RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 GSE1Q14687 1217 aa7.32□□□□□ -1.24
GARNL3-214ENST00000478696 RASEFQ8IZ41 740 aa7.32□□□□□ -1.24
GARNL3-214ENST00000478696 ZNF579Q8NAF0 562 aaKnown RBP7.31□□□□□ -1.24
GARNL3-214ENST00000478696 CIZ1Q9ULV3 898 aaPredicted RBP7.28□□□□□ -1.24
GARNL3-214ENST00000478696 GABBR2O75899 941 aa7.27□□□□□ -1.25
GARNL3-214ENST00000478696 CCDC61Q9Y6R9 512 aa7.27□□□□□ -1.25
GARNL3-214ENST00000478696 PHF12Q96QT6 1004 aa7.25□□□□□ -1.25
GARNL3-214ENST00000478696 PYGBP11216 843 aa7.21□□□□□ -1.26
GARNL3-214ENST00000478696 TRIM41Q8WV44 630 aa7.21□□□□□ -1.26
GARNL3-214ENST00000478696 KIF12Q96FN5 646 aa7.21□□□□□ -1.26
GARNL3-214ENST00000478696 DCBLD2Q96PD2 775 aa7.21□□□□□ -1.26
GARNL3-214ENST00000478696 SGIP1Q9BQI5 828 aa7.21□□□□□ -1.26
GARNL3-214ENST00000478696 PCDHB13Q9Y5F0 798 aa7.2□□□□□ -1.26
GARNL3-214ENST00000478696 MAP3K13O43283 966 aa7.19□□□□□ -1.26
GARNL3-214ENST00000478696 GALR2O43603 387 aaPredicted RBP7.18□□□□□ -1.26
GARNL3-214ENST00000478696 CHRM1P11229 460 aaPredicted RBP7.17□□□□□ -1.26
GARNL3-214ENST00000478696 MS4A3Q96HJ5 214 aa7.17□□□□□ -1.26
GARNL3-214ENST00000478696 ZNF467Q7Z7K2 595 aaPredicted RBP7.16□□□□□ -1.26
GARNL3-214ENST00000478696 ECM2O94769 699 aaPredicted RBP7.12□□□□□ -1.27
GARNL3-214ENST00000478696 IFNL1Q8IU54 200 aa7.12□□□□□ -1.27
GARNL3-214ENST00000478696 TIE1P35590 1138 aa7.11□□□□□ -1.27
GARNL3-214ENST00000478696 TAOK2Q9UL54 1235 aa7.11□□□□□ -1.27
GARNL3-214ENST00000478696 PCDHB8Q9UN66 801 aa7.09□□□□□ -1.27
GARNL3-214ENST00000478696 GOLGA2Q08379 1002 aa7.07□□□□□ -1.28
GARNL3-214ENST00000478696 ASTLQ6HA08 431 aaPredicted RBP7.07□□□□□ -1.28
GARNL3-214ENST00000478696 TMEM106CQ9BVX2 250 aa7.07□□□□□ -1.28
GARNL3-214ENST00000478696 RIOK3O14730 519 aaKnown RBP7.06□□□□□ -1.28
GARNL3-214ENST00000478696 ATMINO43313 823 aaPredicted RBP7.06□□□□□ -1.28
GARNL3-214ENST00000478696 PDAP1Q13442 181 aaKnown RBP7.06□□□□□ -1.28
GARNL3-214ENST00000478696 PKD2Q13563 968 aa7.06□□□□□ -1.28
GARNL3-214ENST00000478696 BMP2KQ9NSY1 1161 aaPredicted RBP7.06□□□□□ -1.28
GARNL3-214ENST00000478696 TTLL13PA6NNM8 815 aa7.05□□□□□ -1.28
GARNL3-214ENST00000478696 POTEIP0CG38 1075 aa7.04□□□□□ -1.28
GARNL3-214ENST00000478696 PSEN1P49768 467 aa7.04□□□□□ -1.28
GARNL3-214ENST00000478696 ATN1P54259 1190 aaPredicted RBP7.04□□□□□ -1.28
GARNL3-214ENST00000478696 SLC39A7Q92504 469 aa7.04□□□□□ -1.28
GARNL3-214ENST00000478696 TRPC6Q9Y210 931 aa7.04□□□□□ -1.28
GARNL3-214ENST00000478696 VGFO15240 615 aaPredicted RBP7.03□□□□□ -1.28
GARNL3-214ENST00000478696 C7P10643 843 aa7.03□□□□□ -1.28
GARNL3-214ENST00000478696 AMER1Q5JTC6 1135 aaPredicted RBP7.02□□□□□ -1.29
GARNL3-214ENST00000478696 TRIM35Q9UPQ4 493 aa7.02□□□□□ -1.29
GARNL3-214ENST00000478696 SEC24BO95487 1268 aa7□□□□□ -1.29
GARNL3-214ENST00000478696 MKRN3Q13064 507 aaKnown RBP7□□□□□ -1.29
GARNL3-214ENST00000478696 IER5LQ5T953 404 aa6.99□□□□□ -1.29
GARNL3-214ENST00000478696 RGL2O15211 777 aa6.98□□□□□ -1.29
GARNL3-214ENST00000478696 PELP1Q8IZL8 1130 aaKnown RBP6.98□□□□□ -1.29
GARNL3-214ENST00000478696 RNF25Q96BH1 459 aaPredicted RBP6.98□□□□□ -1.29
GARNL3-214ENST00000478696 METRNQ9UJH8 293 aa6.98□□□□□ -1.29
GARNL3-214ENST00000478696 CABP2Q9NPB3 220 aa6.97□□□□□ -1.29
GARNL3-214ENST00000478696 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.96□□□□□ -1.3
GARNL3-214ENST00000478696 ZFP91Q96JP5 570 aaPredicted RBP6.96□□□□□ -1.3
GARNL3-214ENST00000478696 STK25O00506 426 aa6.95□□□□□ -1.3
GARNL3-214ENST00000478696 DCAF8L2P0C7V8 631 aa6.95□□□□□ -1.3
GARNL3-214ENST00000478696 PLCG2P16885 1265 aa6.94□□□□□ -1.3
GARNL3-214ENST00000478696 STK24Q9Y6E0 443 aa6.94□□□□□ -1.3
GARNL3-214ENST00000478696 LHX8Q68G74 356 aa6.93□□□□□ -1.3
GARNL3-214ENST00000478696 BCL11BQ9C0K0 894 aaPredicted RBP6.93□□□□□ -1.3
GARNL3-214ENST00000478696 OCEL1Q9H607 264 aa6.93□□□□□ -1.3
GARNL3-214ENST00000478696 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.91□□□□□ -1.3
GARNL3-214ENST00000478696 SOX12O15370 315 aa6.9□□□□□ -1.3
GARNL3-214ENST00000478696 EFCAB3Q8N7B9 438 aa6.9□□□□□ -1.3
GARNL3-214ENST00000478696 RTN4Q9NQC3 1192 aaKnown RBP6.9□□□□□ -1.3
GARNL3-214ENST00000478696 G3V3G9 751 aa6.89□□□□□ -1.31
GARNL3-214ENST00000478696 CHGAP10645 457 aaKnown RBP6.89□□□□□ -1.31
GARNL3-214ENST00000478696 IRX5P78411 483 aaPredicted RBP6.89□□□□□ -1.31
GARNL3-214ENST00000478696 MAMSTRQ6ZN01 415 aa6.89□□□□□ -1.31
GARNL3-214ENST00000478696 SCUBE2Q9NQ36 999 aa6.87□□□□□ -1.31
GARNL3-214ENST00000478696 COLQQ9Y215 455 aaPredicted RBP6.87□□□□□ -1.31
GARNL3-214ENST00000478696 HS6ST3Q8IZP7 471 aa6.86□□□□□ -1.31
GARNL3-214ENST00000478696 L3MBTL3Q96JM7 780 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-214ENST00000478696 NLRP6P59044 892 aa6.85□□□□□ -1.31
GARNL3-214ENST00000478696 POTEFA5A3E0 1075 aa6.84□□□□□ -1.31
GARNL3-214ENST00000478696 POTEB2H3BUK9 544 aa6.83□□□□□ -1.32
GARNL3-214ENST00000478696 RYDENQ9NUL5 291 aaKnown RBP6.83□□□□□ -1.32
GARNL3-214ENST00000478696 PDCD7Q8N8D1 485 aaKnown RBP6.82□□□□□ -1.32
GARNL3-214ENST00000478696 C3orf67Q6ZVT6 689 aa6.81□□□□□ -1.32
GARNL3-214ENST00000478696 ILDR1Q86SU0 546 aaPredicted RBP6.81□□□□□ -1.32
GARNL3-214ENST00000478696 PHF8Q9UPP1 1060 aa6.81□□□□□ -1.32
GARNL3-214ENST00000478696 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.79□□□□□ -1.32
GARNL3-214ENST00000478696 BOLA1Q9Y3E2 137 aa6.79□□□□□ -1.32
GARNL3-214ENST00000478696 DPY19L2Q6NUT2 758 aa6.78□□□□□ -1.32
GARNL3-214ENST00000478696 MFRPQ9BY79 579 aa6.78□□□□□ -1.32
GARNL3-214ENST00000478696 OTUD5Q96G74 571 aa6.77□□□□□ -1.33
GARNL3-214ENST00000478696 DNAJC5Q9H3Z4 198 aa6.77□□□□□ -1.33
GARNL3-214ENST00000478696 POTEJP0CG39 1038 aa6.76□□□□□ -1.33
GARNL3-214ENST00000478696 FBXO22Q8NEZ5 403 aa6.76□□□□□ -1.33
GARNL3-214ENST00000478696 SLAIN1Q8ND83 568 aa6.75□□□□□ -1.33
GARNL3-214ENST00000478696 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.75□□□□□ -1.33
GARNL3-214ENST00000478696 BBXQ8WY36 941 aaPredicted RBP6.74□□□□□ -1.33
GARNL3-214ENST00000478696 MS4A4AQ96JQ5 239 aa6.74□□□□□ -1.33
GARNL3-214ENST00000478696 MICALL2Q8IY33 904 aa6.72□□□□□ -1.33
GARNL3-214ENST00000478696 TMEM121BQ9BXQ6 578 aaPredicted RBP6.71□□□□□ -1.34
GARNL3-214ENST00000478696 SNPHO15079 494 aa6.7□□□□□ -1.34
GARNL3-214ENST00000478696 NKX1-1Q15270 411 aaPredicted RBP6.7□□□□□ -1.34
GARNL3-214ENST00000478696 SPRYD3Q8NCJ5 442 aa6.68□□□□□ -1.34
GARNL3-214ENST00000478696 GTPBP6O43824 516 aaPredicted RBP6.66□□□□□ -1.34
GARNL3-214ENST00000478696 PPP1R37O75864 691 aa6.66□□□□□ -1.34
GARNL3-214ENST00000478696 TMC2Q8TDI7 906 aa6.66□□□□□ -1.34
GARNL3-214ENST00000478696 CFAP44Q96MT7 982 aa6.64□□□□□ -1.35
GARNL3-214ENST00000478696 PAXIP1Q6ZW49 1069 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms