RNA–Protein interactions for RNA: ENST00000473608.1

RAB5A-207, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 868 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-207ENST00000473608 PCDH10Q9P2E7 1040 aa14.11□□□□□ -0.15
RAB5A-207ENST00000473608 C7P10643 843 aa14.1□□□□□ -0.15
RAB5A-207ENST00000473608 MAMSTRQ6ZN01 415 aa14.08□□□□□ -0.16
RAB5A-207ENST00000473608 MS4A3Q96HJ5 214 aa14.08□□□□□ -0.16
RAB5A-207ENST00000473608 ATMINO43313 823 aaPredicted RBP14.07□□□□□ -0.16
RAB5A-207ENST00000473608 POTEJP0CG39 1038 aa13.99□□□□□ -0.17
RAB5A-207ENST00000473608 SCUBE2Q9NQ36 999 aa13.96□□□□□ -0.17
RAB5A-207ENST00000473608 TSPYL2Q9H2G4 693 aaPredicted RBP13.94□□□□□ -0.18
RAB5A-207ENST00000473608 FAM163AQ96GL9 167 aaPredicted RBP13.92□□□□□ -0.18
RAB5A-207ENST00000473608 ATN1P54259 1190 aaPredicted RBP13.91□□□□□ -0.18
RAB5A-207ENST00000473608 CCDC61Q9Y6R9 512 aa13.87□□□□□ -0.19
RAB5A-207ENST00000473608 LCE2DQ5TA82 110 aaPredicted RBP13.86□□□□□ -0.19
RAB5A-207ENST00000473608 EHMT2Q96KQ7 1210 aa13.86□□□□□ -0.19
RAB5A-207ENST00000473608 KIF12Q96FN5 646 aa13.84□□□□□ -0.19
RAB5A-207ENST00000473608 BMP2KQ9NSY1 1161 aaPredicted RBP13.8□□□□□ -0.2
RAB5A-207ENST00000473608 POTEFA5A3E0 1075 aa13.77□□□□□ -0.21
RAB5A-207ENST00000473608 TIE1P35590 1138 aa13.77□□□□□ -0.21
RAB5A-207ENST00000473608 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
RAB5A-207ENST00000473608 PROM2Q8N271 834 aa13.74□□□□□ -0.21
RAB5A-207ENST00000473608 TRPC6Q9Y210 931 aa13.74□□□□□ -0.21
RAB5A-207ENST00000473608 MAP3K13O43283 966 aa13.73□□□□□ -0.21
RAB5A-207ENST00000473608 SEC24BO95487 1268 aa13.71□□□□□ -0.21
RAB5A-207ENST00000473608 MIER1Q8N108 512 aa13.66□□□□□ -0.22
RAB5A-207ENST00000473608 TTLL13PA6NNM8 815 aa13.65□□□□□ -0.22
RAB5A-207ENST00000473608 COLQQ9Y215 455 aaPredicted RBP13.65□□□□□ -0.22
RAB5A-207ENST00000473608 RASEFQ8IZ41 740 aa13.64□□□□□ -0.23
RAB5A-207ENST00000473608 CDAN1Q8IWY9 1227 aa13.63□□□□□ -0.23
RAB5A-207ENST00000473608 IER5LQ5T953 404 aa13.6□□□□□ -0.23
RAB5A-207ENST00000473608 SGIP1Q9BQI5 828 aa13.58□□□□□ -0.24
RAB5A-207ENST00000473608 TRIM35Q9UPQ4 493 aa13.58□□□□□ -0.24
RAB5A-207ENST00000473608 PCDHB13Q9Y5F0 798 aa13.54□□□□□ -0.24
RAB5A-207ENST00000473608 SLAIN1Q8ND83 568 aa13.53□□□□□ -0.24
RAB5A-207ENST00000473608 ST18O60284 1047 aa13.48□□□□□ -0.25
RAB5A-207ENST00000473608 PLCD3Q8N3E9 789 aa13.48□□□□□ -0.25
RAB5A-207ENST00000473608 ZBTB47Q9UFB7 747 aaPredicted RBP13.45□□□□□ -0.26
RAB5A-207ENST00000473608 PLCG2P16885 1265 aa13.44□□□□□ -0.26
RAB5A-207ENST00000473608 TMEM106CQ9BVX2 250 aa13.42□□□□□ -0.26
RAB5A-207ENST00000473608 IFNL1Q8IU54 200 aa13.41□□□□□ -0.26
RAB5A-207ENST00000473608 NUBP1P53384 320 aa13.38□□□□□ -0.27
RAB5A-207ENST00000473608 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
RAB5A-207ENST00000473608 TMEM121BQ9BXQ6 578 aaPredicted RBP13.35□□□□□ -0.27
RAB5A-207ENST00000473608 IRX5P78411 483 aaPredicted RBP13.34□□□□□ -0.27
RAB5A-207ENST00000473608 SNPHO15079 494 aa13.33□□□□□ -0.28
RAB5A-207ENST00000473608 MMRN1Q13201 1228 aa13.31□□□□□ -0.28
RAB5A-207ENST00000473608 SPNS2Q8IVW8 549 aa13.3□□□□□ -0.28
RAB5A-207ENST00000473608 OCEL1Q9H607 264 aa13.3□□□□□ -0.28
RAB5A-207ENST00000473608 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.27□□□□□ -0.29
RAB5A-207ENST00000473608 MARVELD3Q96A59 401 aa13.2□□□□□ -0.3
RAB5A-207ENST00000473608 DCAF8Q5TAQ9 597 aa13.18□□□□□ -0.3
RAB5A-207ENST00000473608 PYGBP11216 843 aa13.15□□□□□ -0.3
RAB5A-207ENST00000473608 PCDHB8Q9UN66 801 aa13.11□□□□□ -0.31
RAB5A-207ENST00000473608 EMP3P54852 163 aa13.1□□□□□ -0.31
RAB5A-207ENST00000473608 C3orf67Q6ZVT6 689 aa13.09□□□□□ -0.31
RAB5A-207ENST00000473608 L3MBTL3Q96JM7 780 aaPredicted RBP13.08□□□□□ -0.32
RAB5A-207ENST00000473608 GOLGA2Q08379 1002 aa13.05□□□□□ -0.32
RAB5A-207ENST00000473608 PDCD7Q8N8D1 485 aaKnown RBP13.05□□□□□ -0.32
RAB5A-207ENST00000473608 MKRN3Q13064 507 aaKnown RBP13.04□□□□□ -0.32
RAB5A-207ENST00000473608 ZNF467Q7Z7K2 595 aaPredicted RBP13□□□□□ -0.33
RAB5A-207ENST00000473608 HS3ST6Q96QI5 342 aa13□□□□□ -0.33
RAB5A-207ENST00000473608 FAM205CA6NFA0 338 aa12.99□□□□□ -0.33
RAB5A-207ENST00000473608 KRTAP3-3Q9BYR6 98 aa12.98□□□□□ -0.33
RAB5A-207ENST00000473608 KRTAP3-2Q9BYR7 98 aa12.98□□□□□ -0.33
RAB5A-207ENST00000473608 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.333e-6■■■□□ 15.8
RAB5A-207ENST00000473608 POTEB3A0JP26 581 aa12.94□□□□□ -0.34
RAB5A-207ENST00000473608 POTEBQ6S5H4 581 aa12.94□□□□□ -0.34
RAB5A-207ENST00000473608 FKBP8Q14318 412 aa12.93□□□□□ -0.34
RAB5A-207ENST00000473608 GSE1Q14687 1217 aa12.93□□□□□ -0.34
RAB5A-207ENST00000473608 FBXO3Q9UK99 471 aa12.91□□□□□ -0.34
RAB5A-207ENST00000473608 PSEN1P49768 467 aa12.88□□□□□ -0.35
RAB5A-207ENST00000473608 CHRM1P11229 460 aaPredicted RBP12.86□□□□□ -0.35
RAB5A-207ENST00000473608 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
RAB5A-207ENST00000473608 G3V3G9 751 aa12.83□□□□□ -0.36
RAB5A-207ENST00000473608 ILDR1Q86SU0 546 aaPredicted RBP12.82□□□□□ -0.36
RAB5A-207ENST00000473608 ZNF710Q8N1W2 664 aa12.79□□□□□ -0.36
RAB5A-207ENST00000473608 DPY19L2Q6NUT2 758 aa12.78□□□□□ -0.36
RAB5A-207ENST00000473608 BOLA1Q9Y3E2 137 aa12.78□□□□□ -0.36
RAB5A-207ENST00000473608 HOXB3P14651 431 aaPredicted RBP12.77□□□□□ -0.37
RAB5A-207ENST00000473608 HOXB1P14653 301 aaPredicted RBP12.77□□□□□ -0.37
RAB5A-207ENST00000473608 PDAP1Q13442 181 aaKnown RBP12.77□□□□□ -0.37
RAB5A-207ENST00000473608 ERBB3P21860 1342 aa12.74□□□□□ -0.37
RAB5A-207ENST00000473608 DOK7Q18PE1 504 aa12.73□□□□□ -0.37
RAB5A-207ENST00000473608 RNF166Q96A37 237 aaPredicted RBP12.72□□□□□ -0.37
RAB5A-207ENST00000473608 CABP2Q9NPB3 220 aa12.72□□□□□ -0.37
RAB5A-207ENST00000473608 VASPP50552 380 aaPredicted RBP12.71□□□□□ -0.37
RAB5A-207ENST00000473608 RIMBP2O15034 1052 aa12.68□□□□□ -0.38
RAB5A-207ENST00000473608 MYT1LQ9UL68 1186 aa12.63□□□□□ -0.39
RAB5A-207ENST00000473608 VARS2Q5ST30 1063 aaKnown RBP12.62□□□□□ -0.39
RAB5A-207ENST00000473608 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
RAB5A-207ENST00000473608 ZSWIM6Q9HCJ5 1215 aa12.57□□□□□ -0.4
RAB5A-207ENST00000473608 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
RAB5A-207ENST00000473608 PTGER2P43116 358 aa12.53□□□□□ -0.4
RAB5A-207ENST00000473608 SPOCK2Q92563 424 aa12.53□□□□□ -0.4
RAB5A-207ENST00000473608 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
RAB5A-207ENST00000473608 GPR153Q6NV75 609 aa12.47□□□□□ -0.41
RAB5A-207ENST00000473608 MICALL2Q8IY33 904 aa12.46□□□□□ -0.41
RAB5A-207ENST00000473608 TMEM92Q6UXU6 159 aa12.45□□□□□ -0.42
RAB5A-207ENST00000473608 ANKRD13DQ6ZTN6 518 aa12.42□□□□□ -0.42
RAB5A-207ENST00000473608 IFNLR1Q8IU57 520 aaPredicted RBP12.41□□□□□ -0.42
RAB5A-207ENST00000473608 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
RAB5A-207ENST00000473608 SOX12O15370 315 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms