RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 TSPYL2Q9H2G4 693 aaPredicted RBP5.34□□□□□ -1.55
PDE1C-208ENST00000478736 LCE2DQ5TA82 110 aaPredicted RBP5.33□□□□□ -1.56
PDE1C-208ENST00000478736 CD44P16070 742 aaKnown RBP5.31□□□□□ -1.56
PDE1C-208ENST00000478736 SPOCK2Q92563 424 aa5.3□□□□□ -1.56
PDE1C-208ENST00000478736 FAM163AQ96GL9 167 aaPredicted RBP5.3□□□□□ -1.56
PDE1C-208ENST00000478736 PHF12Q96QT6 1004 aa5.3□□□□□ -1.56
PDE1C-208ENST00000478736 ZRANB1Q9UGI0 708 aa5.3□□□□□ -1.56
PDE1C-208ENST00000478736 PLEKHG5O94827 1062 aa5.29□□□□□ -1.56
PDE1C-208ENST00000478736 NPM1P06748 294 aaKnown RBP eCLIP5.28□□□□□ -1.56
PDE1C-208ENST00000478736 CLCN6P51797 869 aa5.28□□□□□ -1.56
PDE1C-208ENST00000478736 DCAF8Q5TAQ9 597 aa5.28□□□□□ -1.56
PDE1C-208ENST00000478736 CCDC61Q9Y6R9 512 aa5.27□□□□□ -1.57
PDE1C-208ENST00000478736 PYGBP11216 843 aa5.26□□□□□ -1.57
PDE1C-208ENST00000478736 PKD2Q13563 968 aa5.26□□□□□ -1.57
PDE1C-208ENST00000478736 CDAN1Q8IWY9 1227 aa5.26□□□□□ -1.57
PDE1C-208ENST00000478736 CIZ1Q9ULV3 898 aaPredicted RBP5.26□□□□□ -1.57
PDE1C-208ENST00000478736 TRPC6Q9Y210 931 aa5.25□□□□□ -1.57
PDE1C-208ENST00000478736 RTN4Q9NQC3 1192 aaKnown RBP5.24□□□□□ -1.57
PDE1C-208ENST00000478736 ZBTB47Q9UFB7 747 aaPredicted RBP5.24□□□□□ -1.57
PDE1C-208ENST00000478736 MAP3K13O43283 966 aa5.23□□□□□ -1.57
PDE1C-208ENST00000478736 GALR2O43603 387 aaPredicted RBP5.23□□□□□ -1.57
PDE1C-208ENST00000478736 KIF12Q96FN5 646 aa5.23□□□□□ -1.57
PDE1C-208ENST00000478736 ZNF579Q8NAF0 562 aaKnown RBP5.21□□□□□ -1.58
PDE1C-208ENST00000478736 RNF25Q96BH1 459 aaPredicted RBP5.21□□□□□ -1.58
PDE1C-208ENST00000478736 FAM212AQ96EL1 285 aa5.21□□□□□ -1.58
PDE1C-208ENST00000478736 MS4A3Q96HJ5 214 aa5.21□□□□□ -1.58
PDE1C-208ENST00000478736 PCDHB8Q9UN66 801 aa5.21□□□□□ -1.58
PDE1C-208ENST00000478736 PCDHB13Q9Y5F0 798 aa5.21□□□□□ -1.58
PDE1C-208ENST00000478736 MMRN1Q13201 1228 aa5.2□□□□□ -1.58
PDE1C-208ENST00000478736 RGL2O15211 777 aa5.19□□□□□ -1.58
PDE1C-208ENST00000478736 IFNL1Q8IU54 200 aa5.19□□□□□ -1.58
PDE1C-208ENST00000478736 PAK3O75914 559 aaPredicted RBP5.18□□□□□ -1.58
PDE1C-208ENST00000478736 GSE1Q14687 1217 aa5.18□□□□□ -1.58
PDE1C-208ENST00000478736 ECM2O94769 699 aaPredicted RBP5.17□□□□□ -1.58
PDE1C-208ENST00000478736 POTEJP0CG39 1038 aa5.17□□□□□ -1.58
PDE1C-208ENST00000478736 PELP1Q8IZL8 1130 aaKnown RBP5.15□□□□□ -1.59
PDE1C-208ENST00000478736 CHRM1P11229 460 aaPredicted RBP5.14□□□□□ -1.59
PDE1C-208ENST00000478736 MAMSTRQ6ZN01 415 aa5.14□□□□□ -1.59
PDE1C-208ENST00000478736 SPNS2Q8IVW8 549 aa5.14□□□□□ -1.59
PDE1C-208ENST00000478736 BMP2KQ9NSY1 1161 aaPredicted RBP5.13□□□□□ -1.59
PDE1C-208ENST00000478736 ATN1P54259 1190 aaPredicted RBP5.11□□□□□ -1.59
PDE1C-208ENST00000478736 TTLL13PA6NNM8 815 aa5.1□□□□□ -1.59
PDE1C-208ENST00000478736 ATMINO43313 823 aaPredicted RBP5.1□□□□□ -1.59
PDE1C-208ENST00000478736 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.09□□□□□ -1.59
PDE1C-208ENST00000478736 PSEN1P49768 467 aa5.09□□□□□ -1.59
PDE1C-208ENST00000478736 AMER1Q5JTC6 1135 aaPredicted RBP5.09□□□□□ -1.59
PDE1C-208ENST00000478736 ZFP91Q96JP5 570 aaPredicted RBP5.09□□□□□ -1.59
PDE1C-208ENST00000478736 TMEM106CQ9BVX2 250 aa5.09□□□□□ -1.59
PDE1C-208ENST00000478736 RIOK3O14730 519 aaKnown RBP5.08□□□□□ -1.6
PDE1C-208ENST00000478736 SGIP1Q9BQI5 828 aa5.08□□□□□ -1.6
PDE1C-208ENST00000478736 SCUBE2Q9NQ36 999 aa5.08□□□□□ -1.6
PDE1C-208ENST00000478736 METRNQ9UJH8 293 aa5.08□□□□□ -1.6
PDE1C-208ENST00000478736 POTEFA5A3E0 1075 aa5.06□□□□□ -1.6
PDE1C-208ENST00000478736 ASTLQ6HA08 431 aaPredicted RBP5.06□□□□□ -1.6
PDE1C-208ENST00000478736 TRIM35Q9UPQ4 493 aa5.06□□□□□ -1.6
PDE1C-208ENST00000478736 DCAF8L2P0C7V8 631 aa5.05□□□□□ -1.6
PDE1C-208ENST00000478736 TIE1P35590 1138 aa5.05□□□□□ -1.6
PDE1C-208ENST00000478736 ZNF467Q7Z7K2 595 aaPredicted RBP5.05□□□□□ -1.6
PDE1C-208ENST00000478736 TRIM41Q8WV44 630 aa5.05□□□□□ -1.6
PDE1C-208ENST00000478736 BCL11BQ9C0K0 894 aaPredicted RBP5.05□□□□□ -1.6
PDE1C-208ENST00000478736 CHGAP10645 457 aaKnown RBP5.04□□□□□ -1.6
PDE1C-208ENST00000478736 PDAP1Q13442 181 aaKnown RBP5.04□□□□□ -1.6
PDE1C-208ENST00000478736 CABP2Q9NPB3 220 aa5.04□□□□□ -1.6
PDE1C-208ENST00000478736 COLQQ9Y215 455 aaPredicted RBP5.04□□□□□ -1.6
PDE1C-208ENST00000478736 STK25O00506 426 aa5.03□□□□□ -1.6
PDE1C-208ENST00000478736 VGFO15240 615 aaPredicted RBP5.03□□□□□ -1.6
PDE1C-208ENST00000478736 NKX1-1Q15270 411 aaPredicted RBP5.03□□□□□ -1.6
PDE1C-208ENST00000478736 EFCAB3Q8N7B9 438 aa5.03□□□□□ -1.6
PDE1C-208ENST00000478736 STK24Q9Y6E0 443 aa5.03□□□□□ -1.6
PDE1C-208ENST00000478736 C7P10643 843 aa5.02□□□□□ -1.61
PDE1C-208ENST00000478736 DPY19L2Q6NUT2 758 aa5.02□□□□□ -1.61
PDE1C-208ENST00000478736 SLC39A7Q92504 469 aa5.02□□□□□ -1.61
PDE1C-208ENST00000478736 PHF8Q9UPP1 1060 aa5□□□□□ -1.61
PDE1C-208ENST00000478736 IRX5P78411 483 aaPredicted RBP4.99□□□□□ -1.61
PDE1C-208ENST00000478736 MS4A4AQ96JQ5 239 aa4.99□□□□□ -1.61
PDE1C-208ENST00000478736 PPP1R37O75864 691 aa4.98□□□□□ -1.61
PDE1C-208ENST00000478736 HS6ST3Q8IZP7 471 aa4.98□□□□□ -1.61
PDE1C-208ENST00000478736 MFRPQ9BY79 579 aa4.98□□□□□ -1.61
PDE1C-208ENST00000478736 ST18O60284 1047 aa4.97□□□□□ -1.61
PDE1C-208ENST00000478736 PDCD7Q8N8D1 485 aaKnown RBP4.97□□□□□ -1.61
PDE1C-208ENST00000478736 FBXO22Q8NEZ5 403 aa4.96□□□□□ -1.62
PDE1C-208ENST00000478736 MKRN3Q13064 507 aaKnown RBP4.95□□□□□ -1.62
PDE1C-208ENST00000478736 ILDR1Q86SU0 546 aaPredicted RBP4.95□□□□□ -1.62
PDE1C-208ENST00000478736 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.95□□□□□ -1.62
PDE1C-208ENST00000478736 GTPBP6O43824 516 aaPredicted RBP4.93□□□□□ -1.62
PDE1C-208ENST00000478736 SEC24BO95487 1268 aa4.93□□□□□ -1.62
PDE1C-208ENST00000478736 GOLGA2Q08379 1002 aa4.93□□□□□ -1.62
PDE1C-208ENST00000478736 OCEL1Q9H607 264 aa4.93□□□□□ -1.62
PDE1C-208ENST00000478736 IER5LQ5T953 404 aa4.91□□□□□ -1.62
PDE1C-208ENST00000478736 DNAJC5Q9H3Z4 198 aa4.91□□□□□ -1.62
PDE1C-208ENST00000478736 SOX12O15370 315 aa4.9□□□□□ -1.63
PDE1C-208ENST00000478736 PLCG2P16885 1265 aa4.9□□□□□ -1.63
PDE1C-208ENST00000478736 TMEM92Q6UXU6 159 aa4.9□□□□□ -1.63
PDE1C-208ENST00000478736 TAOK2Q9UL54 1235 aa4.9□□□□□ -1.63
PDE1C-208ENST00000478736 PAXIP1Q6ZW49 1069 aaPredicted RBP4.89□□□□□ -1.63
PDE1C-208ENST00000478736 BBXQ8WY36 941 aaPredicted RBP4.89□□□□□ -1.63
PDE1C-208ENST00000478736 CFAP44Q96MT7 982 aa4.89□□□□□ -1.63
PDE1C-208ENST00000478736 NLRP6P59044 892 aa4.88□□□□□ -1.63
PDE1C-208ENST00000478736 CADPS2Q86UW7 1296 aa4.88□□□□□ -1.63
PDE1C-208ENST00000478736 MICALL2Q8IY33 904 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms