RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 CHMP7Q8WUX9 453 aaPredicted RBP14.61□□□□□ -0.07
VAPB-204ENST00000475243 MTUS2Q5JR59 1369 aa14.59□□□□□ -0.07
VAPB-204ENST00000475243 MYH16Q9H6N6 1097 aa14.58□□□□□ -0.08
VAPB-204ENST00000475243 RGL3Q3MIN7 710 aa14.57□□□□□ -0.08
VAPB-204ENST00000475243 MIER1Q8N108 512 aa14.56□□□□□ -0.08
VAPB-204ENST00000475243 PPP1R15AO75807 674 aaPredicted RBP14.55□□□□□ -0.08
VAPB-204ENST00000475243 PPM1GO15355 546 aaPredicted RBP14.53□□□□□ -0.08
VAPB-204ENST00000475243 TPRNQ4KMQ1 711 aa14.53□□□□□ -0.08
VAPB-204ENST00000475243 EIF4G2P78344 907 aaKnown RBP eCLIP14.5□□□□□ -0.09
VAPB-204ENST00000475243 CDK11BP21127 795 aaKnown RBP14.49□□□□□ -0.09
VAPB-204ENST00000475243 HAP1P54257 671 aaPredicted RBP14.49□□□□□ -0.09
VAPB-204ENST00000475243 ARID4BQ4LE39 1312 aaPredicted RBP14.48□□□□□ -0.09
VAPB-204ENST00000475243 TULP1O00294 542 aaPredicted RBP14.48□□□□□ -0.09
VAPB-204ENST00000475243 LAS1LQ9Y4W2 734 aaKnown RBP14.46□□□□□ -0.1
VAPB-204ENST00000475243 DCAF1Q9Y4B6 1507 aa14.45□□□□□ -0.1
VAPB-204ENST00000475243 TAOK2Q9UL54 1235 aa14.44□□□□□ -0.1
VAPB-204ENST00000475243 NEUROD2Q15784 382 aa14.43□□□□□ -0.1
VAPB-204ENST00000475243 NCLP19338 710 aaKnown RBP14.42□□□□□ -0.1
VAPB-204ENST00000475243 GLIPR1L2Q4G1C9 344 aa14.42□□□□□ -0.1
VAPB-204ENST00000475243 LMOD2Q6P5Q4 547 aa14.41□□□□□ -0.1
VAPB-204ENST00000475243 CLIP1P30622 1438 aa14.41□□□□□ -0.1
VAPB-204ENST00000475243 PLEKHD1A6NEE1 506 aa14.39□□□□□ -0.11
VAPB-204ENST00000475243 TNNT2P45379 298 aaPredicted RBP14.39□□□□□ -0.11
VAPB-204ENST00000475243 BECN1Q14457 450 aa14.39□□□□□ -0.11
VAPB-204ENST00000475243 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
VAPB-204ENST00000475243 FTSJ3Q8IY81 847 aaKnown RBP14.38□□□□□ -0.11
VAPB-204ENST00000475243 KNSTRNQ9Y448 316 aa14.38□□□□□ -0.11
VAPB-204ENST00000475243 TRIM44Q96DX7 344 aaPredicted RBP14.37□□□□□ -0.11
VAPB-204ENST00000475243 SUPT16HQ9Y5B9 1047 aaKnown RBP14.37□□□□□ -0.11
VAPB-204ENST00000475243 CFAP53Q96M91 514 aa14.35□□□□□ -0.11
VAPB-204ENST00000475243 DDRGK1Q96HY6 314 aa14.34□□□□□ -0.11
VAPB-204ENST00000475243 CARD11Q9BXL7 1154 aa14.33□□□□□ -0.11
VAPB-204ENST00000475243 CFDP1Q9UEE9 299 aaPredicted RBP14.32□□□□□ -0.12
VAPB-204ENST00000475243 NPHP1O15259 732 aa14.32□□□□□ -0.12
VAPB-204ENST00000475243 GOLGA6L22H0YM25 854 aa14.31□□□□□ -0.12
VAPB-204ENST00000475243 ZRSR1Q15695 479 aaKnown RBP14.31□□□□□ -0.12
VAPB-204ENST00000475243 FRAT1Q92837 279 aaPredicted RBP14.31□□□□□ -0.12
VAPB-204ENST00000475243 CC2D1BQ5T0F9 858 aaKnown RBP14.3□□□□□ -0.12
VAPB-204ENST00000475243 CASC1Q6TDU7 716 aa14.3□□□□□ -0.12
VAPB-204ENST00000475243 POGKQ9P215 609 aa14.3□□□□□ -0.12
VAPB-204ENST00000475243 PTMAP06454 111 aaKnown RBP14.3□□□□□ -0.12
VAPB-204ENST00000475243 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
VAPB-204ENST00000475243 RGS3P49796 1198 aa14.28□□□□□ -0.12
VAPB-204ENST00000475243 DNTTIP2Q5QJE6 756 aaKnown RBP14.28□□□□□ -0.12
VAPB-204ENST00000475243 MAPK8IP3Q9UPT6 1336 aa14.27□□□□□ -0.12
VAPB-204ENST00000475243 SOX12O15370 315 aa14.27□□□□□ -0.12
VAPB-204ENST00000475243 U2SURPO15042 1029 aaKnown RBP14.26□□□□□ -0.13
VAPB-204ENST00000475243 SIN3AQ96ST3 1273 aa14.26□□□□□ -0.13
VAPB-204ENST00000475243 CDCA8Q53HL2 280 aa14.26□□□□□ -0.13
VAPB-204ENST00000475243 PLCB2Q00722 1185 aa14.26□□□□□ -0.13
VAPB-204ENST00000475243 NAP1L2Q9ULW6 460 aaPredicted RBP14.24□□□□□ -0.13
VAPB-204ENST00000475243 CEP162Q5TB80 1403 aa14.24□□□□□ -0.13
VAPB-204ENST00000475243 OS9Q13438 667 aaPredicted RBP14.24□□□□□ -0.13
VAPB-204ENST00000475243 MYO15BQ96JP2 1530 aa14.24□□□□□ -0.13
VAPB-204ENST00000475243 GOLGA3Q08378 1498 aa14.22□□□□□ -0.13
VAPB-204ENST00000475243 MLECQ14165 292 aa14.22□□□□□ -0.13
VAPB-204ENST00000475243 NUDCQ9Y266 331 aa14.21□□□□□ -0.13
VAPB-204ENST00000475243 FGD1P98174 961 aa14.2□□□□□ -0.14
VAPB-204ENST00000475243 RTN4Q9NQC3 1192 aaKnown RBP14.2□□□□□ -0.14
VAPB-204ENST00000475243 SAFB2Q14151 953 aaKnown RBP eCLIP14.19□□□□□ -0.14
VAPB-204ENST00000475243 ANP32EQ9BTT0 268 aa14.19□□□□□ -0.14
VAPB-204ENST00000475243 KCNJ4P48050 445 aa14.19□□□□□ -0.14
VAPB-204ENST00000475243 HSP90AB1P08238 724 aaKnown RBP14.18□□□□□ -0.14
VAPB-204ENST00000475243 B4GALNT3Q6L9W6 998 aa14.17□□□□□ -0.14
VAPB-204ENST00000475243 GOLGA2Q08379 1002 aa14.17□□□□□ -0.14
VAPB-204ENST00000475243 TRHP20396 242 aaPredicted RBP14.17□□□□□ -0.14
VAPB-204ENST00000475243 DCAF11Q8TEB1 546 aa14.16□□□□□ -0.14
VAPB-204ENST00000475243 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
VAPB-204ENST00000475243 SPRYD3Q8NCJ5 442 aa14.15□□□□□ -0.14
VAPB-204ENST00000475243 RB1CC1Q8TDY2 1594 aa14.14□□□□□ -0.15
VAPB-204ENST00000475243 NCBP3Q53F19 620 aaKnown RBP14.14□□□□□ -0.15
VAPB-204ENST00000475243 SRPK2P78362 688 aaKnown RBP14.13□□□□□ -0.15
VAPB-204ENST00000475243 NAP1L5Q96NT1 182 aaPredicted RBP14.12□□□□□ -0.15
VAPB-204ENST00000475243 EIF4G1Q04637 1599 aaKnown RBP14.12□□□□□ -0.15
VAPB-204ENST00000475243 BAZ1BQ9UIG0 1483 aaKnown RBP14.12□□□□□ -0.15
VAPB-204ENST00000475243 WRNQ14191 1432 aaPredicted RBP eCLIP14.11□□□□□ -0.15
VAPB-204ENST00000475243 KIF27Q86VH2 1401 aa14.11□□□□□ -0.15
VAPB-204ENST00000475243 STK26Q9P289 416 aa14.11□□□□□ -0.15
VAPB-204ENST00000475243 CCDC180Q9P1Z9 1646 aa14.11□□□□□ -0.15
VAPB-204ENST00000475243 PPP4R2Q9NY27 417 aa14.1□□□□□ -0.15
VAPB-204ENST00000475243 APBB1O00213 710 aa14.09□□□□□ -0.15
VAPB-204ENST00000475243 TMF1P82094 1093 aa14.08□□□□□ -0.16
VAPB-204ENST00000475243 ISY1Q9ULR0 285 aaKnown RBP14.07□□□□□ -0.16
VAPB-204ENST00000475243 PNNQ9H307 717 aaKnown RBP14.07□□□□□ -0.16
VAPB-204ENST00000475243 FOXD1Q16676 465 aa14.06□□□□□ -0.16
VAPB-204ENST00000475243 NOP58Q9Y2X3 529 aaKnown RBP14.06□□□□□ -0.16
VAPB-204ENST00000475243 CLSTN1O94985 981 aa14.05□□□□□ -0.16
VAPB-204ENST00000475243 CCNB3Q8WWL7 1395 aa14.05□□□□□ -0.16
VAPB-204ENST00000475243 MORC1Q86VD1 984 aa14.05□□□□□ -0.16
VAPB-204ENST00000475243 PAK3O75914 559 aaPredicted RBP14.05□□□□□ -0.16
VAPB-204ENST00000475243 GGT6Q6P531 493 aa14.04□□□□□ -0.16
VAPB-204ENST00000475243 GOLGA6L4A6NEF3 574 aa14.04□□□□□ -0.16
VAPB-204ENST00000475243 EEA1Q15075 1411 aa14.04□□□□□ -0.16
VAPB-204ENST00000475243 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
VAPB-204ENST00000475243 CHMP4BQ9H444 224 aaKnown RBP14.03□□□□□ -0.16
VAPB-204ENST00000475243 MS4A1P11836 297 aa14.02□□□□□ -0.16
VAPB-204ENST00000475243 RTF1Q92541 710 aaKnown RBP14.02□□□□□ -0.16
VAPB-204ENST00000475243 ZNF330Q9Y3S2 320 aaPredicted RBP14.02□□□□□ -0.16
VAPB-204ENST00000475243 ERICH6BQ5W0A0 696 aa14.02□□□□□ -0.17
VAPB-204ENST00000475243 HSCBQ8IWL3 235 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms