ANKRD28-210ENST00000479043 PROM2Q8N271 834 aa13.37□□□□□ -0.27
ANKRD28-210ENST00000479043 TRPC6Q9Y210 931 aa13.34□□□□□ -0.27
ANKRD28-210ENST00000479043 TIE1P35590 1138 aa13.3□□□□□ -0.28
ANKRD28-210ENST00000479043 MAP3K13O43283 966 aa13.28□□□□□ -0.28
ANKRD28-210ENST00000479043 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
ANKRD28-210ENST00000479043 COLQQ9Y215 455 aaPredicted RBP13.24□□□□□ -0.29
ANKRD28-210ENST00000479043 TTLL13PA6NNM8 815 aa13.22□□□□□ -0.29
ANKRD28-210ENST00000479043 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
ANKRD28-210ENST00000479043 SEC24BO95487 1268 aa13.18□□□□□ -0.3
ANKRD28-210ENST00000479043 CDAN1Q8IWY9 1227 aa13.16□□□□□ -0.3
ANKRD28-210ENST00000479043 PLEKHG5O94827 1062 aa13.15□□□□□ -0.3
ANKRD28-210ENST00000479043 IER5LQ5T953 404 aa13.14□□□□□ -0.31
ANKRD28-210ENST00000479043 MIER1Q8N108 512 aa13.13□□□□□ -0.31
ANKRD28-210ENST00000479043 TRIM35Q9UPQ4 493 aa13.13□□□□□ -0.31
ANKRD28-210ENST00000479043 SGIP1Q9BQI5 828 aa13.12□□□□□ -0.31
ANKRD28-210ENST00000479043 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
ANKRD28-210ENST00000479043 ST18O60284 1047 aa13.05□□□□□ -0.32
ANKRD28-210ENST00000479043 SLAIN1Q8ND83 568 aa13.04□□□□□ -0.32
ANKRD28-210ENST00000479043 IFNL1Q8IU54 200 aa13□□□□□ -0.33
ANKRD28-210ENST00000479043 NUBP1P53384 320 aa12.98□□□□□ -0.33
ANKRD28-210ENST00000479043 PLCD3Q8N3E9 789 aa12.95□□□□□ -0.34
ANKRD28-210ENST00000479043 TMEM106CQ9BVX2 250 aa12.95□□□□□ -0.34
ANKRD28-210ENST00000479043 PLCG2P16885 1265 aa12.94□□□□□ -0.34
ANKRD28-210ENST00000479043 IRX5P78411 483 aaPredicted RBP12.94□□□□□ -0.34
ANKRD28-210ENST00000479043 ZBTB47Q9UFB7 747 aaPredicted RBP12.91□□□□□ -0.34
ANKRD28-210ENST00000479043 MMRN1Q13201 1228 aa12.88□□□□□ -0.35
ANKRD28-210ENST00000479043 TMEM121BQ9BXQ6 578 aaPredicted RBP12.88□□□□□ -0.35
ANKRD28-210ENST00000479043 SPNS2Q8IVW8 549 aa12.87□□□□□ -0.35
ANKRD28-210ENST00000479043 FAM212AQ96EL1 285 aa12.87□□□□□ -0.35
ANKRD28-210ENST00000479043 OCEL1Q9H607 264 aa12.84□□□□□ -0.35
ANKRD28-210ENST00000479043 SNPHO15079 494 aa12.79□□□□□ -0.36
ANKRD28-210ENST00000479043 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.77□□□□□ -0.37
ANKRD28-210ENST00000479043 MARVELD3Q96A59 401 aa12.76□□□□□ -0.37
ANKRD28-210ENST00000479043 PYGBP11216 843 aa12.71□□□□□ -0.37
ANKRD28-210ENST00000479043 PCDHB8Q9UN66 801 aa12.68□□□□□ -0.38
ANKRD28-210ENST00000479043 DCAF8Q5TAQ9 597 aa12.66□□□□□ -0.38
ANKRD28-210ENST00000479043 PDCD7Q8N8D1 485 aaKnown RBP12.66□□□□□ -0.38
ANKRD28-210ENST00000479043 EMP3P54852 163 aa12.61□□□□□ -0.39
ANKRD28-210ENST00000479043 POTEB3A0JP26 581 aa12.6□□□□□ -0.39
ANKRD28-210ENST00000479043 POTEBQ6S5H4 581 aa12.6□□□□□ -0.39
ANKRD28-210ENST00000479043 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
ANKRD28-210ENST00000479043 KRTAP3-3Q9BYR6 98 aa12.6□□□□□ -0.39
ANKRD28-210ENST00000479043 KRTAP3-2Q9BYR7 98 aa12.6□□□□□ -0.39
ANKRD28-210ENST00000479043 L3MBTL3Q96JM7 780 aaPredicted RBP12.57□□□□□ -0.4
ANKRD28-210ENST00000479043 HS3ST6Q96QI5 342 aa12.57□□□□□ -0.4
ANKRD28-210ENST00000479043 FAM205CA6NFA0 338 aa12.53□□□□□ -0.4
ANKRD28-210ENST00000479043 MKRN3Q13064 507 aaKnown RBP12.53□□□□□ -0.4
ANKRD28-210ENST00000479043 ZNF467Q7Z7K2 595 aaPredicted RBP12.52□□□□□ -0.41
ANKRD28-210ENST00000479043 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
ANKRD28-210ENST00000479043 FKBP8Q14318 412 aa12.49□□□□□ -0.41
ANKRD28-210ENST00000479043 ILDR1Q86SU0 546 aaPredicted RBP12.48□□□□□ -0.41
ANKRD28-210ENST00000479043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.48□□□□□ -0.416e-6■□□□□ 8.9
ANKRD28-210ENST00000479043 GSE1Q14687 1217 aa12.45□□□□□ -0.42
ANKRD28-210ENST00000479043 CHRM1P11229 460 aaPredicted RBP12.44□□□□□ -0.42
ANKRD28-210ENST00000479043 PSEN1P49768 467 aa12.42□□□□□ -0.42
ANKRD28-210ENST00000479043 HOXB3P14651 431 aaPredicted RBP12.4□□□□□ -0.42
ANKRD28-210ENST00000479043 FBXO3Q9UK99 471 aa12.4□□□□□ -0.42
ANKRD28-210ENST00000479043 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
ANKRD28-210ENST00000479043 HOXB1P14653 301 aaPredicted RBP12.34□□□□□ -0.43
ANKRD28-210ENST00000479043 BOLA1Q9Y3E2 137 aa12.33□□□□□ -0.44
ANKRD28-210ENST00000479043 PDAP1Q13442 181 aaKnown RBP12.32□□□□□ -0.44
ANKRD28-210ENST00000479043 KLHL34Q8N239 644 aa12.32□□□□□ -0.44
ANKRD28-210ENST00000479043 VASPP50552 380 aaPredicted RBP12.29□□□□□ -0.44
ANKRD28-210ENST00000479043 ZNF710Q8N1W2 664 aa12.28□□□□□ -0.44
ANKRD28-210ENST00000479043 G3V3G9 751 aa12.27□□□□□ -0.45
ANKRD28-210ENST00000479043 CABP2Q9NPB3 220 aa12.27□□□□□ -0.45
ANKRD28-210ENST00000479043 ERBB3P21860 1342 aa12.27□□□□□ -0.45
ANKRD28-210ENST00000479043 DOK7Q18PE1 504 aa12.26□□□□□ -0.45
ANKRD28-210ENST00000479043 RNF166Q96A37 237 aaPredicted RBP12.26□□□□□ -0.45
ANKRD28-210ENST00000479043 VARS2Q5ST30 1063 aaKnown RBP12.19□□□□□ -0.46
ANKRD28-210ENST00000479043 RIMBP2O15034 1052 aa12.17□□□□□ -0.46
ANKRD28-210ENST00000479043 MYT1LQ9UL68 1186 aa12.17□□□□□ -0.46
ANKRD28-210ENST00000479043 ZNF687Q8N1G0 1237 aa12.14□□□□□ -0.47
ANKRD28-210ENST00000479043 ZSWIM6Q9HCJ5 1215 aa12.12□□□□□ -0.47
ANKRD28-210ENST00000479043 TMEM92Q6UXU6 159 aa12.09□□□□□ -0.47
ANKRD28-210ENST00000479043 GPR153Q6NV75 609 aa12.08□□□□□ -0.48
ANKRD28-210ENST00000479043 EFCAB3Q8N7B9 438 aa12.08□□□□□ -0.48
ANKRD28-210ENST00000479043 SPOCK2Q92563 424 aa12.08□□□□□ -0.48
ANKRD28-210ENST00000479043 CIZ1Q9ULV3 898 aaPredicted RBP12.08□□□□□ -0.48
ANKRD28-210ENST00000479043 PTGER2P43116 358 aa12.07□□□□□ -0.48
ANKRD28-210ENST00000479043 MICALL2Q8IY33 904 aa12.06□□□□□ -0.48
ANKRD28-210ENST00000479043 IFNLR1Q8IU57 520 aaPredicted RBP12.04□□□□□ -0.48
ANKRD28-210ENST00000479043 ARSIQ5FYB1 569 aa11.95□□□□□ -0.5
ANKRD28-210ENST00000479043 ANKRD13DQ6ZTN6 518 aa11.95□□□□□ -0.5
ANKRD28-210ENST00000479043 MS4A4AQ96JQ5 239 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms