RNA–Protein interactions for RNA: ENST00000478160.1

NMD3-209, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 3

Gene NMD3, Length 606 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-209ENST00000478160 ATMINO43313 823 aaPredicted RBP12.23□□□□□ -0.45
NMD3-209ENST00000478160 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
NMD3-209ENST00000478160 ASTLQ6HA08 431 aaPredicted RBP12.22□□□□□ -0.45
NMD3-209ENST00000478160 SLC39A7Q92504 469 aa12.22□□□□□ -0.45
NMD3-209ENST00000478160 C7P10643 843 aa12.21□□□□□ -0.45
NMD3-209ENST00000478160 TSPYL2Q9H2G4 693 aaPredicted RBP12.17□□□□□ -0.46
NMD3-209ENST00000478160 MAMSTRQ6ZN01 415 aa12.16□□□□□ -0.46
NMD3-209ENST00000478160 FAM163AQ96GL9 167 aaPredicted RBP12.16□□□□□ -0.46
NMD3-209ENST00000478160 PCDH10Q9P2E7 1040 aa12.15□□□□□ -0.46
NMD3-209ENST00000478160 ATN1P54259 1190 aaPredicted RBP12.11□□□□□ -0.47
NMD3-209ENST00000478160 SCUBE2Q9NQ36 999 aa12.09□□□□□ -0.47
NMD3-209ENST00000478160 LCE2DQ5TA82 110 aaPredicted RBP12.08□□□□□ -0.48
NMD3-209ENST00000478160 CCDC61Q9Y6R9 512 aa12.05□□□□□ -0.48
NMD3-209ENST00000478160 KIF12Q96FN5 646 aa12.02□□□□□ -0.49
NMD3-209ENST00000478160 BMP2KQ9NSY1 1161 aaPredicted RBP12.01□□□□□ -0.49
NMD3-209ENST00000478160 TRPC6Q9Y210 931 aa12.01□□□□□ -0.49
NMD3-209ENST00000478160 POTEFA5A3E0 1075 aa12□□□□□ -0.49
NMD3-209ENST00000478160 MAP3K13O43283 966 aa11.95□□□□□ -0.5
NMD3-209ENST00000478160 SEC24BO95487 1268 aa11.92□□□□□ -0.5
NMD3-209ENST00000478160 TIE1P35590 1138 aa11.91□□□□□ -0.5
NMD3-209ENST00000478160 COLQQ9Y215 455 aaPredicted RBP11.91□□□□□ -0.5
NMD3-209ENST00000478160 RASEFQ8IZ41 740 aa11.88□□□□□ -0.51
NMD3-209ENST00000478160 MIER1Q8N108 512 aa11.88□□□□□ -0.51
NMD3-209ENST00000478160 TTLL13PA6NNM8 815 aa11.87□□□□□ -0.51
NMD3-209ENST00000478160 CDAN1Q8IWY9 1227 aa11.87□□□□□ -0.51
NMD3-209ENST00000478160 PLEKHG5O94827 1062 aa11.86□□□□□ -0.51
NMD3-209ENST00000478160 PROM2Q8N271 834 aa11.86□□□□□ -0.51
NMD3-209ENST00000478160 TRIM35Q9UPQ4 493 aa11.81□□□□□ -0.52
NMD3-209ENST00000478160 SLAIN1Q8ND83 568 aa11.78□□□□□ -0.52
NMD3-209ENST00000478160 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
NMD3-209ENST00000478160 IER5LQ5T953 404 aa11.75□□□□□ -0.53
NMD3-209ENST00000478160 ST18O60284 1047 aa11.74□□□□□ -0.53
NMD3-209ENST00000478160 PLCD3Q8N3E9 789 aa11.71□□□□□ -0.53
NMD3-209ENST00000478160 SGIP1Q9BQI5 828 aa11.7□□□□□ -0.54
NMD3-209ENST00000478160 IFNL1Q8IU54 200 aa11.68□□□□□ -0.54
NMD3-209ENST00000478160 TMEM106CQ9BVX2 250 aa11.68□□□□□ -0.54
NMD3-209ENST00000478160 PLCG2P16885 1265 aa11.67□□□□□ -0.54
NMD3-209ENST00000478160 NUBP1P53384 320 aa11.62□□□□□ -0.55
NMD3-209ENST00000478160 MMRN1Q13201 1228 aa11.59□□□□□ -0.55
NMD3-209ENST00000478160 SPNS2Q8IVW8 549 aa11.58□□□□□ -0.56
NMD3-209ENST00000478160 ZBTB47Q9UFB7 747 aaPredicted RBP11.58□□□□□ -0.56
NMD3-209ENST00000478160 IRX5P78411 483 aaPredicted RBP11.57□□□□□ -0.56
NMD3-209ENST00000478160 FAM212AQ96EL1 285 aa11.57□□□□□ -0.56
NMD3-209ENST00000478160 MARVELD3Q96A59 401 aa11.55□□□□□ -0.56
NMD3-209ENST00000478160 OCEL1Q9H607 264 aa11.53□□□□□ -0.56
NMD3-209ENST00000478160 TMEM121BQ9BXQ6 578 aaPredicted RBP11.52□□□□□ -0.57
NMD3-209ENST00000478160 SNPHO15079 494 aa11.51□□□□□ -0.57
NMD3-209ENST00000478160 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.51□□□□□ -0.57
NMD3-209ENST00000478160 PYGBP11216 843 aa11.47□□□□□ -0.57
NMD3-209ENST00000478160 DCAF8Q5TAQ9 597 aa11.47□□□□□ -0.57
NMD3-209ENST00000478160 PCDHB8Q9UN66 801 aa11.45□□□□□ -0.58
NMD3-209ENST00000478160 EMP3P54852 163 aa11.39□□□□□ -0.59
NMD3-209ENST00000478160 C3orf67Q6ZVT6 689 aa11.37□□□□□ -0.59
NMD3-209ENST00000478160 FAM205CA6NFA0 338 aa11.33□□□□□ -0.6
NMD3-209ENST00000478160 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
NMD3-209ENST00000478160 PDCD7Q8N8D1 485 aaKnown RBP11.33□□□□□ -0.6
NMD3-209ENST00000478160 POTEB3A0JP26 581 aa11.31□□□□□ -0.6
NMD3-209ENST00000478160 POTEBQ6S5H4 581 aa11.31□□□□□ -0.6
NMD3-209ENST00000478160 HS3ST6Q96QI5 342 aa11.31□□□□□ -0.6
NMD3-209ENST00000478160 MKRN3Q13064 507 aaKnown RBP11.3□□□□□ -0.6
NMD3-209ENST00000478160 L3MBTL3Q96JM7 780 aaPredicted RBP11.3□□□□□ -0.6
NMD3-209ENST00000478160 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
NMD3-209ENST00000478160 KRTAP3-2Q9BYR7 98 aa11.3□□□□□ -0.6
NMD3-209ENST00000478160 FKBP8Q14318 412 aa11.27□□□□□ -0.61
NMD3-209ENST00000478160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.615e-7■□□□□ 10.1
NMD3-209ENST00000478160 ZNF467Q7Z7K2 595 aaPredicted RBP11.24□□□□□ -0.61
NMD3-209ENST00000478160 PSEN1P49768 467 aa11.19□□□□□ -0.62
NMD3-209ENST00000478160 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
NMD3-209ENST00000478160 DPY19L2Q6NUT2 758 aa11.18□□□□□ -0.62
NMD3-209ENST00000478160 GSE1Q14687 1217 aa11.17□□□□□ -0.62
NMD3-209ENST00000478160 G3V3G9 751 aa11.13□□□□□ -0.63
NMD3-209ENST00000478160 FBXO3Q9UK99 471 aa11.12□□□□□ -0.63
NMD3-209ENST00000478160 HOXB3P14651 431 aaPredicted RBP11.11□□□□□ -0.63
NMD3-209ENST00000478160 ZNF710Q8N1W2 664 aa11.11□□□□□ -0.63
NMD3-209ENST00000478160 CHRM1P11229 460 aaPredicted RBP11.09□□□□□ -0.63
NMD3-209ENST00000478160 ERBB3P21860 1342 aa11.09□□□□□ -0.63
NMD3-209ENST00000478160 CABP2Q9NPB3 220 aa11.08□□□□□ -0.64
NMD3-209ENST00000478160 BOLA1Q9Y3E2 137 aa11.08□□□□□ -0.64
NMD3-209ENST00000478160 PDAP1Q13442 181 aaKnown RBP11.07□□□□□ -0.64
NMD3-209ENST00000478160 ILDR1Q86SU0 546 aaPredicted RBP11.07□□□□□ -0.64
NMD3-209ENST00000478160 HOXB1P14653 301 aaPredicted RBP11.06□□□□□ -0.64
NMD3-209ENST00000478160 RNF166Q96A37 237 aaPredicted RBP11.05□□□□□ -0.64
NMD3-209ENST00000478160 DOK7Q18PE1 504 aa11.03□□□□□ -0.64
NMD3-209ENST00000478160 VASPP50552 380 aaPredicted RBP11.02□□□□□ -0.65
NMD3-209ENST00000478160 VARS2Q5ST30 1063 aaKnown RBP11□□□□□ -0.65
NMD3-209ENST00000478160 MYT1LQ9UL68 1186 aa10.98□□□□□ -0.65
NMD3-209ENST00000478160 CIZ1Q9ULV3 898 aaPredicted RBP10.96□□□□□ -0.65
NMD3-209ENST00000478160 RIMBP2O15034 1052 aa10.95□□□□□ -0.66
NMD3-209ENST00000478160 ZNF687Q8N1G0 1237 aa10.88□□□□□ -0.67
NMD3-209ENST00000478160 EFCAB3Q8N7B9 438 aa10.88□□□□□ -0.67
NMD3-209ENST00000478160 SPOCK2Q92563 424 aa10.86□□□□□ -0.67
NMD3-209ENST00000478160 TMEM92Q6UXU6 159 aa10.85□□□□□ -0.67
NMD3-209ENST00000478160 ANKRD13DQ6ZTN6 518 aa10.84□□□□□ -0.67
NMD3-209ENST00000478160 MICALL2Q8IY33 904 aa10.83□□□□□ -0.68
NMD3-209ENST00000478160 GPR153Q6NV75 609 aa10.82□□□□□ -0.68
NMD3-209ENST00000478160 ZSWIM6Q9HCJ5 1215 aa10.82□□□□□ -0.68
NMD3-209ENST00000478160 ARSIQ5FYB1 569 aa10.79□□□□□ -0.68
NMD3-209ENST00000478160 IFNLR1Q8IU57 520 aaPredicted RBP10.79□□□□□ -0.68
NMD3-209ENST00000478160 PTGER2P43116 358 aa10.78□□□□□ -0.68
NMD3-209ENST00000478160 KHSRPQ92945 711 aaKnown RBP eCLIP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms