RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 POTEGQ6S5H5 508 aa14.85□□□□□ -0.03
NCKAP1-204ENST00000477988 POTEJP0CG39 1038 aa14.84□□□□□ -0.03
NCKAP1-204ENST00000477988 SLC39A7Q92504 469 aa14.84□□□□□ -0.03
NCKAP1-204ENST00000477988 C7P10643 843 aa14.83□□□□□ -0.04
NCKAP1-204ENST00000477988 PROM2Q8N271 834 aa14.74□□□□□ -0.05
NCKAP1-204ENST00000477988 MAMSTRQ6ZN01 415 aa14.73□□□□□ -0.05
NCKAP1-204ENST00000477988 PCDH10Q9P2E7 1040 aa14.73□□□□□ -0.05
NCKAP1-204ENST00000477988 CCDC61Q9Y6R9 512 aa14.73□□□□□ -0.05
NCKAP1-204ENST00000477988 EHMT2Q96KQ7 1210 aa14.72□□□□□ -0.05
NCKAP1-204ENST00000477988 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
NCKAP1-204ENST00000477988 ATN1P54259 1190 aaPredicted RBP14.7□□□□□ -0.06
NCKAP1-204ENST00000477988 LCE2DQ5TA82 110 aaPredicted RBP14.67□□□□□ -0.06
NCKAP1-204ENST00000477988 KIF12Q96FN5 646 aa14.67□□□□□ -0.06
NCKAP1-204ENST00000477988 POTEFA5A3E0 1075 aa14.62□□□□□ -0.07
NCKAP1-204ENST00000477988 SCUBE2Q9NQ36 999 aa14.61□□□□□ -0.07
NCKAP1-204ENST00000477988 BMP2KQ9NSY1 1161 aaPredicted RBP14.61□□□□□ -0.07
NCKAP1-204ENST00000477988 TRPC6Q9Y210 931 aa14.59□□□□□ -0.07
NCKAP1-204ENST00000477988 FAM163AQ96GL9 167 aaPredicted RBP14.55□□□□□ -0.08
NCKAP1-204ENST00000477988 TIE1P35590 1138 aa14.54□□□□□ -0.08
NCKAP1-204ENST00000477988 MAP3K13O43283 966 aa14.53□□□□□ -0.08
NCKAP1-204ENST00000477988 RASEFQ8IZ41 740 aa14.49□□□□□ -0.09
NCKAP1-204ENST00000477988 COLQQ9Y215 455 aaPredicted RBP14.45□□□□□ -0.1
NCKAP1-204ENST00000477988 TTLL13PA6NNM8 815 aa14.44□□□□□ -0.1
NCKAP1-204ENST00000477988 PLEKHG5O94827 1062 aa14.43□□□□□ -0.1
NCKAP1-204ENST00000477988 MIER1Q8N108 512 aa14.43□□□□□ -0.1
NCKAP1-204ENST00000477988 SGIP1Q9BQI5 828 aa14.38□□□□□ -0.11
NCKAP1-204ENST00000477988 SEC24BO95487 1268 aa14.37□□□□□ -0.11
NCKAP1-204ENST00000477988 IER5LQ5T953 404 aa14.36□□□□□ -0.11
NCKAP1-204ENST00000477988 TRIM35Q9UPQ4 493 aa14.34□□□□□ -0.11
NCKAP1-204ENST00000477988 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
NCKAP1-204ENST00000477988 NUBP1P53384 320 aa14.27□□□□□ -0.13
NCKAP1-204ENST00000477988 CDAN1Q8IWY9 1227 aa14.27□□□□□ -0.13
NCKAP1-204ENST00000477988 PLCD3Q8N3E9 789 aa14.24□□□□□ -0.13
NCKAP1-204ENST00000477988 IFNL1Q8IU54 200 aa14.23□□□□□ -0.13
NCKAP1-204ENST00000477988 SLAIN1Q8ND83 568 aa14.2□□□□□ -0.14
NCKAP1-204ENST00000477988 ST18O60284 1047 aa14.19□□□□□ -0.14
NCKAP1-204ENST00000477988 ZBTB47Q9UFB7 747 aaPredicted RBP14.19□□□□□ -0.14
NCKAP1-204ENST00000477988 TMEM106CQ9BVX2 250 aa14.17□□□□□ -0.14
NCKAP1-204ENST00000477988 IRX5P78411 483 aaPredicted RBP14.15□□□□□ -0.14
NCKAP1-204ENST00000477988 PLCG2P16885 1265 aa14.13□□□□□ -0.15
NCKAP1-204ENST00000477988 FAM212AQ96EL1 285 aa14.12□□□□□ -0.15
NCKAP1-204ENST00000477988 OCEL1Q9H607 264 aa14.04□□□□□ -0.16
NCKAP1-204ENST00000477988 TMEM121BQ9BXQ6 578 aaPredicted RBP14.01□□□□□ -0.17
NCKAP1-204ENST00000477988 MMRN1Q13201 1228 aa13.97□□□□□ -0.17
NCKAP1-204ENST00000477988 SPNS2Q8IVW8 549 aa13.96□□□□□ -0.17
NCKAP1-204ENST00000477988 SNPHO15079 494 aa13.95□□□□□ -0.18
NCKAP1-204ENST00000477988 PYGBP11216 843 aa13.94□□□□□ -0.18
NCKAP1-204ENST00000477988 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.94□□□□□ -0.18
NCKAP1-204ENST00000477988 DCAF8Q5TAQ9 597 aa13.92□□□□□ -0.18
NCKAP1-204ENST00000477988 PCDHB8Q9UN66 801 aa13.91□□□□□ -0.18
NCKAP1-204ENST00000477988 MARVELD3Q96A59 401 aa13.87□□□□□ -0.19
NCKAP1-204ENST00000477988 PDCD7Q8N8D1 485 aaKnown RBP13.85□□□□□ -0.19
NCKAP1-204ENST00000477988 FKBP8Q14318 412 aa13.83□□□□□ -0.2
NCKAP1-204ENST00000477988 L3MBTL3Q96JM7 780 aaPredicted RBP13.76□□□□□ -0.21
NCKAP1-204ENST00000477988 C3orf67Q6ZVT6 689 aa13.75□□□□□ -0.21
NCKAP1-204ENST00000477988 ZNF467Q7Z7K2 595 aaPredicted RBP13.75□□□□□ -0.21
NCKAP1-204ENST00000477988 EMP3P54852 163 aa13.73□□□□□ -0.21
NCKAP1-204ENST00000477988 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
NCKAP1-204ENST00000477988 POTEB3A0JP26 581 aa13.72□□□□□ -0.21
NCKAP1-204ENST00000477988 POTEBQ6S5H4 581 aa13.72□□□□□ -0.21
NCKAP1-204ENST00000477988 KRTAP3-3Q9BYR6 98 aa13.71□□□□□ -0.21
NCKAP1-204ENST00000477988 KRTAP3-2Q9BYR7 98 aa13.71□□□□□ -0.21
NCKAP1-204ENST00000477988 CHRM1P11229 460 aaPredicted RBP13.7□□□□□ -0.22
NCKAP1-204ENST00000477988 GSE1Q14687 1217 aa13.7□□□□□ -0.22
NCKAP1-204ENST00000477988 FBXO3Q9UK99 471 aa13.7□□□□□ -0.22
NCKAP1-204ENST00000477988 GOLGA2Q08379 1002 aa13.69□□□□□ -0.22
NCKAP1-204ENST00000477988 ILDR1Q86SU0 546 aaPredicted RBP13.68□□□□□ -0.22
NCKAP1-204ENST00000477988 HS3ST6Q96QI5 342 aa13.68□□□□□ -0.22
NCKAP1-204ENST00000477988 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.224e-12■■□□□ 12
NCKAP1-204ENST00000477988 FAM205CA6NFA0 338 aa13.64□□□□□ -0.23
NCKAP1-204ENST00000477988 PSEN1P49768 467 aa13.64□□□□□ -0.23
NCKAP1-204ENST00000477988 KLHL34Q8N239 644 aa13.59□□□□□ -0.23
NCKAP1-204ENST00000477988 VASPP50552 380 aaPredicted RBP13.57□□□□□ -0.24
NCKAP1-204ENST00000477988 DPY19L2Q6NUT2 758 aa13.57□□□□□ -0.24
NCKAP1-204ENST00000477988 HOXB3P14651 431 aaPredicted RBP13.55□□□□□ -0.24
NCKAP1-204ENST00000477988 PDAP1Q13442 181 aaKnown RBP13.53□□□□□ -0.24
NCKAP1-204ENST00000477988 BOLA1Q9Y3E2 137 aa13.5□□□□□ -0.25
NCKAP1-204ENST00000477988 HOXB1P14653 301 aaPredicted RBP13.47□□□□□ -0.25
NCKAP1-204ENST00000477988 CABP2Q9NPB3 220 aa13.46□□□□□ -0.25
NCKAP1-204ENST00000477988 G3V3G9 751 aa13.43□□□□□ -0.26
NCKAP1-204ENST00000477988 DOK7Q18PE1 504 aa13.39□□□□□ -0.27
NCKAP1-204ENST00000477988 ZNF710Q8N1W2 664 aa13.39□□□□□ -0.27
NCKAP1-204ENST00000477988 ERBB3P21860 1342 aa13.38□□□□□ -0.27
NCKAP1-204ENST00000477988 SPOCK2Q92563 424 aa13.33□□□□□ -0.28
NCKAP1-204ENST00000477988 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
NCKAP1-204ENST00000477988 IFNLR1Q8IU57 520 aaPredicted RBP13.31□□□□□ -0.28
NCKAP1-204ENST00000477988 RNF166Q96A37 237 aaPredicted RBP13.31□□□□□ -0.28
NCKAP1-204ENST00000477988 VARS2Q5ST30 1063 aaKnown RBP13.29□□□□□ -0.28
NCKAP1-204ENST00000477988 RIMBP2O15034 1052 aa13.28□□□□□ -0.28
NCKAP1-204ENST00000477988 EFCAB3Q8N7B9 438 aa13.27□□□□□ -0.29
NCKAP1-204ENST00000477988 TMEM92Q6UXU6 159 aa13.26□□□□□ -0.29
NCKAP1-204ENST00000477988 ZSWIM6Q9HCJ5 1215 aa13.26□□□□□ -0.29
NCKAP1-204ENST00000477988 ZNF687Q8N1G0 1237 aa13.24□□□□□ -0.29
NCKAP1-204ENST00000477988 MYT1LQ9UL68 1186 aa13.23□□□□□ -0.29
NCKAP1-204ENST00000477988 GPR153Q6NV75 609 aa13.22□□□□□ -0.29
NCKAP1-204ENST00000477988 MICALL2Q8IY33 904 aa13.22□□□□□ -0.29
NCKAP1-204ENST00000477988 TRIM41Q8WV44 630 aa13.16□□□□□ -0.3
NCKAP1-204ENST00000477988 PTGER2P43116 358 aa13.14□□□□□ -0.31
NCKAP1-204ENST00000477988 MS4A4AQ96JQ5 239 aa13.13□□□□□ -0.31
NCKAP1-204ENST00000477988 SOX12O15370 315 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms