RNA–Protein interactions for RNA: ENST00000477721.1

GFM1-205, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-205ENST00000477721 TSPYL2Q9H2G4 693 aaPredicted RBP10.73□□□□□ -0.69
GFM1-205ENST00000477721 PELP1Q8IZL8 1130 aaKnown RBP10.72□□□□□ -0.69
GFM1-205ENST00000477721 RTN4Q9NQC3 1192 aaKnown RBP10.72□□□□□ -0.69
GFM1-205ENST00000477721 CCDC61Q9Y6R9 512 aa10.71□□□□□ -0.69
GFM1-205ENST00000477721 MS4A3Q96HJ5 214 aa10.7□□□□□ -0.7
GFM1-205ENST00000477721 POTEB2H3BUK9 544 aa10.68□□□□□ -0.7
GFM1-205ENST00000477721 KIF12Q96FN5 646 aa10.66□□□□□ -0.7
GFM1-205ENST00000477721 ASTLQ6HA08 431 aaPredicted RBP10.65□□□□□ -0.7
GFM1-205ENST00000477721 RASEFQ8IZ41 740 aa10.65□□□□□ -0.7
GFM1-205ENST00000477721 ATMINO43313 823 aaPredicted RBP10.64□□□□□ -0.71
GFM1-205ENST00000477721 PLEKHG5O94827 1062 aa10.64□□□□□ -0.71
GFM1-205ENST00000477721 AMER1Q5JTC6 1135 aaPredicted RBP10.64□□□□□ -0.71
GFM1-205ENST00000477721 POTEMA6NI47 508 aa10.62□□□□□ -0.71
GFM1-205ENST00000477721 OTUD5Q96G74 571 aa10.62□□□□□ -0.71
GFM1-205ENST00000477721 PLCD3Q8N3E9 789 aa10.61□□□□□ -0.71
GFM1-205ENST00000477721 MAP3K13O43283 966 aa10.58□□□□□ -0.72
GFM1-205ENST00000477721 NUBP1P53384 320 aa10.57□□□□□ -0.72
GFM1-205ENST00000477721 TRPC6Q9Y210 931 aa10.57□□□□□ -0.72
GFM1-205ENST00000477721 POTEGQ6S5H5 508 aa10.56□□□□□ -0.72
GFM1-205ENST00000477721 C7P10643 843 aa10.55□□□□□ -0.72
GFM1-205ENST00000477721 ATN1P54259 1190 aaPredicted RBP10.55□□□□□ -0.72
GFM1-205ENST00000477721 METRNQ9UJH8 293 aa10.55□□□□□ -0.72
GFM1-205ENST00000477721 POTEJP0CG39 1038 aa10.54□□□□□ -0.72
GFM1-205ENST00000477721 SLC39A7Q92504 469 aa10.54□□□□□ -0.72
GFM1-205ENST00000477721 BMP2KQ9NSY1 1161 aaPredicted RBP10.52□□□□□ -0.73
GFM1-205ENST00000477721 ZBTB47Q9UFB7 747 aaPredicted RBP10.5□□□□□ -0.73
GFM1-205ENST00000477721 POTEFA5A3E0 1075 aa10.47□□□□□ -0.73
GFM1-205ENST00000477721 TIE1P35590 1138 aa10.47□□□□□ -0.73
GFM1-205ENST00000477721 SGIP1Q9BQI5 828 aa10.46□□□□□ -0.73
GFM1-205ENST00000477721 TTLL13PA6NNM8 815 aa10.44□□□□□ -0.74
GFM1-205ENST00000477721 PCDHB13Q9Y5F0 798 aa10.43□□□□□ -0.74
GFM1-205ENST00000477721 IFNL1Q8IU54 200 aa10.41□□□□□ -0.74
GFM1-205ENST00000477721 FBXO3Q9UK99 471 aa10.41□□□□□ -0.74
GFM1-205ENST00000477721 FAM212AQ96EL1 285 aa10.4□□□□□ -0.74
GFM1-205ENST00000477721 COLQQ9Y215 455 aaPredicted RBP10.38□□□□□ -0.75
GFM1-205ENST00000477721 MAMSTRQ6ZN01 415 aa10.37□□□□□ -0.75
GFM1-205ENST00000477721 DCAF8Q5TAQ9 597 aa10.36□□□□□ -0.75
GFM1-205ENST00000477721 TRIM35Q9UPQ4 493 aa10.35□□□□□ -0.75
GFM1-205ENST00000477721 IER5LQ5T953 404 aa10.32□□□□□ -0.76
GFM1-205ENST00000477721 PYGBP11216 843 aa10.31□□□□□ -0.76
GFM1-205ENST00000477721 VASPP50552 380 aaPredicted RBP10.31□□□□□ -0.76
GFM1-205ENST00000477721 TMEM106CQ9BVX2 250 aa10.31□□□□□ -0.76
GFM1-205ENST00000477721 RB1CC1Q8TDY2 1594 aa10.31□□□□□ -0.76
GFM1-205ENST00000477721 SEC24BO95487 1268 aa10.3□□□□□ -0.76
GFM1-205ENST00000477721 SCUBE2Q9NQ36 999 aa10.29□□□□□ -0.76
GFM1-205ENST00000477721 PCDH10Q9P2E7 1040 aa10.29□□□□□ -0.76
GFM1-205ENST00000477721 LCE2DQ5TA82 110 aaPredicted RBP10.27□□□□□ -0.77
GFM1-205ENST00000477721 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
GFM1-205ENST00000477721 PCDHB8Q9UN66 801 aa10.26□□□□□ -0.77
GFM1-205ENST00000477721 UNC13AQ9UPW8 1703 aa10.25□□□□□ -0.77
GFM1-205ENST00000477721 IRX5P78411 483 aaPredicted RBP10.23□□□□□ -0.77
GFM1-205ENST00000477721 FAM163AQ96GL9 167 aaPredicted RBP10.23□□□□□ -0.77
GFM1-205ENST00000477721 GSE1Q14687 1217 aa10.21□□□□□ -0.77
GFM1-205ENST00000477721 NACADO15069 1562 aa10.21□□□□□ -0.78
GFM1-205ENST00000477721 CHRM1P11229 460 aaPredicted RBP10.2□□□□□ -0.78
GFM1-205ENST00000477721 IFNLR1Q8IU57 520 aaPredicted RBP10.19□□□□□ -0.78
GFM1-205ENST00000477721 DCAF8L2P0C7V8 631 aa10.17□□□□□ -0.78
GFM1-205ENST00000477721 PLCG2P16885 1265 aa10.17□□□□□ -0.78
GFM1-205ENST00000477721 OCEL1Q9H607 264 aa10.17□□□□□ -0.78
GFM1-205ENST00000477721 BICRAQ9NZM4 1560 aa10.15□□□□□ -0.78
GFM1-205ENST00000477721 ZNF467Q7Z7K2 595 aaPredicted RBP10.13□□□□□ -0.79
GFM1-205ENST00000477721 SLAIN1Q8ND83 568 aa10.12□□□□□ -0.79
GFM1-205ENST00000477721 SPOCK2Q92563 424 aa10.11□□□□□ -0.79
GFM1-205ENST00000477721 PSEN1P49768 467 aa10.08□□□□□ -0.8
GFM1-205ENST00000477721 PDCD7Q8N8D1 485 aaKnown RBP10.07□□□□□ -0.8
GFM1-205ENST00000477721 CIZ1Q9ULV3 898 aaPredicted RBP10.05□□□□□ -0.8
GFM1-205ENST00000477721 ST18O60284 1047 aa10.03□□□□□ -0.8
GFM1-205ENST00000477721 MKRN3Q13064 507 aaKnown RBP10.02□□□□□ -0.81
GFM1-205ENST00000477721 PDAP1Q13442 181 aaKnown RBP10.01□□□□□ -0.81
GFM1-205ENST00000477721 ILDR1Q86SU0 546 aaPredicted RBP10.01□□□□□ -0.81
GFM1-205ENST00000477721 CDAN1Q8IWY9 1227 aa10.01□□□□□ -0.81
GFM1-205ENST00000477721 MYO15BQ96JP2 1530 aa10.01□□□□□ -0.81
GFM1-205ENST00000477721 GOLGA2Q08379 1002 aa10□□□□□ -0.81
GFM1-205ENST00000477721 EIF2AK3Q9NZJ5 1116 aaKnown RBP10□□□□□ -0.81
GFM1-205ENST00000477721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.99□□□□□ -0.817e-7■■■□□ 14.8
GFM1-205ENST00000477721 L3MBTL3Q96JM7 780 aaPredicted RBP9.97□□□□□ -0.81
GFM1-205ENST00000477721 DPY19L2Q6NUT2 758 aa9.96□□□□□ -0.82
GFM1-205ENST00000477721 ZCCHC6Q5VYS8 1495 aaKnown RBP9.96□□□□□ -0.82
GFM1-205ENST00000477721 CABP2Q9NPB3 220 aa9.94□□□□□ -0.82
GFM1-205ENST00000477721 SCRIBQ14160 1630 aa9.92□□□□□ -0.82
GFM1-205ENST00000477721 SNPHO15079 494 aa9.91□□□□□ -0.82
GFM1-205ENST00000477721 CC2D2AQ9P2K1 1620 aa9.9□□□□□ -0.82
GFM1-205ENST00000477721 C3orf67Q6ZVT6 689 aa9.89□□□□□ -0.83
GFM1-205ENST00000477721 TRIM41Q8WV44 630 aa9.89□□□□□ -0.83
GFM1-205ENST00000477721 TMEM121BQ9BXQ6 578 aaPredicted RBP9.89□□□□□ -0.83
GFM1-205ENST00000477721 DCAF1Q9Y4B6 1507 aa9.88□□□□□ -0.83
GFM1-205ENST00000477721 MMRN1Q13201 1228 aa9.85□□□□□ -0.83
GFM1-205ENST00000477721 EFCAB3Q8N7B9 438 aa9.85□□□□□ -0.83
GFM1-205ENST00000477721 MARVELD3Q96A59 401 aa9.85□□□□□ -0.83
GFM1-205ENST00000477721 CECR2Q9BXF3 1484 aa9.85□□□□□ -0.83
GFM1-205ENST00000477721 BOLA1Q9Y3E2 137 aa9.84□□□□□ -0.83
GFM1-205ENST00000477721 EIF4G1Q04637 1599 aaKnown RBP9.84□□□□□ -0.83
GFM1-205ENST00000477721 RNF25Q96BH1 459 aaPredicted RBP9.83□□□□□ -0.84
GFM1-205ENST00000477721 PLCB2Q00722 1185 aa9.8□□□□□ -0.84
GFM1-205ENST00000477721 RIOK3O14730 519 aaKnown RBP9.79□□□□□ -0.84
GFM1-205ENST00000477721 SHROOM4Q9ULL8 1493 aa9.79□□□□□ -0.84
GFM1-205ENST00000477721 POTEB3A0JP26 581 aa9.78□□□□□ -0.84
GFM1-205ENST00000477721 POTEBQ6S5H4 581 aa9.78□□□□□ -0.84
GFM1-205ENST00000477721 SPNS2Q8IVW8 549 aa9.78□□□□□ -0.84
GFM1-205ENST00000477721 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms