RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 OTUD5Q96G74 571 aa16.46■□□□□ 0.23
CHD6-207ENST00000476641 ASTLQ6HA08 431 aaPredicted RBP16.44■□□□□ 0.22
CHD6-207ENST00000476641 PLEKHG5O94827 1062 aa16.43■□□□□ 0.22
CHD6-207ENST00000476641 DCAF8L2P0C7V8 631 aa16.43■□□□□ 0.22
CHD6-207ENST00000476641 MIER1Q8N108 512 aa16.43■□□□□ 0.22
CHD6-207ENST00000476641 CCDC61Q9Y6R9 512 aa16.43■□□□□ 0.22
CHD6-207ENST00000476641 ATMINO43313 823 aaPredicted RBP16.41■□□□□ 0.22
CHD6-207ENST00000476641 METRNQ9UJH8 293 aa16.39■□□□□ 0.21
CHD6-207ENST00000476641 RB1CC1Q8TDY2 1594 aa16.37■□□□□ 0.21
CHD6-207ENST00000476641 SLC39A7Q92504 469 aa16.36■□□□□ 0.21
CHD6-207ENST00000476641 KIF12Q96FN5 646 aa16.35■□□□□ 0.21
CHD6-207ENST00000476641 C7P10643 843 aa16.34■□□□□ 0.21
CHD6-207ENST00000476641 RASEFQ8IZ41 740 aa16.32■□□□□ 0.2
CHD6-207ENST00000476641 NACADO15069 1562 aa16.3■□□□□ 0.2
CHD6-207ENST00000476641 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
CHD6-207ENST00000476641 ATN1P54259 1190 aaPredicted RBP16.28■□□□□ 0.2
CHD6-207ENST00000476641 MAP3K13O43283 966 aa16.26■□□□□ 0.19
CHD6-207ENST00000476641 BMP2KQ9NSY1 1161 aaPredicted RBP16.23■□□□□ 0.19
CHD6-207ENST00000476641 TRPC6Q9Y210 931 aa16.23■□□□□ 0.19
CHD6-207ENST00000476641 POTEJP0CG39 1038 aa16.22■□□□□ 0.19
CHD6-207ENST00000476641 PLSCR2Q9NRY7 297 aa16.18■□□□□ 0.18
CHD6-207ENST00000476641 ZCCHC6Q5VYS8 1495 aaKnown RBP16.17■□□□□ 0.18
CHD6-207ENST00000476641 TIE1P35590 1138 aa16.16■□□□□ 0.18
CHD6-207ENST00000476641 MAMSTRQ6ZN01 415 aa16.16■□□□□ 0.18
CHD6-207ENST00000476641 FKBP8Q14318 412 aa16.15■□□□□ 0.18
CHD6-207ENST00000476641 ZBTB47Q9UFB7 747 aaPredicted RBP16.15■□□□□ 0.18
CHD6-207ENST00000476641 MYO15BQ96JP2 1530 aa16.11■□□□□ 0.17
CHD6-207ENST00000476641 POTEMA6NI47 508 aa16.11■□□□□ 0.17
CHD6-207ENST00000476641 NUBP1P53384 320 aa16.11■□□□□ 0.17
CHD6-207ENST00000476641 POTEFA5A3E0 1075 aa16.09■□□□□ 0.17
CHD6-207ENST00000476641 TTLL13PA6NNM8 815 aa16.08■□□□□ 0.16
CHD6-207ENST00000476641 SCUBE2Q9NQ36 999 aa16.08■□□□□ 0.16
CHD6-207ENST00000476641 PCDHB13Q9Y5F0 798 aa16.08■□□□□ 0.16
CHD6-207ENST00000476641 POTEGQ6S5H5 508 aa16.06■□□□□ 0.16
CHD6-207ENST00000476641 SGIP1Q9BQI5 828 aa16.05■□□□□ 0.16
CHD6-207ENST00000476641 FAM212AQ96EL1 285 aa16.02■□□□□ 0.16
CHD6-207ENST00000476641 SEC24BO95487 1268 aa16.01■□□□□ 0.15
CHD6-207ENST00000476641 COLQQ9Y215 455 aaPredicted RBP16■□□□□ 0.15
CHD6-207ENST00000476641 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
CHD6-207ENST00000476641 DCAF1Q9Y4B6 1507 aa15.99■□□□□ 0.15
CHD6-207ENST00000476641 TRIM35Q9UPQ4 493 aa15.99■□□□□ 0.15
CHD6-207ENST00000476641 IFNL1Q8IU54 200 aa15.97■□□□□ 0.15
CHD6-207ENST00000476641 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
CHD6-207ENST00000476641 IER5LQ5T953 404 aa15.93■□□□□ 0.14
CHD6-207ENST00000476641 FAM163AQ96GL9 167 aaPredicted RBP15.92■□□□□ 0.14
CHD6-207ENST00000476641 LCE2DQ5TA82 110 aaPredicted RBP15.89■□□□□ 0.13
CHD6-207ENST00000476641 TMEM106CQ9BVX2 250 aa15.89■□□□□ 0.13
CHD6-207ENST00000476641 SCRIBQ14160 1630 aa15.88■□□□□ 0.13
CHD6-207ENST00000476641 DCAF8Q5TAQ9 597 aa15.86■□□□□ 0.13
CHD6-207ENST00000476641 FBXO3Q9UK99 471 aa15.86■□□□□ 0.13
CHD6-207ENST00000476641 PCDH10Q9P2E7 1040 aa15.82■□□□□ 0.12
CHD6-207ENST00000476641 PYGBP11216 843 aa15.81■□□□□ 0.12
CHD6-207ENST00000476641 PLCG2P16885 1265 aa15.77■□□□□ 0.12
CHD6-207ENST00000476641 PCDHB8Q9UN66 801 aa15.73■□□□□ 0.11
CHD6-207ENST00000476641 IRX5P78411 483 aaPredicted RBP15.72■□□□□ 0.11
CHD6-207ENST00000476641 KLHL34Q8N239 644 aa15.71■□□□□ 0.11
CHD6-207ENST00000476641 SLAIN1Q8ND83 568 aa15.71■□□□□ 0.11
CHD6-207ENST00000476641 VASPP50552 380 aaPredicted RBP15.69■□□□□ 0.1
CHD6-207ENST00000476641 OCEL1Q9H607 264 aa15.66■□□□□ 0.1
CHD6-207ENST00000476641 SHROOM4Q9ULL8 1493 aa15.63■□□□□ 0.09
CHD6-207ENST00000476641 GSE1Q14687 1217 aa15.62■□□□□ 0.09
CHD6-207ENST00000476641 ZNF467Q7Z7K2 595 aaPredicted RBP15.57■□□□□ 0.08
CHD6-207ENST00000476641 ST18O60284 1047 aa15.56■□□□□ 0.08
CHD6-207ENST00000476641 EIF4G1Q04637 1599 aaKnown RBP15.53■□□□□ 0.08
CHD6-207ENST00000476641 CDAN1Q8IWY9 1227 aa15.52■□□□□ 0.08
CHD6-207ENST00000476641 CC2D2AQ9P2K1 1620 aa15.52■□□□□ 0.08
CHD6-207ENST00000476641 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.51■□□□□ 0.07
CHD6-207ENST00000476641 CHRM1P11229 460 aaPredicted RBP15.5■□□□□ 0.07
CHD6-207ENST00000476641 GOLGA2Q08379 1002 aa15.5■□□□□ 0.07
CHD6-207ENST00000476641 CECR2Q9BXF3 1484 aa15.47■□□□□ 0.07
CHD6-207ENST00000476641 MKRN3Q13064 507 aaKnown RBP15.47■□□□□ 0.07
CHD6-207ENST00000476641 PDCD7Q8N8D1 485 aaKnown RBP15.46■□□□□ 0.07
CHD6-207ENST00000476641 PSEN1P49768 467 aa15.45■□□□□ 0.06
CHD6-207ENST00000476641 SNPHO15079 494 aa15.42■□□□□ 0.06
CHD6-207ENST00000476641 C3orf67Q6ZVT6 689 aa15.4■□□□□ 0.06
CHD6-207ENST00000476641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.4■□□□□ 0.069e-7■□□□□ 9.8
CHD6-207ENST00000476641 SPOCK2Q92563 424 aa15.39■□□□□ 0.05
CHD6-207ENST00000476641 IFNLR1Q8IU57 520 aaPredicted RBP15.38■□□□□ 0.05
CHD6-207ENST00000476641 L3MBTL3Q96JM7 780 aaPredicted RBP15.38■□□□□ 0.05
CHD6-207ENST00000476641 TMEM121BQ9BXQ6 578 aaPredicted RBP15.38■□□□□ 0.05
CHD6-207ENST00000476641 CIZ1Q9ULV3 898 aaPredicted RBP15.37■□□□□ 0.05
CHD6-207ENST00000476641 PDAP1Q13442 181 aaKnown RBP15.35■□□□□ 0.05
CHD6-207ENST00000476641 MARVELD3Q96A59 401 aa15.31■□□□□ 0.04
CHD6-207ENST00000476641 CABP2Q9NPB3 220 aa15.28■□□□□ 0.04
CHD6-207ENST00000476641 ILDR1Q86SU0 546 aaPredicted RBP15.26■□□□□ 0.03
CHD6-207ENST00000476641 DPY19L2Q6NUT2 758 aa15.24■□□□□ 0.03
CHD6-207ENST00000476641 G3V3G9 751 aa15.18■□□□□ 0.02
CHD6-207ENST00000476641 EMP3P54852 163 aa15.18■□□□□ 0.02
CHD6-207ENST00000476641 SPNS2Q8IVW8 549 aa15.15■□□□□ 0.02
CHD6-207ENST00000476641 BOLA1Q9Y3E2 137 aa15.15■□□□□ 0.02
CHD6-207ENST00000476641 MMRN1Q13201 1228 aa15.12■□□□□ 0.01
CHD6-207ENST00000476641 ATAD2BQ9ULI0 1458 aa15.12■□□□□ 0.01
CHD6-207ENST00000476641 SMARCA4P51532 1647 aa15.11■□□□□ 0.01
CHD6-207ENST00000476641 TRIM41Q8WV44 630 aa15.1■□□□□ 0.01
CHD6-207ENST00000476641 NCAPD3P42695 1498 aa15.09■□□□□ 0.01
CHD6-207ENST00000476641 FAM205CA6NFA0 338 aa15.07■□□□□ 0
CHD6-207ENST00000476641 EFCAB3Q8N7B9 438 aa15.06■□□□□ 0
CHD6-207ENST00000476641 HS3ST6Q96QI5 342 aa15.06■□□□□ 0
CHD6-207ENST00000476641 POTEB3A0JP26 581 aa15.05■□□□□ -0
CHD6-207ENST00000476641 POTEBQ6S5H4 581 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms