RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 ATMINO43313 823 aaPredicted RBP14.25□□□□□ -0.13
PIKFYVE-209ENST00000477200 MIER1Q8N108 512 aa14.24□□□□□ -0.13
PIKFYVE-209ENST00000477200 KIF12Q96FN5 646 aa14.2□□□□□ -0.14
PIKFYVE-209ENST00000477200 METRNQ9UJH8 293 aa14.19□□□□□ -0.14
PIKFYVE-209ENST00000477200 RASEFQ8IZ41 740 aa14.17□□□□□ -0.14
PIKFYVE-209ENST00000477200 PLEKHG5O94827 1062 aa14.16□□□□□ -0.14
PIKFYVE-209ENST00000477200 SLC39A7Q92504 469 aa14.15□□□□□ -0.14
PIKFYVE-209ENST00000477200 C7P10643 843 aa14.14□□□□□ -0.15
PIKFYVE-209ENST00000477200 ATN1P54259 1190 aaPredicted RBP14.14□□□□□ -0.15
PIKFYVE-209ENST00000477200 TRPC6Q9Y210 931 aa14.13□□□□□ -0.15
PIKFYVE-209ENST00000477200 POTEJP0CG39 1038 aa14.12□□□□□ -0.15
PIKFYVE-209ENST00000477200 MAP3K13O43283 966 aa14.11□□□□□ -0.15
PIKFYVE-209ENST00000477200 PLCD3Q8N3E9 789 aa14.08□□□□□ -0.16
PIKFYVE-209ENST00000477200 BMP2KQ9NSY1 1161 aaPredicted RBP14.07□□□□□ -0.16
PIKFYVE-209ENST00000477200 POTEFA5A3E0 1075 aa14.02□□□□□ -0.17
PIKFYVE-209ENST00000477200 FKBP8Q14318 412 aa14.02□□□□□ -0.17
PIKFYVE-209ENST00000477200 NUBP1P53384 320 aa14.01□□□□□ -0.17
PIKFYVE-209ENST00000477200 TIE1P35590 1138 aa14□□□□□ -0.17
PIKFYVE-209ENST00000477200 PLSCR2Q9NRY7 297 aa13.96□□□□□ -0.17
PIKFYVE-209ENST00000477200 TTLL13PA6NNM8 815 aa13.95□□□□□ -0.18
PIKFYVE-209ENST00000477200 MAMSTRQ6ZN01 415 aa13.95□□□□□ -0.18
PIKFYVE-209ENST00000477200 POTEMA6NI47 508 aa13.94□□□□□ -0.18
PIKFYVE-209ENST00000477200 ZBTB47Q9UFB7 747 aaPredicted RBP13.94□□□□□ -0.18
PIKFYVE-209ENST00000477200 PCDHB13Q9Y5F0 798 aa13.92□□□□□ -0.18
PIKFYVE-209ENST00000477200 SGIP1Q9BQI5 828 aa13.91□□□□□ -0.18
PIKFYVE-209ENST00000477200 POTEGQ6S5H5 508 aa13.9□□□□□ -0.18
PIKFYVE-209ENST00000477200 COLQQ9Y215 455 aaPredicted RBP13.89□□□□□ -0.19
PIKFYVE-209ENST00000477200 SCUBE2Q9NQ36 999 aa13.87□□□□□ -0.19
PIKFYVE-209ENST00000477200 IFNL1Q8IU54 200 aa13.86□□□□□ -0.19
PIKFYVE-209ENST00000477200 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
PIKFYVE-209ENST00000477200 FAM212AQ96EL1 285 aa13.84□□□□□ -0.19
PIKFYVE-209ENST00000477200 LCE2DQ5TA82 110 aaPredicted RBP13.83□□□□□ -0.2
PIKFYVE-209ENST00000477200 SEC24BO95487 1268 aa13.82□□□□□ -0.2
PIKFYVE-209ENST00000477200 IER5LQ5T953 404 aa13.79□□□□□ -0.2
PIKFYVE-209ENST00000477200 FAM163AQ96GL9 167 aaPredicted RBP13.79□□□□□ -0.2
PIKFYVE-209ENST00000477200 TMEM106CQ9BVX2 250 aa13.76□□□□□ -0.21
PIKFYVE-209ENST00000477200 DCAF8Q5TAQ9 597 aa13.75□□□□□ -0.21
PIKFYVE-209ENST00000477200 PYGBP11216 843 aa13.72□□□□□ -0.21
PIKFYVE-209ENST00000477200 FBXO3Q9UK99 471 aa13.72□□□□□ -0.21
PIKFYVE-209ENST00000477200 PCDH10Q9P2E7 1040 aa13.67□□□□□ -0.22
PIKFYVE-209ENST00000477200 IRX5P78411 483 aaPredicted RBP13.65□□□□□ -0.22
PIKFYVE-209ENST00000477200 PCDHB8Q9UN66 801 aa13.65□□□□□ -0.22
PIKFYVE-209ENST00000477200 PLCG2P16885 1265 aa13.63□□□□□ -0.23
PIKFYVE-209ENST00000477200 VASPP50552 380 aaPredicted RBP13.59□□□□□ -0.23
PIKFYVE-209ENST00000477200 SLAIN1Q8ND83 568 aa13.59□□□□□ -0.23
PIKFYVE-209ENST00000477200 KLHL34Q8N239 644 aa13.58□□□□□ -0.24
PIKFYVE-209ENST00000477200 OCEL1Q9H607 264 aa13.56□□□□□ -0.24
PIKFYVE-209ENST00000477200 GSE1Q14687 1217 aa13.53□□□□□ -0.24
PIKFYVE-209ENST00000477200 ST18O60284 1047 aa13.49□□□□□ -0.25
PIKFYVE-209ENST00000477200 ZNF467Q7Z7K2 595 aaPredicted RBP13.47□□□□□ -0.25
PIKFYVE-209ENST00000477200 CHRM1P11229 460 aaPredicted RBP13.46□□□□□ -0.25
PIKFYVE-209ENST00000477200 CDAN1Q8IWY9 1227 aa13.44□□□□□ -0.26
PIKFYVE-209ENST00000477200 PDCD7Q8N8D1 485 aaKnown RBP13.43□□□□□ -0.26
PIKFYVE-209ENST00000477200 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.41□□□□□ -0.26
PIKFYVE-209ENST00000477200 PSEN1P49768 467 aa13.39□□□□□ -0.27
PIKFYVE-209ENST00000477200 IFNLR1Q8IU57 520 aaPredicted RBP13.39□□□□□ -0.27
PIKFYVE-209ENST00000477200 MKRN3Q13064 507 aaKnown RBP13.37□□□□□ -0.27
PIKFYVE-209ENST00000477200 GOLGA2Q08379 1002 aa13.36□□□□□ -0.27
PIKFYVE-209ENST00000477200 SPOCK2Q92563 424 aa13.34□□□□□ -0.27
PIKFYVE-209ENST00000477200 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.33□□□□□ -0.281e-12■■□□□ 12.3
PIKFYVE-209ENST00000477200 SNPHO15079 494 aa13.31□□□□□ -0.28
PIKFYVE-209ENST00000477200 CIZ1Q9ULV3 898 aaPredicted RBP13.31□□□□□ -0.28
PIKFYVE-209ENST00000477200 PDAP1Q13442 181 aaKnown RBP13.3□□□□□ -0.28
PIKFYVE-209ENST00000477200 L3MBTL3Q96JM7 780 aaPredicted RBP13.3□□□□□ -0.28
PIKFYVE-209ENST00000477200 TMEM121BQ9BXQ6 578 aaPredicted RBP13.29□□□□□ -0.28
PIKFYVE-209ENST00000477200 ILDR1Q86SU0 546 aaPredicted RBP13.28□□□□□ -0.28
PIKFYVE-209ENST00000477200 C3orf67Q6ZVT6 689 aa13.27□□□□□ -0.29
PIKFYVE-209ENST00000477200 DPY19L2Q6NUT2 758 aa13.25□□□□□ -0.29
PIKFYVE-209ENST00000477200 MARVELD3Q96A59 401 aa13.25□□□□□ -0.29
PIKFYVE-209ENST00000477200 CABP2Q9NPB3 220 aa13.23□□□□□ -0.29
PIKFYVE-209ENST00000477200 EMP3P54852 163 aa13.12□□□□□ -0.31
PIKFYVE-209ENST00000477200 SPNS2Q8IVW8 549 aa13.12□□□□□ -0.31
PIKFYVE-209ENST00000477200 BOLA1Q9Y3E2 137 aa13.12□□□□□ -0.31
PIKFYVE-209ENST00000477200 POTEB3A0JP26 581 aa13.1□□□□□ -0.31
PIKFYVE-209ENST00000477200 MMRN1Q13201 1228 aa13.1□□□□□ -0.31
PIKFYVE-209ENST00000477200 POTEBQ6S5H4 581 aa13.1□□□□□ -0.31
PIKFYVE-209ENST00000477200 EFCAB3Q8N7B9 438 aa13.07□□□□□ -0.32
PIKFYVE-209ENST00000477200 G3V3G9 751 aa13.06□□□□□ -0.32
PIKFYVE-209ENST00000477200 HOXB3P14651 431 aaPredicted RBP13.05□□□□□ -0.32
PIKFYVE-209ENST00000477200 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
PIKFYVE-209ENST00000477200 HS3ST6Q96QI5 342 aa13.05□□□□□ -0.32
PIKFYVE-209ENST00000477200 FAM205CA6NFA0 338 aa13.04□□□□□ -0.32
PIKFYVE-209ENST00000477200 KRTAP3-3Q9BYR6 98 aa13.01□□□□□ -0.33
PIKFYVE-209ENST00000477200 KRTAP3-2Q9BYR7 98 aa13.01□□□□□ -0.33
PIKFYVE-209ENST00000477200 RNF25Q96BH1 459 aaPredicted RBP12.99□□□□□ -0.33
PIKFYVE-209ENST00000477200 RIOK3O14730 519 aaKnown RBP12.95□□□□□ -0.34
PIKFYVE-209ENST00000477200 HOXB1P14653 301 aaPredicted RBP12.94□□□□□ -0.34
PIKFYVE-209ENST00000477200 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.93□□□□□ -0.34
PIKFYVE-209ENST00000477200 TMEM92Q6UXU6 159 aa12.93□□□□□ -0.34
PIKFYVE-209ENST00000477200 ZFP91Q96JP5 570 aaPredicted RBP12.93□□□□□ -0.34
PIKFYVE-209ENST00000477200 MICALL2Q8IY33 904 aa12.92□□□□□ -0.34
PIKFYVE-209ENST00000477200 ZNF710Q8N1W2 664 aa12.92□□□□□ -0.34
PIKFYVE-209ENST00000477200 MS4A4AQ96JQ5 239 aa12.92□□□□□ -0.34
PIKFYVE-209ENST00000477200 DOK7Q18PE1 504 aa12.91□□□□□ -0.34
PIKFYVE-209ENST00000477200 SOX12O15370 315 aa12.9□□□□□ -0.34
PIKFYVE-209ENST00000477200 VGFO15240 615 aaPredicted RBP12.88□□□□□ -0.35
PIKFYVE-209ENST00000477200 PHF8Q9UPP1 1060 aa12.88□□□□□ -0.35
PIKFYVE-209ENST00000477200 ERBB3P21860 1342 aa12.85□□□□□ -0.35
PIKFYVE-209ENST00000477200 RIMBP2O15034 1052 aa12.81□□□□□ -0.36
PIKFYVE-209ENST00000477200 VARS2Q5ST30 1063 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms