RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 CHRM1P11229 460 aaPredicted RBP5.35□□□□□ -1.55
LSM2-211ENST00000475835 UBTFP17480 764 aaKnown RBP5.35□□□□□ -1.55
LSM2-211ENST00000475835 NCLP19338 710 aaKnown RBP5.35□□□□□ -1.55
LSM2-211ENST00000475835 PAXIP1Q6ZW49 1069 aaPredicted RBP5.35□□□□□ -1.55
LSM2-211ENST00000475835 IPO4Q8TEX9 1081 aaKnown RBP5.35□□□□□ -1.55
LSM2-211ENST00000475835 ARID4BQ4LE39 1312 aaPredicted RBP5.34□□□□□ -1.55
LSM2-211ENST00000475835 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.34□□□□□ -1.55
LSM2-211ENST00000475835 NPM1P06748 294 aaKnown RBP eCLIP5.32□□□□□ -1.56
LSM2-211ENST00000475835 NAP1L2Q9ULW6 460 aaPredicted RBP5.32□□□□□ -1.56
LSM2-211ENST00000475835 IGSF3O75054 1194 aa5.3□□□□□ -1.56
LSM2-211ENST00000475835 PCGF6Q9BYE7 350 aa5.3□□□□□ -1.56
LSM2-211ENST00000475835 FANCIQ9NVI1 1328 aa5.29□□□□□ -1.56
LSM2-211ENST00000475835 VGFO15240 615 aaPredicted RBP5.29□□□□□ -1.56
LSM2-211ENST00000475835 NEFMP07197 916 aa5.29□□□□□ -1.56
LSM2-211ENST00000475835 SETQ01105 290 aaPredicted RBP5.29□□□□□ -1.56
LSM2-211ENST00000475835 PSMD1Q99460 953 aa5.28□□□□□ -1.56
LSM2-211ENST00000475835 ABCC9O60706 1549 aa5.28□□□□□ -1.56
LSM2-211ENST00000475835 C11orf95C9JLR9 678 aaPredicted RBP5.27□□□□□ -1.57
LSM2-211ENST00000475835 PTMAP06454 111 aaKnown RBP5.27□□□□□ -1.57
LSM2-211ENST00000475835 MCCP23508 829 aa5.27□□□□□ -1.57
LSM2-211ENST00000475835 GRIPAP1Q4V328 841 aa5.27□□□□□ -1.57
LSM2-211ENST00000475835 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.27□□□□□ -1.57
LSM2-211ENST00000475835 FTSJ3Q8IY81 847 aaKnown RBP5.27□□□□□ -1.57
LSM2-211ENST00000475835 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.27□□□□□ -1.57
LSM2-211ENST00000475835 RRP9O43818 475 aaKnown RBP5.26□□□□□ -1.57
LSM2-211ENST00000475835 CNGB1Q14028 1251 aaPredicted RBP5.26□□□□□ -1.57
LSM2-211ENST00000475835 RTL5Q5HYW3 569 aaPredicted RBP5.26□□□□□ -1.57
LSM2-211ENST00000475835 CCER1Q8TC90 406 aaPredicted RBP5.26□□□□□ -1.57
LSM2-211ENST00000475835 ZFP91Q96JP5 570 aaPredicted RBP5.26□□□□□ -1.57
LSM2-211ENST00000475835 RNF216Q9NWF9 866 aaPredicted RBP5.26□□□□□ -1.57
LSM2-211ENST00000475835 PTMSP20962 102 aa5.25□□□□□ -1.57
LSM2-211ENST00000475835 CC2D2BQ6DHV5 1058 aa5.25□□□□□ -1.57
LSM2-211ENST00000475835 PLCD4Q9BRC7 762 aa5.25□□□□□ -1.57
LSM2-211ENST00000475835 CANXP27824 592 aaKnown RBP5.24□□□□□ -1.57
LSM2-211ENST00000475835 CNPY4Q8N129 248 aa5.24□□□□□ -1.57
LSM2-211ENST00000475835 SLC4A1APQ9BWU0 796 aaKnown RBP5.24□□□□□ -1.57
LSM2-211ENST00000475835 CENPJQ9HC77 1338 aaPredicted RBP5.23□□□□□ -1.57
LSM2-211ENST00000475835 ZBTB7CA1YPR0 619 aa5.23□□□□□ -1.57
LSM2-211ENST00000475835 ANP32BQ92688 251 aaKnown RBP5.23□□□□□ -1.57
LSM2-211ENST00000475835 CALD1Q05682 793 aaKnown RBP5.22□□□□□ -1.57
LSM2-211ENST00000475835 ZNF592Q92610 1267 aa5.22□□□□□ -1.57
LSM2-211ENST00000475835 PPP6R1Q9UPN7 881 aa5.22□□□□□ -1.57
LSM2-211ENST00000475835 KDM2AQ9Y2K7 1162 aa5.21□□□□□ -1.58
LSM2-211ENST00000475835 SUPT16HQ9Y5B9 1047 aaKnown RBP5.21□□□□□ -1.58
LSM2-211ENST00000475835 BBXQ8WY36 941 aaPredicted RBP5.2□□□□□ -1.58
LSM2-211ENST00000475835 BRPF3Q9ULD4 1205 aa5.2□□□□□ -1.58
LSM2-211ENST00000475835 CLGNO14967 610 aa5.19□□□□□ -1.58
LSM2-211ENST00000475835 PPM1GO15355 546 aaPredicted RBP5.19□□□□□ -1.58
LSM2-211ENST00000475835 GTF2E1P29083 439 aaPredicted RBP5.19□□□□□ -1.58
LSM2-211ENST00000475835 AXDND1Q5T1B0 1012 aaPredicted RBP5.19□□□□□ -1.58
LSM2-211ENST00000475835 SECISBP2LQ93073 1101 aaKnown RBP5.19□□□□□ -1.58
LSM2-211ENST00000475835 CHMP4BQ9H444 224 aaKnown RBP5.19□□□□□ -1.58
LSM2-211ENST00000475835 SCRIBQ14160 1630 aa5.19□□□□□ -1.58
LSM2-211ENST00000475835 MAFGO15525 162 aa5.18□□□□□ -1.58
LSM2-211ENST00000475835 PHF14O94880 888 aa5.18□□□□□ -1.58
LSM2-211ENST00000475835 CERS3Q8IU89 383 aa5.18□□□□□ -1.58
LSM2-211ENST00000475835 ZNF622Q969S3 477 aaKnown RBP eCLIP5.18□□□□□ -1.58
LSM2-211ENST00000475835 RB1CC1Q8TDY2 1594 aa5.17□□□□□ -1.58
LSM2-211ENST00000475835 ANP32AP39687 249 aaKnown RBP5.17□□□□□ -1.58
LSM2-211ENST00000475835 WWC1Q8IX03 1113 aa5.17□□□□□ -1.58
LSM2-211ENST00000475835 IRX6P78412 446 aaPredicted RBP5.16□□□□□ -1.58
LSM2-211ENST00000475835 DIEXFQ68CQ4 756 aaKnown RBP5.16□□□□□ -1.58
LSM2-211ENST00000475835 STAC3Q96MF2 364 aa5.16□□□□□ -1.58
LSM2-211ENST00000475835 DNAJC2Q99543 621 aaKnown RBP5.16□□□□□ -1.58
LSM2-211ENST00000475835 RBM19Q9Y4C8 960 aaKnown RBP5.16□□□□□ -1.58
LSM2-211ENST00000475835 FAM193AP78312 1265 aa5.15□□□□□ -1.59
LSM2-211ENST00000475835 HSP90AA2PQ14568 343 aaPredicted RBP5.15□□□□□ -1.59
LSM2-211ENST00000475835 CFAP44Q96MT7 982 aa5.15□□□□□ -1.59
LSM2-211ENST00000475835 MMP14P50281 582 aa5.14□□□□□ -1.59
LSM2-211ENST00000475835 TMED8Q6PL24 325 aaPredicted RBP5.14□□□□□ -1.59
LSM2-211ENST00000475835 FAM43AQ8N2R8 423 aa5.14□□□□□ -1.59
LSM2-211ENST00000475835 CEP120Q8N960 986 aa5.14□□□□□ -1.59
LSM2-211ENST00000475835 IL27Q8NEV9 243 aa5.14□□□□□ -1.59
LSM2-211ENST00000475835 TRIM44Q96DX7 344 aaPredicted RBP5.14□□□□□ -1.59
LSM2-211ENST00000475835 CFAP65Q6ZU64 1925 aaKnown RBP5.13□□□□□ -1.59
LSM2-211ENST00000475835 ANAPC15P60006 121 aa5.13□□□□□ -1.59
LSM2-211ENST00000475835 GPATCH11Q8N954 259 aa5.13□□□□□ -1.59
LSM2-211ENST00000475835 PRDM10Q9NQV6 1147 aa5.13□□□□□ -1.59
LSM2-211ENST00000475835 PRDM4Q9UKN5 801 aa5.13□□□□□ -1.59
LSM2-211ENST00000475835 WASHC2CQ9Y4E1 1318 aa5.13□□□□□ -1.59
LSM2-211ENST00000475835 MSH5O43196 834 aa5.12□□□□□ -1.59
LSM2-211ENST00000475835 PRDM16Q9HAZ2 1276 aa5.12□□□□□ -1.59
LSM2-211ENST00000475835 RGS22Q8NE09 1264 aa5.11□□□□□ -1.59
LSM2-211ENST00000475835 USP35Q9P2H5 1018 aa5.11□□□□□ -1.59
LSM2-211ENST00000475835 UNC13AQ9UPW8 1703 aa5.11□□□□□ -1.59
LSM2-211ENST00000475835 RSF1Q96T23 1441 aaPredicted RBP5.1□□□□□ -1.59
LSM2-211ENST00000475835 IRX3P78415 501 aaPredicted RBP5.09□□□□□ -1.59
LSM2-211ENST00000475835 FBLN2P98095 1184 aa5.09□□□□□ -1.59
LSM2-211ENST00000475835 NBPF20Q3BBV1 942 aa5.09□□□□□ -1.59
LSM2-211ENST00000475835 HSP90AB4PQ58FF6 505 aa5.09□□□□□ -1.59
LSM2-211ENST00000475835 TRIM41Q8WV44 630 aa5.09□□□□□ -1.59
LSM2-211ENST00000475835 NOP58Q9Y2X3 529 aaKnown RBP5.09□□□□□ -1.59
LSM2-211ENST00000475835 WASHC2AQ641Q2 1341 aa5.08□□□□□ -1.6
LSM2-211ENST00000475835 HSP90AA1P07900 732 aaKnown RBP5.08□□□□□ -1.6
LSM2-211ENST00000475835 TAF3Q5VWG9 929 aa5.08□□□□□ -1.6
LSM2-211ENST00000475835 ZNF692Q9BU19 519 aaPredicted RBP5.08□□□□□ -1.6
LSM2-211ENST00000475835 CWC22Q9HCG8 908 aaKnown RBP5.08□□□□□ -1.6
LSM2-211ENST00000475835 KCNG1Q9UIX4 513 aa5.08□□□□□ -1.6
LSM2-211ENST00000475835 LAS1LQ9Y4W2 734 aaKnown RBP5.08□□□□□ -1.6
LSM2-211ENST00000475835 NBR1Q14596 966 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms