RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 PHF12Q96QT6 1004 aa14.57□□□□□ -0.08
USP33-208ENST00000477949 CECR2Q9BXF3 1484 aa14.56□□□□□ -0.08
USP33-208ENST00000477949 MIER1Q8N108 512 aa14.54□□□□□ -0.08
USP33-208ENST00000477949 CC2D2AQ9P2K1 1620 aa14.54□□□□□ -0.08
USP33-208ENST00000477949 MYO15BQ96JP2 1530 aa14.53□□□□□ -0.08
USP33-208ENST00000477949 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
USP33-208ENST00000477949 SHROOM4Q9ULL8 1493 aa14.46□□□□□ -0.09
USP33-208ENST00000477949 TSPYL2Q9H2G4 693 aaPredicted RBP14.46□□□□□ -0.09
USP33-208ENST00000477949 DCAF8L2P0C7V8 631 aa14.44□□□□□ -0.1
USP33-208ENST00000477949 FKBP8Q14318 412 aa14.44□□□□□ -0.1
USP33-208ENST00000477949 PLCD3Q8N3E9 789 aa14.4□□□□□ -0.1
USP33-208ENST00000477949 EIF4G1Q04637 1599 aaKnown RBP14.39□□□□□ -0.11
USP33-208ENST00000477949 CCDC61Q9Y6R9 512 aa14.38□□□□□ -0.11
USP33-208ENST00000477949 MS4A3Q96HJ5 214 aa14.37□□□□□ -0.11
USP33-208ENST00000477949 RASEFQ8IZ41 740 aa14.31□□□□□ -0.12
USP33-208ENST00000477949 KIF12Q96FN5 646 aa14.31□□□□□ -0.12
USP33-208ENST00000477949 ZBTB47Q9UFB7 747 aaPredicted RBP14.31□□□□□ -0.12
USP33-208ENST00000477949 PELP1Q8IZL8 1130 aaKnown RBP14.3□□□□□ -0.12
USP33-208ENST00000477949 ASTLQ6HA08 431 aaPredicted RBP14.29□□□□□ -0.12
USP33-208ENST00000477949 ATMINO43313 823 aaPredicted RBP14.27□□□□□ -0.13
USP33-208ENST00000477949 MAP3K13O43283 966 aa14.22□□□□□ -0.13
USP33-208ENST00000477949 POTEB2H3BUK9 544 aa14.21□□□□□ -0.13
USP33-208ENST00000477949 C7P10643 843 aa14.21□□□□□ -0.13
USP33-208ENST00000477949 NUBP1P53384 320 aa14.21□□□□□ -0.13
USP33-208ENST00000477949 SLC39A7Q92504 469 aa14.21□□□□□ -0.13
USP33-208ENST00000477949 FBXO3Q9UK99 471 aa14.2□□□□□ -0.14
USP33-208ENST00000477949 METRNQ9UJH8 293 aa14.17□□□□□ -0.14
USP33-208ENST00000477949 OTUD5Q96G74 571 aa14.16□□□□□ -0.14
USP33-208ENST00000477949 ATN1P54259 1190 aaPredicted RBP14.15□□□□□ -0.14
USP33-208ENST00000477949 SCRIBQ14160 1630 aa14.14□□□□□ -0.15
USP33-208ENST00000477949 SGIP1Q9BQI5 828 aa14.13□□□□□ -0.15
USP33-208ENST00000477949 DCAF1Q9Y4B6 1507 aa14.13□□□□□ -0.15
USP33-208ENST00000477949 CUX2O14529 1486 aa14.12□□□□□ -0.15
USP33-208ENST00000477949 TIE1P35590 1138 aa14.12□□□□□ -0.15
USP33-208ENST00000477949 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
USP33-208ENST00000477949 TRPC6Q9Y210 931 aa14.12□□□□□ -0.15
USP33-208ENST00000477949 FAM212AQ96EL1 285 aa14.11□□□□□ -0.15
USP33-208ENST00000477949 ZCCHC6Q5VYS8 1495 aaKnown RBP14.09□□□□□ -0.15
USP33-208ENST00000477949 PCDHB13Q9Y5F0 798 aa14.08□□□□□ -0.16
USP33-208ENST00000477949 TTLL13PA6NNM8 815 aa14.03□□□□□ -0.16
USP33-208ENST00000477949 DCAF8Q5TAQ9 597 aa14.03□□□□□ -0.16
USP33-208ENST00000477949 MAMSTRQ6ZN01 415 aa14.02□□□□□ -0.17
USP33-208ENST00000477949 POTEJP0CG39 1038 aa14□□□□□ -0.17
USP33-208ENST00000477949 IFNL1Q8IU54 200 aa13.99□□□□□ -0.17
USP33-208ENST00000477949 VASPP50552 380 aaPredicted RBP13.98□□□□□ -0.17
USP33-208ENST00000477949 TRIM41Q8WV44 630 aa13.98□□□□□ -0.17
USP33-208ENST00000477949 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
USP33-208ENST00000477949 POTEFA5A3E0 1075 aa13.96□□□□□ -0.17
USP33-208ENST00000477949 TRIM35Q9UPQ4 493 aa13.93□□□□□ -0.18
USP33-208ENST00000477949 SEC24BO95487 1268 aa13.92□□□□□ -0.18
USP33-208ENST00000477949 IER5LQ5T953 404 aa13.92□□□□□ -0.18
USP33-208ENST00000477949 SCUBE2Q9NQ36 999 aa13.91□□□□□ -0.18
USP33-208ENST00000477949 PYGBP11216 843 aa13.9□□□□□ -0.18
USP33-208ENST00000477949 TMEM106CQ9BVX2 250 aa13.9□□□□□ -0.18
USP33-208ENST00000477949 COLQQ9Y215 455 aaPredicted RBP13.89□□□□□ -0.19
USP33-208ENST00000477949 GSE1Q14687 1217 aa13.87□□□□□ -0.19
USP33-208ENST00000477949 ERCC6Q03468 1493 aa13.87□□□□□ -0.19
USP33-208ENST00000477949 PCDHB8Q9UN66 801 aa13.81□□□□□ -0.2
USP33-208ENST00000477949 CHRM1P11229 460 aaPredicted RBP13.77□□□□□ -0.21
USP33-208ENST00000477949 POTEMA6NI47 508 aa13.76□□□□□ -0.21
USP33-208ENST00000477949 PLCG2P16885 1265 aa13.75□□□□□ -0.21
USP33-208ENST00000477949 NCAPD3P42695 1498 aa13.74□□□□□ -0.21
USP33-208ENST00000477949 ZNF467Q7Z7K2 595 aaPredicted RBP13.74□□□□□ -0.21
USP33-208ENST00000477949 POTEGQ6S5H5 508 aa13.73□□□□□ -0.21
USP33-208ENST00000477949 IFNLR1Q8IU57 520 aaPredicted RBP13.73□□□□□ -0.21
USP33-208ENST00000477949 SPOCK2Q92563 424 aa13.73□□□□□ -0.21
USP33-208ENST00000477949 FAM163AQ96GL9 167 aaPredicted RBP13.73□□□□□ -0.21
USP33-208ENST00000477949 THOC2Q8NI27 1593 aaKnown RBP13.72□□□□□ -0.21
USP33-208ENST00000477949 IRX5P78411 483 aaPredicted RBP13.72□□□□□ -0.21
USP33-208ENST00000477949 NESP48681 1621 aa13.71□□□□□ -0.22
USP33-208ENST00000477949 OCEL1Q9H607 264 aa13.7□□□□□ -0.22
USP33-208ENST00000477949 PLSCR2Q9NRY7 297 aa13.65□□□□□ -0.22
USP33-208ENST00000477949 CIZ1Q9ULV3 898 aaPredicted RBP13.64□□□□□ -0.23
USP33-208ENST00000477949 LCE2DQ5TA82 110 aaPredicted RBP13.63□□□□□ -0.23
USP33-208ENST00000477949 SLAIN1Q8ND83 568 aa13.62□□□□□ -0.23
USP33-208ENST00000477949 ATAD2BQ9ULI0 1458 aa13.61□□□□□ -0.23
USP33-208ENST00000477949 PSEN1P49768 467 aa13.61□□□□□ -0.23
USP33-208ENST00000477949 PCDH10Q9P2E7 1040 aa13.61□□□□□ -0.23
USP33-208ENST00000477949 HMGXB3Q12766 1538 aa13.6□□□□□ -0.23
USP33-208ENST00000477949 GOLGA2Q08379 1002 aa13.6□□□□□ -0.23
USP33-208ENST00000477949 MKRN3Q13064 507 aaKnown RBP13.59□□□□□ -0.23
USP33-208ENST00000477949 PDAP1Q13442 181 aaKnown RBP13.56□□□□□ -0.24
USP33-208ENST00000477949 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.52□□□□□ -0.25
USP33-208ENST00000477949 SMARCA2P51531 1590 aa13.52□□□□□ -0.25
USP33-208ENST00000477949 PDCD7Q8N8D1 485 aaKnown RBP13.51□□□□□ -0.25
USP33-208ENST00000477949 KIF21AQ7Z4S6 1674 aa13.5□□□□□ -0.25
USP33-208ENST00000477949 LAMC3Q9Y6N6 1575 aa13.5□□□□□ -0.25
USP33-208ENST00000477949 L3MBTL3Q96JM7 780 aaPredicted RBP13.5□□□□□ -0.25
USP33-208ENST00000477949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.5□□□□□ -0.252e-6■■■□□ 15.3
USP33-208ENST00000477949 SMARCA4P51532 1647 aa13.47□□□□□ -0.25
USP33-208ENST00000477949 ST18O60284 1047 aa13.44□□□□□ -0.26
USP33-208ENST00000477949 SNPHO15079 494 aa13.43□□□□□ -0.26
USP33-208ENST00000477949 CABP2Q9NPB3 220 aa13.43□□□□□ -0.26
USP33-208ENST00000477949 ILDR1Q86SU0 546 aaPredicted RBP13.42□□□□□ -0.26
USP33-208ENST00000477949 BAZ1AQ9NRL2 1556 aaPredicted RBP13.41□□□□□ -0.26
USP33-208ENST00000477949 C3orf67Q6ZVT6 689 aa13.4□□□□□ -0.26
USP33-208ENST00000477949 BAZ1BQ9UIG0 1483 aaKnown RBP13.4□□□□□ -0.26
USP33-208ENST00000477949 PEG3Q9GZU2 1588 aa13.39□□□□□ -0.27
USP33-208ENST00000477949 WDR62O43379 1518 aa13.39□□□□□ -0.27
USP33-208ENST00000477949 PDS5BQ9NTI5 1447 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms