RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 FAM212AQ96EL1 285 aa14.34□□□□□ -0.11
CDKN1B-204ENST00000477087 IFNLR1Q8IU57 520 aaPredicted RBP14.3□□□□□ -0.12
CDKN1B-204ENST00000477087 CCDC61Q9Y6R9 512 aa14.3□□□□□ -0.12
CDKN1B-204ENST00000477087 DCAF8Q5TAQ9 597 aa14.27□□□□□ -0.13
CDKN1B-204ENST00000477087 SPOCK2Q92563 424 aa14.25□□□□□ -0.13
CDKN1B-204ENST00000477087 GALR2O43603 387 aaPredicted RBP14.23□□□□□ -0.13
CDKN1B-204ENST00000477087 DCBLD2Q96PD2 775 aa14.2□□□□□ -0.14
CDKN1B-204ENST00000477087 GSE1Q14687 1217 aa14.19□□□□□ -0.14
CDKN1B-204ENST00000477087 KIF12Q96FN5 646 aa14.19□□□□□ -0.14
CDKN1B-204ENST00000477087 MS4A3Q96HJ5 214 aa14.18□□□□□ -0.14
CDKN1B-204ENST00000477087 MAP3K13O43283 966 aa14.14□□□□□ -0.15
CDKN1B-204ENST00000477087 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
CDKN1B-204ENST00000477087 PYGBP11216 843 aa14.1□□□□□ -0.15
CDKN1B-204ENST00000477087 PCDHB13Q9Y5F0 798 aa14.1□□□□□ -0.15
CDKN1B-204ENST00000477087 SGIP1Q9BQI5 828 aa14.09□□□□□ -0.15
CDKN1B-204ENST00000477087 POTEIP0CG38 1075 aa14.06□□□□□ -0.16
CDKN1B-204ENST00000477087 IFNL1Q8IU54 200 aa13.99□□□□□ -0.17
CDKN1B-204ENST00000477087 TIE1P35590 1138 aa13.97□□□□□ -0.17
CDKN1B-204ENST00000477087 TRPC6Q9Y210 931 aa13.97□□□□□ -0.17
CDKN1B-204ENST00000477087 ATMINO43313 823 aaPredicted RBP13.96□□□□□ -0.17
CDKN1B-204ENST00000477087 CHRM1P11229 460 aaPredicted RBP13.96□□□□□ -0.17
CDKN1B-204ENST00000477087 ASTLQ6HA08 431 aaPredicted RBP13.96□□□□□ -0.17
CDKN1B-204ENST00000477087 TRIM41Q8WV44 630 aa13.95□□□□□ -0.18
CDKN1B-204ENST00000477087 BMP2KQ9NSY1 1161 aaPredicted RBP13.94□□□□□ -0.18
CDKN1B-204ENST00000477087 ZNF467Q7Z7K2 595 aaPredicted RBP13.93□□□□□ -0.18
CDKN1B-204ENST00000477087 PCDHB8Q9UN66 801 aa13.92□□□□□ -0.18
CDKN1B-204ENST00000477087 ATN1P54259 1190 aaPredicted RBP13.9□□□□□ -0.18
CDKN1B-204ENST00000477087 TTLL13PA6NNM8 815 aa13.88□□□□□ -0.19
CDKN1B-204ENST00000477087 PELP1Q8IZL8 1130 aaKnown RBP13.87□□□□□ -0.19
CDKN1B-204ENST00000477087 TMEM106CQ9BVX2 250 aa13.87□□□□□ -0.19
CDKN1B-204ENST00000477087 SLC39A7Q92504 469 aa13.86□□□□□ -0.19
CDKN1B-204ENST00000477087 C7P10643 843 aa13.82□□□□□ -0.2
CDKN1B-204ENST00000477087 METRNQ9UJH8 293 aa13.82□□□□□ -0.2
CDKN1B-204ENST00000477087 LHX8Q68G74 356 aa13.81□□□□□ -0.2
CDKN1B-204ENST00000477087 TRIM35Q9UPQ4 493 aa13.81□□□□□ -0.2
CDKN1B-204ENST00000477087 PSEN1P49768 467 aa13.77□□□□□ -0.21
CDKN1B-204ENST00000477087 PDAP1Q13442 181 aaKnown RBP13.77□□□□□ -0.21
CDKN1B-204ENST00000477087 ECM2O94769 699 aaPredicted RBP13.74□□□□□ -0.21
CDKN1B-204ENST00000477087 GOLGA2Q08379 1002 aa13.73□□□□□ -0.21
CDKN1B-204ENST00000477087 IER5LQ5T953 404 aa13.72□□□□□ -0.21
CDKN1B-204ENST00000477087 RIOK3O14730 519 aaKnown RBP13.71□□□□□ -0.21
CDKN1B-204ENST00000477087 SEC24BO95487 1268 aa13.71□□□□□ -0.21
CDKN1B-204ENST00000477087 PKD2Q13563 968 aa13.68□□□□□ -0.22
CDKN1B-204ENST00000477087 RNF25Q96BH1 459 aaPredicted RBP13.66□□□□□ -0.22
CDKN1B-204ENST00000477087 TAOK2Q9UL54 1235 aa13.66□□□□□ -0.22
CDKN1B-204ENST00000477087 MKRN3Q13064 507 aaKnown RBP13.65□□□□□ -0.22
CDKN1B-204ENST00000477087 VGFO15240 615 aaPredicted RBP13.64□□□□□ -0.23
CDKN1B-204ENST00000477087 PLCG2P16885 1265 aa13.63□□□□□ -0.23
CDKN1B-204ENST00000477087 POTEB2H3BUK9 544 aa13.61□□□□□ -0.23
CDKN1B-204ENST00000477087 CABP2Q9NPB3 220 aa13.61□□□□□ -0.23
CDKN1B-204ENST00000477087 COLQQ9Y215 455 aaPredicted RBP13.61□□□□□ -0.23
CDKN1B-204ENST00000477087 POTEFA5A3E0 1075 aa13.6□□□□□ -0.23
CDKN1B-204ENST00000477087 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.58□□□□□ -0.24
CDKN1B-204ENST00000477087 IRX5P78411 483 aaPredicted RBP13.58□□□□□ -0.24
CDKN1B-204ENST00000477087 ZFP91Q96JP5 570 aaPredicted RBP13.58□□□□□ -0.24
CDKN1B-204ENST00000477087 OCEL1Q9H607 264 aa13.57□□□□□ -0.24
CDKN1B-204ENST00000477087 RGL2O15211 777 aa13.56□□□□□ -0.24
CDKN1B-204ENST00000477087 MAMSTRQ6ZN01 415 aa13.54□□□□□ -0.24
CDKN1B-204ENST00000477087 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.25
CDKN1B-204ENST00000477087 SCUBE2Q9NQ36 999 aa13.51□□□□□ -0.25
CDKN1B-204ENST00000477087 OTUD5Q96G74 571 aa13.49□□□□□ -0.25
CDKN1B-204ENST00000477087 POTEJP0CG39 1038 aa13.48□□□□□ -0.25
CDKN1B-204ENST00000477087 EFCAB3Q8N7B9 438 aa13.48□□□□□ -0.25
CDKN1B-204ENST00000477087 BCL11BQ9C0K0 894 aaPredicted RBP13.48□□□□□ -0.25
CDKN1B-204ENST00000477087 STK24Q9Y6E0 443 aa13.48□□□□□ -0.25
CDKN1B-204ENST00000477087 STK25O00506 426 aa13.47□□□□□ -0.25
CDKN1B-204ENST00000477087 PDCD7Q8N8D1 485 aaKnown RBP13.44□□□□□ -0.26
CDKN1B-204ENST00000477087 SOX12O15370 315 aa13.41□□□□□ -0.26
CDKN1B-204ENST00000477087 L3MBTL3Q96JM7 780 aaPredicted RBP13.41□□□□□ -0.26
CDKN1B-204ENST00000477087 G3V3G9 751 aa13.38□□□□□ -0.27
CDKN1B-204ENST00000477087 ILDR1Q86SU0 546 aaPredicted RBP13.38□□□□□ -0.27
CDKN1B-204ENST00000477087 DPY19L2Q6NUT2 758 aa13.34□□□□□ -0.27
CDKN1B-204ENST00000477087 PHF8Q9UPP1 1060 aa13.34□□□□□ -0.27
CDKN1B-204ENST00000477087 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.28
CDKN1B-204ENST00000477087 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.33□□□□□ -0.28
CDKN1B-204ENST00000477087 NLRP6P59044 892 aa13.32□□□□□ -0.28
CDKN1B-204ENST00000477087 DCAF8L2P0C7V8 631 aa13.31□□□□□ -0.28
CDKN1B-204ENST00000477087 AMER1Q5JTC6 1135 aaPredicted RBP13.31□□□□□ -0.28
CDKN1B-204ENST00000477087 CHGAP10645 457 aaKnown RBP13.3□□□□□ -0.28
CDKN1B-204ENST00000477087 HS6ST3Q8IZP7 471 aa13.3□□□□□ -0.28
CDKN1B-204ENST00000477087 SLAIN1Q8ND83 568 aa13.3□□□□□ -0.28
CDKN1B-204ENST00000477087 BOLA1Q9Y3E2 137 aa13.3□□□□□ -0.28
CDKN1B-204ENST00000477087 MS4A4AQ96JQ5 239 aa13.24□□□□□ -0.29
CDKN1B-204ENST00000477087 MFRPQ9BY79 579 aa13.24□□□□□ -0.29
CDKN1B-204ENST00000477087 FBXO22Q8NEZ5 403 aa13.22□□□□□ -0.29
CDKN1B-204ENST00000477087 MICALL2Q8IY33 904 aa13.18□□□□□ -0.3
CDKN1B-204ENST00000477087 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
CDKN1B-204ENST00000477087 RTN4Q9NQC3 1192 aaKnown RBP13.17□□□□□ -0.3
CDKN1B-204ENST00000477087 FAM163AQ96GL9 167 aaPredicted RBP13.13□□□□□ -0.31
CDKN1B-204ENST00000477087 DNAJC5Q9H3Z4 198 aa13.12□□□□□ -0.31
CDKN1B-204ENST00000477087 SNPHO15079 494 aa13.11□□□□□ -0.31
CDKN1B-204ENST00000477087 RYDENQ9NUL5 291 aaKnown RBP13.09□□□□□ -0.31
CDKN1B-204ENST00000477087 NKX1-1Q15270 411 aaPredicted RBP13.06□□□□□ -0.32
CDKN1B-204ENST00000477087 PPP1R37O75864 691 aa13.03□□□□□ -0.32
CDKN1B-204ENST00000477087 TMEM92Q6UXU6 159 aa13□□□□□ -0.33
CDKN1B-204ENST00000477087 POTEMA6NI47 508 aa12.97□□□□□ -0.33
CDKN1B-204ENST00000477087 ST18O60284 1047 aa12.97□□□□□ -0.33
CDKN1B-204ENST00000477087 LCE2DQ5TA82 110 aaPredicted RBP12.96□□□□□ -0.33
CDKN1B-204ENST00000477087 POTEGQ6S5H5 508 aa12.96□□□□□ -0.33
CDKN1B-204ENST00000477087 NISCHQ9Y2I1 1504 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms