RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 CHIC2Q9UKJ5 165 aa18.81■□□□□ 0.6
SSPO-205ENST00000475488 CASC1Q6TDU7 716 aa18.8■□□□□ 0.6
SSPO-205ENST00000475488 TRIM44Q96DX7 344 aaPredicted RBP18.79■□□□□ 0.6
SSPO-205ENST00000475488 CLSTN1O94985 981 aa18.78■□□□□ 0.6
SSPO-205ENST00000475488 TSPY4P0CV99 314 aa18.78■□□□□ 0.6
SSPO-205ENST00000475488 TSPY10P0CW01 314 aa18.78■□□□□ 0.6
SSPO-205ENST00000475488 LMOD2Q6P5Q4 547 aa18.75■□□□□ 0.59
SSPO-205ENST00000475488 DDX10Q13206 875 aaKnown RBP18.75■□□□□ 0.59
SSPO-205ENST00000475488 GOLGA2Q08379 1002 aa18.75■□□□□ 0.59
SSPO-205ENST00000475488 GOLGA6L22H0YM25 854 aa18.75■□□□□ 0.59
SSPO-205ENST00000475488 BECN1Q14457 450 aa18.75■□□□□ 0.59
SSPO-205ENST00000475488 PPM1GO15355 546 aaPredicted RBP18.73■□□□□ 0.59
SSPO-205ENST00000475488 PTMAP06454 111 aaKnown RBP18.73■□□□□ 0.59
SSPO-205ENST00000475488 DNTTIP2Q5QJE6 756 aaKnown RBP18.69■□□□□ 0.58
SSPO-205ENST00000475488 CHMP7Q8WUX9 453 aaPredicted RBP18.69■□□□□ 0.58
SSPO-205ENST00000475488 LAS1LQ9Y4W2 734 aaKnown RBP18.67■□□□□ 0.58
SSPO-205ENST00000475488 TNNT2P45379 298 aaPredicted RBP18.67■□□□□ 0.58
SSPO-205ENST00000475488 KCNH8Q96L42 1107 aa18.66■□□□□ 0.58
SSPO-205ENST00000475488 MRS2Q9HD23 443 aa18.65■□□□□ 0.58
SSPO-205ENST00000475488 CSRNP3Q8WYN3 585 aa18.65■□□□□ 0.58
SSPO-205ENST00000475488 NAP1L2Q9ULW6 460 aaPredicted RBP18.64■□□□□ 0.58
SSPO-205ENST00000475488 DDRGK1Q96HY6 314 aa18.63■□□□□ 0.57
SSPO-205ENST00000475488 CFAP53Q96M91 514 aa18.63■□□□□ 0.57
SSPO-205ENST00000475488 FTSJ3Q8IY81 847 aaKnown RBP18.63■□□□□ 0.57
SSPO-205ENST00000475488 ACIN1Q9UKV3 1341 aaKnown RBP18.63■□□□□ 0.57
SSPO-205ENST00000475488 OS9Q13438 667 aaPredicted RBP18.62■□□□□ 0.57
SSPO-205ENST00000475488 FGD1P98174 961 aa18.61■□□□□ 0.57
SSPO-205ENST00000475488 ISY1Q9ULR0 285 aaKnown RBP18.61■□□□□ 0.57
SSPO-205ENST00000475488 GOLGA6L6A8MZA4 724 aa18.61■□□□□ 0.57
SSPO-205ENST00000475488 ANP32EQ9BTT0 268 aa18.6■□□□□ 0.57
SSPO-205ENST00000475488 SCRIBQ14160 1630 aa18.57■□□□□ 0.56
SSPO-205ENST00000475488 IRX6P78412 446 aaPredicted RBP18.56■□□□□ 0.56
SSPO-205ENST00000475488 PRM3Q9NNZ6 103 aa18.55■□□□□ 0.56
SSPO-205ENST00000475488 MTUS2Q5JR59 1369 aa18.55■□□□□ 0.56
SSPO-205ENST00000475488 PLCB2Q00722 1185 aa18.55■□□□□ 0.56
SSPO-205ENST00000475488 KCNJ4P48050 445 aa18.54■□□□□ 0.56
SSPO-205ENST00000475488 MAPK8IP3Q9UPT6 1336 aa18.51■□□□□ 0.55
SSPO-205ENST00000475488 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
SSPO-205ENST00000475488 TRHP20396 242 aaPredicted RBP18.5■□□□□ 0.55
SSPO-205ENST00000475488 POGKQ9P215 609 aa18.49■□□□□ 0.55
SSPO-205ENST00000475488 EIF4G2P78344 907 aaKnown RBP eCLIP18.49■□□□□ 0.55
SSPO-205ENST00000475488 KNSTRNQ9Y448 316 aa18.47■□□□□ 0.55
SSPO-205ENST00000475488 CDCA8Q53HL2 280 aa18.45■□□□□ 0.54
SSPO-205ENST00000475488 NRDCO43847 1150 aa18.45■□□□□ 0.54
SSPO-205ENST00000475488 TMX4Q9H1E5 349 aaPredicted RBP18.44■□□□□ 0.54
SSPO-205ENST00000475488 RRP7BPQ9NSQ0 103 aa18.43■□□□□ 0.54
SSPO-205ENST00000475488 NEUROD2Q15784 382 aa18.42■□□□□ 0.54
SSPO-205ENST00000475488 HIRIP3Q9BW71 556 aaPredicted RBP18.42■□□□□ 0.54
SSPO-205ENST00000475488 HSP90AB1P08238 724 aaKnown RBP18.42■□□□□ 0.54
SSPO-205ENST00000475488 NUDCQ9Y266 331 aa18.42■□□□□ 0.54
SSPO-205ENST00000475488 KIAA2012Q0VF49 1180 aa18.39■□□□□ 0.54
SSPO-205ENST00000475488 GNL2Q13823 731 aaKnown RBP18.38■□□□□ 0.53
SSPO-205ENST00000475488 PLEKHD1A6NEE1 506 aa18.38■□□□□ 0.53
SSPO-205ENST00000475488 GOLGA6L4A6NEF3 574 aa18.38■□□□□ 0.53
SSPO-205ENST00000475488 PNNQ9H307 717 aaKnown RBP18.38■□□□□ 0.53
SSPO-205ENST00000475488 L1TD1Q5T7N2 865 aaKnown RBP18.37■□□□□ 0.53
SSPO-205ENST00000475488 CHMP4BQ9H444 224 aaKnown RBP18.35■□□□□ 0.53
SSPO-205ENST00000475488 SENP3-EIF4A1A0A087X0R7 540 aa18.34■□□□□ 0.53
SSPO-205ENST00000475488 SOX12O15370 315 aa18.34■□□□□ 0.53
SSPO-205ENST00000475488 U2SURPO15042 1029 aaKnown RBP18.33■□□□□ 0.53
SSPO-205ENST00000475488 NOC3LQ8WTT2 800 aaKnown RBP18.33■□□□□ 0.53
SSPO-205ENST00000475488 DRC7Q8IY82 874 aa18.33■□□□□ 0.52
SSPO-205ENST00000475488 FRAT1Q92837 279 aaPredicted RBP18.32■□□□□ 0.52
SSPO-205ENST00000475488 NAP1L5Q96NT1 182 aaPredicted RBP18.32■□□□□ 0.52
SSPO-205ENST00000475488 CHAF1AQ13111 956 aaPredicted RBP18.29■□□□□ 0.52
SSPO-205ENST00000475488 KRI1Q8N9T8 703 aaKnown RBP18.29■□□□□ 0.52
SSPO-205ENST00000475488 G3V3G9 751 aa18.29■□□□□ 0.52
SSPO-205ENST00000475488 DCAF8Q5TAQ9 597 aa18.29■□□□□ 0.52
SSPO-205ENST00000475488 MCCP23508 829 aa18.28■□□□□ 0.52
SSPO-205ENST00000475488 RSF1Q96T23 1441 aaPredicted RBP18.28■□□□□ 0.52
SSPO-205ENST00000475488 HDGFP51858 240 aaKnown RBP18.27■□□□□ 0.52
SSPO-205ENST00000475488 MLECQ14165 292 aa18.27■□□□□ 0.51
SSPO-205ENST00000475488 CCDC9Q9Y3X0 531 aaKnown RBP18.26■□□□□ 0.51
SSPO-205ENST00000475488 MS4A1P11836 297 aa18.25■□□□□ 0.51
SSPO-205ENST00000475488 ERCC6Q03468 1493 aa18.24■□□□□ 0.51
SSPO-205ENST00000475488 CARD11Q9BXL7 1154 aa18.24■□□□□ 0.51
SSPO-205ENST00000475488 ZNF330Q9Y3S2 320 aaPredicted RBP18.24■□□□□ 0.51
SSPO-205ENST00000475488 RTF1Q92541 710 aaKnown RBP18.24■□□□□ 0.51
SSPO-205ENST00000475488 RGS3P49796 1198 aa18.22■□□□□ 0.51
SSPO-205ENST00000475488 PAK3O75914 559 aaPredicted RBP18.21■□□□□ 0.51
SSPO-205ENST00000475488 CC2D1BQ5T0F9 858 aaKnown RBP18.21■□□□□ 0.51
SSPO-205ENST00000475488 PDE4CQ08493 712 aa18.2■□□□□ 0.5
SSPO-205ENST00000475488 CSB-PGBD3P0DP91 1061 aa18.19■□□□□ 0.5
SSPO-205ENST00000475488 CFDP1Q9UEE9 299 aaPredicted RBP18.19■□□□□ 0.5
SSPO-205ENST00000475488 SRPK2P78362 688 aaKnown RBP18.18■□□□□ 0.5
SSPO-205ENST00000475488 ERICH6BQ5W0A0 696 aa18.18■□□□□ 0.5
SSPO-205ENST00000475488 HSCBQ8IWL3 235 aa18.18■□□□□ 0.5
SSPO-205ENST00000475488 KANK1Q14678 1352 aa18.18■□□□□ 0.5
SSPO-205ENST00000475488 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.15■□□□□ 0.5
SSPO-205ENST00000475488 KIAA1211Q6ZU35 1233 aa18.15■□□□□ 0.5
SSPO-205ENST00000475488 AMER1Q5JTC6 1135 aaPredicted RBP18.15■□□□□ 0.5
SSPO-205ENST00000475488 A0A0U1RQG5 324 aaPredicted RBP18.14■□□□□ 0.5
SSPO-205ENST00000475488 MSNP26038 577 aaKnown RBP18.13■□□□□ 0.49
SSPO-205ENST00000475488 ZCCHC6Q5VYS8 1495 aaKnown RBP18.13■□□□□ 0.49
SSPO-205ENST00000475488 TAF7LQ5H9L4 462 aa18.12■□□□□ 0.49
SSPO-205ENST00000475488 CHMP3Q9Y3E7 222 aa18.11■□□□□ 0.49
SSPO-205ENST00000475488 GORABQ5T7V8 394 aa18.11■□□□□ 0.49
SSPO-205ENST00000475488 SAFB2Q14151 953 aaKnown RBP eCLIP18.1■□□□□ 0.49
SSPO-205ENST00000475488 VPS53Q5VIR6 699 aa18.1■□□□□ 0.49
SSPO-205ENST00000475488 CFAP44Q96MT7 982 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms