RNA–Protein interactions for RNA: ENST00000477872.1

TMF1-202, Transcript of TATA element modulatory factor 1, humanhuman

TSL 3

Gene TMF1, Length 222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-202ENST00000477872 C7P10643 843 aa7.7□□□□□ -1.18
TMF1-202ENST00000477872 SLC39A7Q92504 469 aa7.7□□□□□ -1.18
TMF1-202ENST00000477872 TSPYL2Q9H2G4 693 aaPredicted RBP7.7□□□□□ -1.18
TMF1-202ENST00000477872 METRNQ9UJH8 293 aa7.68□□□□□ -1.18
TMF1-202ENST00000477872 PLEKHG5O94827 1062 aa7.67□□□□□ -1.18
TMF1-202ENST00000477872 CCDC61Q9Y6R9 512 aa7.67□□□□□ -1.18
TMF1-202ENST00000477872 MAMSTRQ6ZN01 415 aa7.65□□□□□ -1.18
TMF1-202ENST00000477872 MIER1Q8N108 512 aa7.64□□□□□ -1.19
TMF1-202ENST00000477872 KIF12Q96FN5 646 aa7.64□□□□□ -1.19
TMF1-202ENST00000477872 POTEMA6NI47 508 aa7.61□□□□□ -1.19
TMF1-202ENST00000477872 ATN1P54259 1190 aaPredicted RBP7.61□□□□□ -1.19
TMF1-202ENST00000477872 POTEJP0CG39 1038 aa7.6□□□□□ -1.19
TMF1-202ENST00000477872 POTEGQ6S5H5 508 aa7.59□□□□□ -1.19
TMF1-202ENST00000477872 MAP3K13O43283 966 aa7.58□□□□□ -1.2
TMF1-202ENST00000477872 TIE1P35590 1138 aa7.58□□□□□ -1.2
TMF1-202ENST00000477872 BMP2KQ9NSY1 1161 aaPredicted RBP7.58□□□□□ -1.2
TMF1-202ENST00000477872 RASEFQ8IZ41 740 aa7.57□□□□□ -1.2
TMF1-202ENST00000477872 SCUBE2Q9NQ36 999 aa7.57□□□□□ -1.2
TMF1-202ENST00000477872 PCDH10Q9P2E7 1040 aa7.57□□□□□ -1.2
TMF1-202ENST00000477872 PLCD3Q8N3E9 789 aa7.56□□□□□ -1.2
TMF1-202ENST00000477872 TRPC6Q9Y210 931 aa7.55□□□□□ -1.2
TMF1-202ENST00000477872 SGIP1Q9BQI5 828 aa7.54□□□□□ -1.2
TMF1-202ENST00000477872 ZBTB47Q9UFB7 747 aaPredicted RBP7.54□□□□□ -1.2
TMF1-202ENST00000477872 POTEFA5A3E0 1075 aa7.53□□□□□ -1.2
TMF1-202ENST00000477872 TTLL13PA6NNM8 815 aa7.51□□□□□ -1.21
TMF1-202ENST00000477872 FAM163AQ96GL9 167 aaPredicted RBP7.51□□□□□ -1.21
TMF1-202ENST00000477872 SEC24BO95487 1268 aa7.5□□□□□ -1.21
TMF1-202ENST00000477872 NUBP1P53384 320 aa7.49□□□□□ -1.21
TMF1-202ENST00000477872 PCDHB13Q9Y5F0 798 aa7.49□□□□□ -1.21
TMF1-202ENST00000477872 IER5LQ5T953 404 aa7.48□□□□□ -1.21
TMF1-202ENST00000477872 COLQQ9Y215 455 aaPredicted RBP7.47□□□□□ -1.21
TMF1-202ENST00000477872 LCE2DQ5TA82 110 aaPredicted RBP7.46□□□□□ -1.22
TMF1-202ENST00000477872 TRIM35Q9UPQ4 493 aa7.46□□□□□ -1.22
TMF1-202ENST00000477872 FAM212AQ96EL1 285 aa7.45□□□□□ -1.22
TMF1-202ENST00000477872 IFNL1Q8IU54 200 aa7.43□□□□□ -1.22
TMF1-202ENST00000477872 TMEM106CQ9BVX2 250 aa7.41□□□□□ -1.22
TMF1-202ENST00000477872 FKBP8Q14318 412 aa7.4□□□□□ -1.22
TMF1-202ENST00000477872 PLCG2P16885 1265 aa7.38□□□□□ -1.23
TMF1-202ENST00000477872 DCAF8Q5TAQ9 597 aa7.37□□□□□ -1.23
TMF1-202ENST00000477872 SLAIN1Q8ND83 568 aa7.37□□□□□ -1.23
TMF1-202ENST00000477872 FBXO3Q9UK99 471 aa7.36□□□□□ -1.23
TMF1-202ENST00000477872 IRX5P78411 483 aaPredicted RBP7.35□□□□□ -1.23
TMF1-202ENST00000477872 OCEL1Q9H607 264 aa7.34□□□□□ -1.23
TMF1-202ENST00000477872 PYGBP11216 843 aa7.33□□□□□ -1.24
TMF1-202ENST00000477872 CDAN1Q8IWY9 1227 aa7.33□□□□□ -1.24
TMF1-202ENST00000477872 ST18O60284 1047 aa7.31□□□□□ -1.24
TMF1-202ENST00000477872 PCDHB8Q9UN66 801 aa7.29□□□□□ -1.24
TMF1-202ENST00000477872 SNPHO15079 494 aa7.28□□□□□ -1.24
TMF1-202ENST00000477872 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.28□□□□□ -1.24
TMF1-202ENST00000477872 GSE1Q14687 1217 aa7.27□□□□□ -1.25
TMF1-202ENST00000477872 ZNF467Q7Z7K2 595 aaPredicted RBP7.26□□□□□ -1.25
TMF1-202ENST00000477872 KLHL34Q8N239 644 aa7.26□□□□□ -1.25
TMF1-202ENST00000477872 TMEM121BQ9BXQ6 578 aaPredicted RBP7.26□□□□□ -1.25
TMF1-202ENST00000477872 CHRM1P11229 460 aaPredicted RBP7.24□□□□□ -1.25
TMF1-202ENST00000477872 VASPP50552 380 aaPredicted RBP7.23□□□□□ -1.25
TMF1-202ENST00000477872 MKRN3Q13064 507 aaKnown RBP7.23□□□□□ -1.25
TMF1-202ENST00000477872 GOLGA2Q08379 1002 aa7.22□□□□□ -1.25
TMF1-202ENST00000477872 L3MBTL3Q96JM7 780 aaPredicted RBP7.22□□□□□ -1.25
TMF1-202ENST00000477872 PDCD7Q8N8D1 485 aaKnown RBP7.2□□□□□ -1.26
TMF1-202ENST00000477872 C3orf67Q6ZVT6 689 aa7.19□□□□□ -1.26
TMF1-202ENST00000477872 PSEN1P49768 467 aa7.18□□□□□ -1.26
TMF1-202ENST00000477872 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.18□□□□□ -1.262e-7■■■■□ 20.4
TMF1-202ENST00000477872 SPNS2Q8IVW8 549 aa7.16□□□□□ -1.26
TMF1-202ENST00000477872 MARVELD3Q96A59 401 aa7.16□□□□□ -1.26
TMF1-202ENST00000477872 MMRN1Q13201 1228 aa7.15□□□□□ -1.26
TMF1-202ENST00000477872 PDAP1Q13442 181 aaKnown RBP7.14□□□□□ -1.27
TMF1-202ENST00000477872 ILDR1Q86SU0 546 aaPredicted RBP7.13□□□□□ -1.27
TMF1-202ENST00000477872 SPOCK2Q92563 424 aa7.12□□□□□ -1.27
TMF1-202ENST00000477872 EMP3P54852 163 aa7.11□□□□□ -1.27
TMF1-202ENST00000477872 CIZ1Q9ULV3 898 aaPredicted RBP7.1□□□□□ -1.27
TMF1-202ENST00000477872 G3V3G9 751 aa7.09□□□□□ -1.27
TMF1-202ENST00000477872 DPY19L2Q6NUT2 758 aa7.08□□□□□ -1.28
TMF1-202ENST00000477872 CABP2Q9NPB3 220 aa7.08□□□□□ -1.28
TMF1-202ENST00000477872 FAM205CA6NFA0 338 aa7.07□□□□□ -1.28
TMF1-202ENST00000477872 IFNLR1Q8IU57 520 aaPredicted RBP7.07□□□□□ -1.28
TMF1-202ENST00000477872 HS3ST6Q96QI5 342 aa7.07□□□□□ -1.28
TMF1-202ENST00000477872 BOLA1Q9Y3E2 137 aa7.07□□□□□ -1.28
TMF1-202ENST00000477872 POTEB3A0JP26 581 aa7.04□□□□□ -1.28
TMF1-202ENST00000477872 POTEBQ6S5H4 581 aa7.04□□□□□ -1.28
TMF1-202ENST00000477872 TRIM41Q8WV44 630 aa7.03□□□□□ -1.28
TMF1-202ENST00000477872 KRTAP3-3Q9BYR6 98 aa7.03□□□□□ -1.28
TMF1-202ENST00000477872 KRTAP3-2Q9BYR7 98 aa7.03□□□□□ -1.28
TMF1-202ENST00000477872 HOXB3P14651 431 aaPredicted RBP7.02□□□□□ -1.29
TMF1-202ENST00000477872 ZNF710Q8N1W2 664 aa7.01□□□□□ -1.29
TMF1-202ENST00000477872 HOXB1P14653 301 aaPredicted RBP7□□□□□ -1.29
TMF1-202ENST00000477872 DOK7Q18PE1 504 aa7□□□□□ -1.29
TMF1-202ENST00000477872 EFCAB3Q8N7B9 438 aa6.99□□□□□ -1.29
TMF1-202ENST00000477872 RIMBP2O15034 1052 aa6.97□□□□□ -1.29
TMF1-202ENST00000477872 ERBB3P21860 1342 aa6.96□□□□□ -1.3
TMF1-202ENST00000477872 SOX12O15370 315 aa6.95□□□□□ -1.3
TMF1-202ENST00000477872 ZSWIM6Q9HCJ5 1215 aa6.93□□□□□ -1.3
TMF1-202ENST00000477872 MICALL2Q8IY33 904 aa6.92□□□□□ -1.3
TMF1-202ENST00000477872 RIOK3O14730 519 aaKnown RBP6.91□□□□□ -1.3
TMF1-202ENST00000477872 VARS2Q5ST30 1063 aaKnown RBP6.9□□□□□ -1.3
TMF1-202ENST00000477872 TMEM92Q6UXU6 159 aa6.9□□□□□ -1.3
TMF1-202ENST00000477872 VGFO15240 615 aaPredicted RBP6.89□□□□□ -1.31
TMF1-202ENST00000477872 ZNF687Q8N1G0 1237 aa6.89□□□□□ -1.31
TMF1-202ENST00000477872 GPR153Q6NV75 609 aa6.88□□□□□ -1.31
TMF1-202ENST00000477872 MS4A4AQ96JQ5 239 aa6.88□□□□□ -1.31
TMF1-202ENST00000477872 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms