RNA–Protein interactions for RNA: ENST00000477876.1

NUP58-210, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-210ENST00000477876 RASEFQ8IZ41 740 aa13.4□□□□□ -0.26
NUP58-210ENST00000477876 TSPYL2Q9H2G4 693 aaPredicted RBP13.4□□□□□ -0.26
NUP58-210ENST00000477876 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
NUP58-210ENST00000477876 CLCN6P51797 869 aa13.36□□□□□ -0.27
NUP58-210ENST00000477876 POTEMA6NI47 508 aa13.33□□□□□ -0.28
NUP58-210ENST00000477876 SPOCK2Q92563 424 aa13.31□□□□□ -0.28
NUP58-210ENST00000477876 FAM212AQ96EL1 285 aa13.31□□□□□ -0.28
NUP58-210ENST00000477876 CCDC61Q9Y6R9 512 aa13.31□□□□□ -0.28
NUP58-210ENST00000477876 PHF12Q96QT6 1004 aa13.3□□□□□ -0.28
NUP58-210ENST00000477876 DCAF8Q5TAQ9 597 aa13.28□□□□□ -0.28
NUP58-210ENST00000477876 POTEGQ6S5H5 508 aa13.24□□□□□ -0.29
NUP58-210ENST00000477876 PCDH10Q9P2E7 1040 aa13.24□□□□□ -0.29
NUP58-210ENST00000477876 GSE1Q14687 1217 aa13.22□□□□□ -0.29
NUP58-210ENST00000477876 KIF12Q96FN5 646 aa13.21□□□□□ -0.29
NUP58-210ENST00000477876 GALR2O43603 387 aaPredicted RBP13.18□□□□□ -0.3
NUP58-210ENST00000477876 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
NUP58-210ENST00000477876 MAP3K13O43283 966 aa13.15□□□□□ -0.3
NUP58-210ENST00000477876 MS4A3Q96HJ5 214 aa13.14□□□□□ -0.31
NUP58-210ENST00000477876 CIZ1Q9ULV3 898 aaPredicted RBP13.14□□□□□ -0.31
NUP58-210ENST00000477876 DCBLD2Q96PD2 775 aa13.13□□□□□ -0.31
NUP58-210ENST00000477876 SGIP1Q9BQI5 828 aa13.12□□□□□ -0.31
NUP58-210ENST00000477876 PYGBP11216 843 aa13.11□□□□□ -0.31
NUP58-210ENST00000477876 PCDHB13Q9Y5F0 798 aa13.09□□□□□ -0.31
NUP58-210ENST00000477876 CHRM1P11229 460 aaPredicted RBP13.07□□□□□ -0.32
NUP58-210ENST00000477876 IFNL1Q8IU54 200 aa13.02□□□□□ -0.33
NUP58-210ENST00000477876 TRIM41Q8WV44 630 aa13□□□□□ -0.33
NUP58-210ENST00000477876 TRPC6Q9Y210 931 aa12.98□□□□□ -0.33
NUP58-210ENST00000477876 POTEB2H3BUK9 544 aa12.96□□□□□ -0.33
NUP58-210ENST00000477876 TIE1P35590 1138 aa12.96□□□□□ -0.33
NUP58-210ENST00000477876 ASTLQ6HA08 431 aaPredicted RBP12.96□□□□□ -0.33
NUP58-210ENST00000477876 PCDHB8Q9UN66 801 aa12.96□□□□□ -0.33
NUP58-210ENST00000477876 ATMINO43313 823 aaPredicted RBP12.95□□□□□ -0.34
NUP58-210ENST00000477876 ZNF467Q7Z7K2 595 aaPredicted RBP12.95□□□□□ -0.34
NUP58-210ENST00000477876 ABCC9O60706 1549 aa12.94□□□□□ -0.34
NUP58-210ENST00000477876 BMP2KQ9NSY1 1161 aaPredicted RBP12.93□□□□□ -0.34
NUP58-210ENST00000477876 ATN1P54259 1190 aaPredicted RBP12.9□□□□□ -0.34
NUP58-210ENST00000477876 TTLL13PA6NNM8 815 aa12.89□□□□□ -0.35
NUP58-210ENST00000477876 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
NUP58-210ENST00000477876 PKD2Q13563 968 aa12.87□□□□□ -0.35
NUP58-210ENST00000477876 TMEM106CQ9BVX2 250 aa12.87□□□□□ -0.35
NUP58-210ENST00000477876 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
NUP58-210ENST00000477876 SLC39A7Q92504 469 aa12.83□□□□□ -0.36
NUP58-210ENST00000477876 PSEN1P49768 467 aa12.82□□□□□ -0.36
NUP58-210ENST00000477876 C7P10643 843 aa12.81□□□□□ -0.36
NUP58-210ENST00000477876 PDAP1Q13442 181 aaKnown RBP12.81□□□□□ -0.36
NUP58-210ENST00000477876 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
NUP58-210ENST00000477876 RIOK3O14730 519 aaKnown RBP12.79□□□□□ -0.36
NUP58-210ENST00000477876 RNF25Q96BH1 459 aaPredicted RBP12.79□□□□□ -0.36
NUP58-210ENST00000477876 METRNQ9UJH8 293 aa12.78□□□□□ -0.36
NUP58-210ENST00000477876 LCE2DQ5TA82 110 aaPredicted RBP12.77□□□□□ -0.37
NUP58-210ENST00000477876 CCDC180Q9P1Z9 1646 aa12.76□□□□□ -0.37
NUP58-210ENST00000477876 IER5LQ5T953 404 aa12.73□□□□□ -0.37
NUP58-210ENST00000477876 VGFO15240 615 aaPredicted RBP12.72□□□□□ -0.37
NUP58-210ENST00000477876 TAOK2Q9UL54 1235 aa12.72□□□□□ -0.37
NUP58-210ENST00000477876 RGL2O15211 777 aa12.71□□□□□ -0.37
NUP58-210ENST00000477876 GOLGA2Q08379 1002 aa12.69□□□□□ -0.38
NUP58-210ENST00000477876 SEC24BO95487 1268 aa12.68□□□□□ -0.38
NUP58-210ENST00000477876 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.66□□□□□ -0.38
NUP58-210ENST00000477876 POTEFA5A3E0 1075 aa12.66□□□□□ -0.38
NUP58-210ENST00000477876 MKRN3Q13064 507 aaKnown RBP12.66□□□□□ -0.38
NUP58-210ENST00000477876 ZFP91Q96JP5 570 aaPredicted RBP12.66□□□□□ -0.38
NUP58-210ENST00000477876 CABP2Q9NPB3 220 aa12.65□□□□□ -0.38
NUP58-210ENST00000477876 COLQQ9Y215 455 aaPredicted RBP12.65□□□□□ -0.38
NUP58-210ENST00000477876 IRX5P78411 483 aaPredicted RBP12.63□□□□□ -0.39
NUP58-210ENST00000477876 MAMSTRQ6ZN01 415 aa12.63□□□□□ -0.39
NUP58-210ENST00000477876 PLCG2P16885 1265 aa12.61□□□□□ -0.39
NUP58-210ENST00000477876 FAM163AQ96GL9 167 aaPredicted RBP12.61□□□□□ -0.39
NUP58-210ENST00000477876 OCEL1Q9H607 264 aa12.61□□□□□ -0.39
NUP58-210ENST00000477876 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
NUP58-210ENST00000477876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.42e-8■□□□□ 10.1
NUP58-210ENST00000477876 STK25O00506 426 aa12.56□□□□□ -0.4
NUP58-210ENST00000477876 EFCAB3Q8N7B9 438 aa12.56□□□□□ -0.4
NUP58-210ENST00000477876 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
NUP58-210ENST00000477876 STK24Q9Y6E0 443 aa12.55□□□□□ -0.4
NUP58-210ENST00000477876 AMER1Q5JTC6 1135 aaPredicted RBP12.54□□□□□ -0.4
NUP58-210ENST00000477876 ILDR1Q86SU0 546 aaPredicted RBP12.52□□□□□ -0.41
NUP58-210ENST00000477876 CDAN1Q8IWY9 1227 aa12.52□□□□□ -0.41
NUP58-210ENST00000477876 SOX12O15370 315 aa12.51□□□□□ -0.41
NUP58-210ENST00000477876 PDCD7Q8N8D1 485 aaKnown RBP12.51□□□□□ -0.41
NUP58-210ENST00000477876 SCUBE2Q9NQ36 999 aa12.48□□□□□ -0.41
NUP58-210ENST00000477876 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
NUP58-210ENST00000477876 CHGAP10645 457 aaKnown RBP12.45□□□□□ -0.42
NUP58-210ENST00000477876 HS6ST3Q8IZP7 471 aa12.44□□□□□ -0.42
NUP58-210ENST00000477876 L3MBTL3Q96JM7 780 aaPredicted RBP12.44□□□□□ -0.42
NUP58-210ENST00000477876 DPY19L2Q6NUT2 758 aa12.43□□□□□ -0.42
NUP58-210ENST00000477876 PHF8Q9UPP1 1060 aa12.42□□□□□ -0.42
NUP58-210ENST00000477876 DCAF8L2P0C7V8 631 aa12.4□□□□□ -0.42
NUP58-210ENST00000477876 NLRP6P59044 892 aa12.4□□□□□ -0.42
NUP58-210ENST00000477876 MFRPQ9BY79 579 aa12.38□□□□□ -0.43
NUP58-210ENST00000477876 MS4A4AQ96JQ5 239 aa12.37□□□□□ -0.43
NUP58-210ENST00000477876 FBXO22Q8NEZ5 403 aa12.36□□□□□ -0.43
NUP58-210ENST00000477876 BOLA1Q9Y3E2 137 aa12.36□□□□□ -0.43
NUP58-210ENST00000477876 G3V3G9 751 aa12.35□□□□□ -0.43
NUP58-210ENST00000477876 MMRN1Q13201 1228 aa12.34□□□□□ -0.43
NUP58-210ENST00000477876 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.34□□□□□ -0.43
NUP58-210ENST00000477876 DNAJC5Q9H3Z4 198 aa12.33□□□□□ -0.44
NUP58-210ENST00000477876 C3orf67Q6ZVT6 689 aa12.31□□□□□ -0.44
NUP58-210ENST00000477876 TMEM121BQ9BXQ6 578 aaPredicted RBP12.3□□□□□ -0.44
NUP58-210ENST00000477876 SLAIN1Q8ND83 568 aa12.29□□□□□ -0.44
NUP58-210ENST00000477876 NKX1-1Q15270 411 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms