RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 CIZ1Q9ULV3 898 aaPredicted RBP10.49□□□□□ -0.73
ITGA4-208ENST00000476824 CCDC61Q9Y6R9 512 aa10.48□□□□□ -0.73
ITGA4-208ENST00000476824 ZNF579Q8NAF0 562 aaKnown RBP10.45□□□□□ -0.74
ITGA4-208ENST00000476824 GSE1Q14687 1217 aa10.44□□□□□ -0.74
ITGA4-208ENST00000476824 PYGBP11216 843 aa10.43□□□□□ -0.74
ITGA4-208ENST00000476824 SP7Q8TDD2 431 aaPredicted RBP10.42□□□□□ -0.74
ITGA4-208ENST00000476824 PKD2Q13563 968 aa10.39□□□□□ -0.75
ITGA4-208ENST00000476824 KIF12Q96FN5 646 aa10.39□□□□□ -0.75
ITGA4-208ENST00000476824 GABBR2O75899 941 aa10.38□□□□□ -0.75
ITGA4-208ENST00000476824 MAP3K13O43283 966 aa10.37□□□□□ -0.75
ITGA4-208ENST00000476824 GALR2O43603 387 aaPredicted RBP10.35□□□□□ -0.75
ITGA4-208ENST00000476824 MS4A3Q96HJ5 214 aa10.35□□□□□ -0.75
ITGA4-208ENST00000476824 RTN4Q9NQC3 1192 aaKnown RBP10.33□□□□□ -0.76
ITGA4-208ENST00000476824 ECM2O94769 699 aaPredicted RBP10.32□□□□□ -0.76
ITGA4-208ENST00000476824 PCDHB13Q9Y5F0 798 aa10.32□□□□□ -0.76
ITGA4-208ENST00000476824 CHRM1P11229 460 aaPredicted RBP10.3□□□□□ -0.76
ITGA4-208ENST00000476824 IFNL1Q8IU54 200 aa10.3□□□□□ -0.76
ITGA4-208ENST00000476824 PCDHB8Q9UN66 801 aa10.3□□□□□ -0.76
ITGA4-208ENST00000476824 TRPC6Q9Y210 931 aa10.3□□□□□ -0.76
ITGA4-208ENST00000476824 RNF25Q96BH1 459 aaPredicted RBP10.28□□□□□ -0.76
ITGA4-208ENST00000476824 TRIM41Q8WV44 630 aa10.27□□□□□ -0.77
ITGA4-208ENST00000476824 RGL2O15211 777 aa10.26□□□□□ -0.77
ITGA4-208ENST00000476824 AMER1Q5JTC6 1135 aaPredicted RBP10.25□□□□□ -0.77
ITGA4-208ENST00000476824 SGIP1Q9BQI5 828 aa10.24□□□□□ -0.77
ITGA4-208ENST00000476824 CLCN6P51797 869 aa10.23□□□□□ -0.77
ITGA4-208ENST00000476824 ZNF467Q7Z7K2 595 aaPredicted RBP10.2□□□□□ -0.78
ITGA4-208ENST00000476824 RIOK3O14730 519 aaKnown RBP10.19□□□□□ -0.78
ITGA4-208ENST00000476824 POTEIP0CG38 1075 aa10.19□□□□□ -0.78
ITGA4-208ENST00000476824 BMP2KQ9NSY1 1161 aaPredicted RBP10.18□□□□□ -0.78
ITGA4-208ENST00000476824 DCBLD2Q96PD2 775 aa10.17□□□□□ -0.78
ITGA4-208ENST00000476824 PSEN1P49768 467 aa10.15□□□□□ -0.78
ITGA4-208ENST00000476824 TMEM106CQ9BVX2 250 aa10.15□□□□□ -0.78
ITGA4-208ENST00000476824 TTLL13PA6NNM8 815 aa10.14□□□□□ -0.79
ITGA4-208ENST00000476824 ATMINO43313 823 aaPredicted RBP10.13□□□□□ -0.79
ITGA4-208ENST00000476824 TIE1P35590 1138 aa10.13□□□□□ -0.79
ITGA4-208ENST00000476824 ATN1P54259 1190 aaPredicted RBP10.13□□□□□ -0.79
ITGA4-208ENST00000476824 PDAP1Q13442 181 aaKnown RBP10.13□□□□□ -0.79
ITGA4-208ENST00000476824 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.12□□□□□ -0.79
ITGA4-208ENST00000476824 PELP1Q8IZL8 1130 aaKnown RBP10.12□□□□□ -0.79
ITGA4-208ENST00000476824 ZFP91Q96JP5 570 aaPredicted RBP10.12□□□□□ -0.79
ITGA4-208ENST00000476824 VGFO15240 615 aaPredicted RBP10.11□□□□□ -0.79
ITGA4-208ENST00000476824 ASTLQ6HA08 431 aaPredicted RBP10.11□□□□□ -0.79
ITGA4-208ENST00000476824 DCAF8L2P0C7V8 631 aa10.1□□□□□ -0.79
ITGA4-208ENST00000476824 TRIM35Q9UPQ4 493 aa10.07□□□□□ -0.8
ITGA4-208ENST00000476824 BCL11BQ9C0K0 894 aaPredicted RBP10.05□□□□□ -0.8
ITGA4-208ENST00000476824 STK25O00506 426 aa10.04□□□□□ -0.8
ITGA4-208ENST00000476824 CABP2Q9NPB3 220 aa10.04□□□□□ -0.8
ITGA4-208ENST00000476824 STK24Q9Y6E0 443 aa10.03□□□□□ -0.8
ITGA4-208ENST00000476824 CHGAP10645 457 aaKnown RBP10.02□□□□□ -0.81
ITGA4-208ENST00000476824 TAOK2Q9UL54 1235 aa10.01□□□□□ -0.81
ITGA4-208ENST00000476824 EFCAB3Q8N7B9 438 aa9.99□□□□□ -0.81
ITGA4-208ENST00000476824 HS6ST3Q8IZP7 471 aa9.98□□□□□ -0.81
ITGA4-208ENST00000476824 METRNQ9UJH8 293 aa9.98□□□□□ -0.81
ITGA4-208ENST00000476824 GOLGA2Q08379 1002 aa9.97□□□□□ -0.81
ITGA4-208ENST00000476824 SLC39A7Q92504 469 aa9.96□□□□□ -0.82
ITGA4-208ENST00000476824 POTEFA5A3E0 1075 aa9.95□□□□□ -0.82
ITGA4-208ENST00000476824 MKRN3Q13064 507 aaKnown RBP9.95□□□□□ -0.82
ITGA4-208ENST00000476824 COLQQ9Y215 455 aaPredicted RBP9.95□□□□□ -0.82
ITGA4-208ENST00000476824 C7P10643 843 aa9.94□□□□□ -0.82
ITGA4-208ENST00000476824 IRX5P78411 483 aaPredicted RBP9.92□□□□□ -0.82
ITGA4-208ENST00000476824 NKX1-1Q15270 411 aaPredicted RBP9.91□□□□□ -0.82
ITGA4-208ENST00000476824 IER5LQ5T953 404 aa9.91□□□□□ -0.82
ITGA4-208ENST00000476824 SEC24BO95487 1268 aa9.9□□□□□ -0.82
ITGA4-208ENST00000476824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.9□□□□□ -0.82
ITGA4-208ENST00000476824 PHF8Q9UPP1 1060 aa9.9□□□□□ -0.82
ITGA4-208ENST00000476824 POTEB2H3BUK9 544 aa9.88□□□□□ -0.83
ITGA4-208ENST00000476824 PDCD7Q8N8D1 485 aaKnown RBP9.88□□□□□ -0.83
ITGA4-208ENST00000476824 MFRPQ9BY79 579 aa9.88□□□□□ -0.83
ITGA4-208ENST00000476824 PLCG2P16885 1265 aa9.87□□□□□ -0.83
ITGA4-208ENST00000476824 DPY19L2Q6NUT2 758 aa9.87□□□□□ -0.83
ITGA4-208ENST00000476824 OCEL1Q9H607 264 aa9.87□□□□□ -0.83
ITGA4-208ENST00000476824 SOX12O15370 315 aa9.86□□□□□ -0.83
ITGA4-208ENST00000476824 MS4A4AQ96JQ5 239 aa9.86□□□□□ -0.83
ITGA4-208ENST00000476824 ILDR1Q86SU0 546 aaPredicted RBP9.85□□□□□ -0.83
ITGA4-208ENST00000476824 POTEJP0CG39 1038 aa9.84□□□□□ -0.83
ITGA4-208ENST00000476824 FBXO22Q8NEZ5 403 aa9.84□□□□□ -0.83
ITGA4-208ENST00000476824 DNAJC5Q9H3Z4 198 aa9.84□□□□□ -0.83
ITGA4-208ENST00000476824 NLRP6P59044 892 aa9.81□□□□□ -0.84
ITGA4-208ENST00000476824 BBXQ8WY36 941 aaPredicted RBP9.8□□□□□ -0.84
ITGA4-208ENST00000476824 LHX8Q68G74 356 aa9.79□□□□□ -0.84
ITGA4-208ENST00000476824 PPP1R37O75864 691 aa9.78□□□□□ -0.84
ITGA4-208ENST00000476824 GTPBP6O43824 516 aaPredicted RBP9.77□□□□□ -0.85
ITGA4-208ENST00000476824 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.72□□□□□ -0.85
ITGA4-208ENST00000476824 BOLA1Q9Y3E2 137 aa9.72□□□□□ -0.85
ITGA4-208ENST00000476824 PAXIP1Q6ZW49 1069 aaPredicted RBP9.71□□□□□ -0.86
ITGA4-208ENST00000476824 L3MBTL3Q96JM7 780 aaPredicted RBP9.71□□□□□ -0.86
ITGA4-208ENST00000476824 MICALL2Q8IY33 904 aa9.7□□□□□ -0.86
ITGA4-208ENST00000476824 OTUD5Q96G74 571 aa9.7□□□□□ -0.86
ITGA4-208ENST00000476824 CFAP44Q96MT7 982 aa9.7□□□□□ -0.86
ITGA4-208ENST00000476824 SPRYD3Q8NCJ5 442 aa9.68□□□□□ -0.86
ITGA4-208ENST00000476824 TMEM121BQ9BXQ6 578 aaPredicted RBP9.68□□□□□ -0.86
ITGA4-208ENST00000476824 G3V3G9 751 aa9.66□□□□□ -0.86
ITGA4-208ENST00000476824 RYDENQ9NUL5 291 aaKnown RBP9.66□□□□□ -0.86
ITGA4-208ENST00000476824 SCUBE2Q9NQ36 999 aa9.65□□□□□ -0.86
ITGA4-208ENST00000476824 C3orf67Q6ZVT6 689 aa9.64□□□□□ -0.87
ITGA4-208ENST00000476824 TMEM92Q6UXU6 159 aa9.63□□□□□ -0.87
ITGA4-208ENST00000476824 MAMSTRQ6ZN01 415 aa9.63□□□□□ -0.87
ITGA4-208ENST00000476824 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.62□□□□□ -0.87
ITGA4-208ENST00000476824 SLAIN1Q8ND83 568 aa9.6□□□□□ -0.87
ITGA4-208ENST00000476824 CADPS2Q86UW7 1296 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms