RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 PHF12Q96QT6 1004 aa11.5□□□□□ -0.57
CALD1-218ENST00000478075 POTEJP0CG39 1038 aa11.48□□□□□ -0.57
CALD1-218ENST00000478075 NPM1P06748 294 aaKnown RBP eCLIP11.47□□□□□ -0.57
CALD1-218ENST00000478075 CREBZFQ9NS37 354 aa11.47□□□□□ -0.57
CALD1-218ENST00000478075 ATMINO43313 823 aaPredicted RBP11.46□□□□□ -0.57
CALD1-218ENST00000478075 ZBTB22O15209 634 aa11.38□□□□□ -0.59
CALD1-218ENST00000478075 MMRN1Q13201 1228 aa11.35□□□□□ -0.59
CALD1-218ENST00000478075 MS4A3Q96HJ5 214 aa11.35□□□□□ -0.59
CALD1-218ENST00000478075 SPNS2Q8IVW8 549 aa11.27□□□□□ -0.61
CALD1-218ENST00000478075 ATN1P54259 1190 aaPredicted RBP11.25□□□□□ -0.61
CALD1-218ENST00000478075 SEC24BO95487 1268 aa11.2□□□□□ -0.62
CALD1-218ENST00000478075 TMEM121BQ9BXQ6 578 aaPredicted RBP11.2□□□□□ -0.62
CALD1-218ENST00000478075 ST18O60284 1047 aa11.18□□□□□ -0.62
CALD1-218ENST00000478075 TIE1P35590 1138 aa11.15□□□□□ -0.62
CALD1-218ENST00000478075 POTEFA5A3E0 1075 aa11.14□□□□□ -0.63
CALD1-218ENST00000478075 MNX1P50219 401 aaPredicted RBP11.12□□□□□ -0.63
CALD1-218ENST00000478075 SLAIN1Q8ND83 568 aa11.12□□□□□ -0.63
CALD1-218ENST00000478075 BMP2KQ9NSY1 1161 aaPredicted RBP11.11□□□□□ -0.63
CALD1-218ENST00000478075 IER5LQ5T953 404 aa11.1□□□□□ -0.63
CALD1-218ENST00000478075 SNPHO15079 494 aa11.09□□□□□ -0.63
CALD1-218ENST00000478075 KIF12Q96FN5 646 aa11.04□□□□□ -0.64
CALD1-218ENST00000478075 CCDC61Q9Y6R9 512 aa11.04□□□□□ -0.64
CALD1-218ENST00000478075 TSPYL2Q9H2G4 693 aaPredicted RBP11.03□□□□□ -0.64
CALD1-218ENST00000478075 COLQQ9Y215 455 aaPredicted RBP11.02□□□□□ -0.65
CALD1-218ENST00000478075 TTLL13PA6NNM8 815 aa10.96□□□□□ -0.65
CALD1-218ENST00000478075 TRIM35Q9UPQ4 493 aa10.91□□□□□ -0.66
CALD1-218ENST00000478075 MAP3K13O43283 966 aa10.89□□□□□ -0.67
CALD1-218ENST00000478075 PLCG2P16885 1265 aa10.89□□□□□ -0.67
CALD1-218ENST00000478075 TRPC6Q9Y210 931 aa10.89□□□□□ -0.67
CALD1-218ENST00000478075 SGIP1Q9BQI5 828 aa10.88□□□□□ -0.67
CALD1-218ENST00000478075 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
CALD1-218ENST00000478075 MARVELD3Q96A59 401 aa10.85□□□□□ -0.67
CALD1-218ENST00000478075 EMP3P54852 163 aa10.83□□□□□ -0.68
CALD1-218ENST00000478075 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.83□□□□□ -0.68
CALD1-218ENST00000478075 PLEKHG5O94827 1062 aa10.82□□□□□ -0.68
CALD1-218ENST00000478075 KRTAP3-3Q9BYR6 98 aa10.75□□□□□ -0.69
CALD1-218ENST00000478075 KRTAP3-2Q9BYR7 98 aa10.75□□□□□ -0.69
CALD1-218ENST00000478075 PCDHB13Q9Y5F0 798 aa10.73□□□□□ -0.69
CALD1-218ENST00000478075 HS3ST6Q96QI5 342 aa10.72□□□□□ -0.69
CALD1-218ENST00000478075 IRX5P78411 483 aaPredicted RBP10.71□□□□□ -0.69
CALD1-218ENST00000478075 OCEL1Q9H607 264 aa10.71□□□□□ -0.69
CALD1-218ENST00000478075 RNF166Q96A37 237 aaPredicted RBP10.68□□□□□ -0.7
CALD1-218ENST00000478075 TMEM106CQ9BVX2 250 aa10.68□□□□□ -0.7
CALD1-218ENST00000478075 FAM205CA6NFA0 338 aa10.67□□□□□ -0.7
CALD1-218ENST00000478075 C3orf67Q6ZVT6 689 aa10.62□□□□□ -0.71
CALD1-218ENST00000478075 RASEFQ8IZ41 740 aa10.62□□□□□ -0.71
CALD1-218ENST00000478075 IFNL1Q8IU54 200 aa10.56□□□□□ -0.72
CALD1-218ENST00000478075 POTEB3A0JP26 581 aa10.55□□□□□ -0.72
CALD1-218ENST00000478075 POTEBQ6S5H4 581 aa10.55□□□□□ -0.72
CALD1-218ENST00000478075 L3MBTL3Q96JM7 780 aaPredicted RBP10.55□□□□□ -0.72
CALD1-218ENST00000478075 PTGER2P43116 358 aa10.54□□□□□ -0.72
CALD1-218ENST00000478075 MYT1LQ9UL68 1186 aa10.54□□□□□ -0.72
CALD1-218ENST00000478075 MIER1Q8N108 512 aa10.52□□□□□ -0.73
CALD1-218ENST00000478075 ZBTB47Q9UFB7 747 aaPredicted RBP10.52□□□□□ -0.73
CALD1-218ENST00000478075 FAM212AQ96EL1 285 aa10.45□□□□□ -0.74
CALD1-218ENST00000478075 PROM2Q8N271 834 aa10.44□□□□□ -0.74
CALD1-218ENST00000478075 ERBB3P21860 1342 aa10.42□□□□□ -0.74
CALD1-218ENST00000478075 ZNF710Q8N1W2 664 aa10.4□□□□□ -0.74
CALD1-218ENST00000478075 HOXB1P14653 301 aaPredicted RBP10.39□□□□□ -0.75
CALD1-218ENST00000478075 GOLGA2Q08379 1002 aa10.37□□□□□ -0.75
CALD1-218ENST00000478075 PDCD7Q8N8D1 485 aaKnown RBP10.36□□□□□ -0.75
CALD1-218ENST00000478075 MKRN3Q13064 507 aaKnown RBP10.35□□□□□ -0.75
CALD1-218ENST00000478075 PLCD3Q8N3E9 789 aa10.35□□□□□ -0.75
CALD1-218ENST00000478075 RIMBP2O15034 1052 aa10.34□□□□□ -0.75
CALD1-218ENST00000478075 DOK7Q18PE1 504 aa10.34□□□□□ -0.75
CALD1-218ENST00000478075 NUBP1P53384 320 aa10.32□□□□□ -0.76
CALD1-218ENST00000478075 G3V3G9 751 aa10.3□□□□□ -0.76
CALD1-218ENST00000478075 DCAF8Q5TAQ9 597 aa10.3□□□□□ -0.76
CALD1-218ENST00000478075 HOXB3P14651 431 aaPredicted RBP10.27□□□□□ -0.77
CALD1-218ENST00000478075 ZNF687Q8N1G0 1237 aa10.27□□□□□ -0.77
CALD1-218ENST00000478075 VARS2Q5ST30 1063 aaKnown RBP10.26□□□□□ -0.77
CALD1-218ENST00000478075 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.25□□□□□ -0.778e-8■■■□□ 15.6
CALD1-218ENST00000478075 PLA2G2EQ9NZK7 142 aa10.25□□□□□ -0.77
CALD1-218ENST00000478075 ZSWIM6Q9HCJ5 1215 aa10.21□□□□□ -0.77
CALD1-218ENST00000478075 ZNF467Q7Z7K2 595 aaPredicted RBP10.18□□□□□ -0.78
CALD1-218ENST00000478075 HCSTQ9UBK5 93 aa10.16□□□□□ -0.78
CALD1-218ENST00000478075 PCDHB8Q9UN66 801 aa10.16□□□□□ -0.78
CALD1-218ENST00000478075 PYGBP11216 843 aa10.14□□□□□ -0.79
CALD1-218ENST00000478075 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
CALD1-218ENST00000478075 ANKRD13DQ6ZTN6 518 aa10.13□□□□□ -0.79
CALD1-218ENST00000478075 ILDR1Q86SU0 546 aaPredicted RBP10.11□□□□□ -0.79
CALD1-218ENST00000478075 RGS20O76081 388 aa10.08□□□□□ -0.8
CALD1-218ENST00000478075 CSRNP3Q8WYN3 585 aa10.08□□□□□ -0.8
CALD1-218ENST00000478075 LSM11P83369 360 aaKnown RBP eCLIP10.05□□□□□ -0.8
CALD1-218ENST00000478075 IRX2Q9BZI1 471 aaPredicted RBP10.02□□□□□ -0.81
CALD1-218ENST00000478075 PBX2P40425 430 aa10□□□□□ -0.81
CALD1-218ENST00000478075 PSEN1P49768 467 aa10□□□□□ -0.81
CALD1-218ENST00000478075 DPY19L2Q6NUT2 758 aa9.97□□□□□ -0.81
CALD1-218ENST00000478075 GPR153Q6NV75 609 aa9.97□□□□□ -0.81
CALD1-218ENST00000478075 GSE1Q14687 1217 aa9.96□□□□□ -0.82
CALD1-218ENST00000478075 CHRM1P11229 460 aaPredicted RBP9.93□□□□□ -0.82
CALD1-218ENST00000478075 ZNF316A6NFI3 1004 aaPredicted RBP9.92□□□□□ -0.82
CALD1-218ENST00000478075 PDAP1Q13442 181 aaKnown RBP9.92□□□□□ -0.82
CALD1-218ENST00000478075 CABP2Q9NPB3 220 aa9.86□□□□□ -0.83
CALD1-218ENST00000478075 ARSIQ5FYB1 569 aa9.82□□□□□ -0.84
CALD1-218ENST00000478075 IFFO2Q5TF58 517 aa9.82□□□□□ -0.84
CALD1-218ENST00000478075 ADGRD1Q6QNK2 874 aa9.76□□□□□ -0.85
CALD1-218ENST00000478075 MICALL2Q8IY33 904 aa9.76□□□□□ -0.85
CALD1-218ENST00000478075 TK2O00142 265 aa9.73□□□□□ -0.85
CALD1-218ENST00000478075 STAC3Q96MF2 364 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms