RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 ZBTB47Q9UFB7 747 aaPredicted RBP13.43□□□□□ -0.26
CCDC171-207ENST00000478913 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
CCDC171-207ENST00000478913 POTEMA6NI47 508 aa13.41□□□□□ -0.26
CCDC171-207ENST00000478913 SPOCK2Q92563 424 aa13.4□□□□□ -0.26
CCDC171-207ENST00000478913 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
CCDC171-207ENST00000478913 POTEGQ6S5H5 508 aa13.35□□□□□ -0.27
CCDC171-207ENST00000478913 PELP1Q8IZL8 1130 aaKnown RBP13.33□□□□□ -0.28
CCDC171-207ENST00000478913 PHF12Q96QT6 1004 aa13.27□□□□□ -0.29
CCDC171-207ENST00000478913 POTEJP0CG39 1038 aa13.25□□□□□ -0.29
CCDC171-207ENST00000478913 MNX1P50219 401 aaPredicted RBP13.22□□□□□ -0.29
CCDC171-207ENST00000478913 LCE2DQ5TA82 110 aaPredicted RBP13.21□□□□□ -0.29
CCDC171-207ENST00000478913 NPM1P06748 294 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC171-207ENST00000478913 PKD2Q13563 968 aa13.18□□□□□ -0.3
CCDC171-207ENST00000478913 CIZ1Q9ULV3 898 aaPredicted RBP13.17□□□□□ -0.3
CCDC171-207ENST00000478913 NUBP1P53384 320 aa13.16□□□□□ -0.3
CCDC171-207ENST00000478913 GSE1Q14687 1217 aa13.11□□□□□ -0.31
CCDC171-207ENST00000478913 ECM2O94769 699 aaPredicted RBP13.1□□□□□ -0.31
CCDC171-207ENST00000478913 FAM212AQ96EL1 285 aa13.1□□□□□ -0.31
CCDC171-207ENST00000478913 DCAF8Q5TAQ9 597 aa13.09□□□□□ -0.31
CCDC171-207ENST00000478913 METRNQ9UJH8 293 aa13.08□□□□□ -0.32
CCDC171-207ENST00000478913 RASEFQ8IZ41 740 aa13.07□□□□□ -0.32
CCDC171-207ENST00000478913 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
CCDC171-207ENST00000478913 MS4A3Q96HJ5 214 aa13.05□□□□□ -0.32
CCDC171-207ENST00000478913 PCDH10Q9P2E7 1040 aa13.05□□□□□ -0.32
CCDC171-207ENST00000478913 ATMINO43313 823 aaPredicted RBP13.04□□□□□ -0.32
CCDC171-207ENST00000478913 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
CCDC171-207ENST00000478913 DCAF8L2P0C7V8 631 aa13.02□□□□□ -0.33
CCDC171-207ENST00000478913 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
CCDC171-207ENST00000478913 FAM163AQ96GL9 167 aaPredicted RBP12.97□□□□□ -0.33
CCDC171-207ENST00000478913 TSPYL2Q9H2G4 693 aaPredicted RBP12.97□□□□□ -0.33
CCDC171-207ENST00000478913 SLC39A7Q92504 469 aa12.96□□□□□ -0.33
CCDC171-207ENST00000478913 POTEFA5A3E0 1075 aa12.95□□□□□ -0.34
CCDC171-207ENST00000478913 RGL2O15211 777 aa12.95□□□□□ -0.34
CCDC171-207ENST00000478913 C7P10643 843 aa12.95□□□□□ -0.34
CCDC171-207ENST00000478913 ATN1P54259 1190 aaPredicted RBP12.91□□□□□ -0.34
CCDC171-207ENST00000478913 PYGBP11216 843 aa12.88□□□□□ -0.35
CCDC171-207ENST00000478913 CHRM1P11229 460 aaPredicted RBP12.87□□□□□ -0.35
CCDC171-207ENST00000478913 MAMSTRQ6ZN01 415 aa12.87□□□□□ -0.35
CCDC171-207ENST00000478913 TRPC6Q9Y210 931 aa12.85□□□□□ -0.35
CCDC171-207ENST00000478913 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
CCDC171-207ENST00000478913 RNF25Q96BH1 459 aaPredicted RBP12.83□□□□□ -0.36
CCDC171-207ENST00000478913 RIOK3O14730 519 aaKnown RBP12.81□□□□□ -0.36
CCDC171-207ENST00000478913 SCUBE2Q9NQ36 999 aa12.8□□□□□ -0.36
CCDC171-207ENST00000478913 TAOK2Q9UL54 1235 aa12.79□□□□□ -0.36
CCDC171-207ENST00000478913 BMP2KQ9NSY1 1161 aaPredicted RBP12.77□□□□□ -0.37
CCDC171-207ENST00000478913 CDAN1Q8IWY9 1227 aa12.75□□□□□ -0.37
CCDC171-207ENST00000478913 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
CCDC171-207ENST00000478913 ZNF467Q7Z7K2 595 aaPredicted RBP12.74□□□□□ -0.37
CCDC171-207ENST00000478913 VGFO15240 615 aaPredicted RBP12.73□□□□□ -0.37
CCDC171-207ENST00000478913 KIF12Q96FN5 646 aa12.73□□□□□ -0.37
CCDC171-207ENST00000478913 COLQQ9Y215 455 aaPredicted RBP12.72□□□□□ -0.37
CCDC171-207ENST00000478913 PCDHB13Q9Y5F0 798 aa12.7□□□□□ -0.38
CCDC171-207ENST00000478913 MAP3K13O43283 966 aa12.68□□□□□ -0.38
CCDC171-207ENST00000478913 HS6ST3Q8IZP7 471 aa12.67□□□□□ -0.38
CCDC171-207ENST00000478913 BBXQ8WY36 941 aaPredicted RBP12.67□□□□□ -0.38
CCDC171-207ENST00000478913 SGIP1Q9BQI5 828 aa12.67□□□□□ -0.38
CCDC171-207ENST00000478913 PCDHB8Q9UN66 801 aa12.67□□□□□ -0.38
CCDC171-207ENST00000478913 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
CCDC171-207ENST00000478913 STK25O00506 426 aa12.65□□□□□ -0.38
CCDC171-207ENST00000478913 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
CCDC171-207ENST00000478913 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
CCDC171-207ENST00000478913 PDAP1Q13442 181 aaKnown RBP12.63□□□□□ -0.39
CCDC171-207ENST00000478913 IFNL1Q8IU54 200 aa12.63□□□□□ -0.39
CCDC171-207ENST00000478913 SLC24A1O60721 1099 aa12.6□□□□□ -0.39
CCDC171-207ENST00000478913 PLCB2Q00722 1185 aa12.6□□□□□ -0.39
CCDC171-207ENST00000478913 BCL11BQ9C0K0 894 aaPredicted RBP12.6□□□□□ -0.39
CCDC171-207ENST00000478913 STK24Q9Y6E0 443 aa12.6□□□□□ -0.39
CCDC171-207ENST00000478913 TIE1P35590 1138 aa12.59□□□□□ -0.39
CCDC171-207ENST00000478913 TTLL13PA6NNM8 815 aa12.58□□□□□ -0.4
CCDC171-207ENST00000478913 ST18O60284 1047 aa12.58□□□□□ -0.4
CCDC171-207ENST00000478913 PSEN1P49768 467 aa12.58□□□□□ -0.4
CCDC171-207ENST00000478913 DNAJC5Q9H3Z4 198 aa12.54□□□□□ -0.4
CCDC171-207ENST00000478913 PAXIP1Q6ZW49 1069 aaPredicted RBP12.53□□□□□ -0.4
CCDC171-207ENST00000478913 MMRN1Q13201 1228 aa12.51□□□□□ -0.41
CCDC171-207ENST00000478913 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
CCDC171-207ENST00000478913 SEC24BO95487 1268 aa12.5□□□□□ -0.41
CCDC171-207ENST00000478913 SPRYD3Q8NCJ5 442 aa12.49□□□□□ -0.41
CCDC171-207ENST00000478913 SPNS2Q8IVW8 549 aa12.48□□□□□ -0.41
CCDC171-207ENST00000478913 SLAIN1Q8ND83 568 aa12.48□□□□□ -0.41
CCDC171-207ENST00000478913 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
CCDC171-207ENST00000478913 NKX1-1Q15270 411 aaPredicted RBP12.46□□□□□ -0.41
CCDC171-207ENST00000478913 HAP1P54257 671 aaPredicted RBP12.44□□□□□ -0.42
CCDC171-207ENST00000478913 TMEM106CQ9BVX2 250 aa12.44□□□□□ -0.42
CCDC171-207ENST00000478913 CABP2Q9NPB3 220 aa12.43□□□□□ -0.42
CCDC171-207ENST00000478913 IER5LQ5T953 404 aa12.41□□□□□ -0.42
CCDC171-207ENST00000478913 RYDENQ9NUL5 291 aaKnown RBP12.4□□□□□ -0.42
CCDC171-207ENST00000478913 GOLGA2Q08379 1002 aa12.39□□□□□ -0.43
CCDC171-207ENST00000478913 GTPBP6O43824 516 aaPredicted RBP12.37□□□□□ -0.43
CCDC171-207ENST00000478913 EFCAB3Q8N7B9 438 aa12.37□□□□□ -0.43
CCDC171-207ENST00000478913 SOX12O15370 315 aa12.32□□□□□ -0.44
CCDC171-207ENST00000478913 MFRPQ9BY79 579 aa12.32□□□□□ -0.44
CCDC171-207ENST00000478913 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
CCDC171-207ENST00000478913 MKRN3Q13064 507 aaKnown RBP12.31□□□□□ -0.44
CCDC171-207ENST00000478913 MARVELD3Q96A59 401 aa12.31□□□□□ -0.44
CCDC171-207ENST00000478913 NLRP6P59044 892 aa12.29□□□□□ -0.44
CCDC171-207ENST00000478913 PHF8Q9UPP1 1060 aa12.28□□□□□ -0.44
CCDC171-207ENST00000478913 TSHZ2Q9NRE2 1034 aa12.27□□□□□ -0.45
CCDC171-207ENST00000478913 PLCG2P16885 1265 aa12.25□□□□□ -0.45
CCDC171-207ENST00000478913 FBXO22Q8NEZ5 403 aa12.25□□□□□ -0.45
CCDC171-207ENST00000478913 TMEM121BQ9BXQ6 578 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms