RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	ASTL	Q6HA08	431 aa	Predicted RBP	13.78	□□□□□ -0.2
BBX-223	ENST00000473542	OTUD5	Q96G74	571 aa		13.78	□□□□□ -0.2
BBX-223	ENST00000473542	ATMIN	O43313	823 aa	Predicted RBP	13.77	□□□□□ -0.21
BBX-223	ENST00000473542	FKBP8	Q14318	412 aa		13.76	□□□□□ -0.21
BBX-223	ENST00000473542	KIF12	Q96FN5	646 aa		13.76	□□□□□ -0.21
BBX-223	ENST00000473542	TRPC6	Q9Y210	931 aa		13.74	□□□□□ -0.21
BBX-223	ENST00000473542	PLEKHG5	O94827	1062 aa		13.73	□□□□□ -0.21
BBX-223	ENST00000473542	PLCD3	Q8N3E9	789 aa		13.72	□□□□□ -0.21
BBX-223	ENST00000473542	METRN	Q9UJH8	293 aa		13.71	□□□□□ -0.21
BBX-223	ENST00000473542	MAP3K13	O43283	966 aa		13.7	□□□□□ -0.22
BBX-223	ENST00000473542	ATN1	P54259	1190 aa	Predicted RBP	13.69	□□□□□ -0.22
BBX-223	ENST00000473542	POTEJ	P0CG39	1038 aa		13.66	□□□□□ -0.22
BBX-223	ENST00000473542	SLC39A7	Q92504	469 aa		13.65	□□□□□ -0.22
BBX-223	ENST00000473542	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.65	□□□□□ -0.22
BBX-223	ENST00000473542	NUBP1	P53384	320 aa		13.63	□□□□□ -0.23
BBX-223	ENST00000473542	C7	P10643	843 aa		13.62	□□□□□ -0.23
BBX-223	ENST00000473542	POTEF	A5A3E0	1075 aa		13.57	□□□□□ -0.24
BBX-223	ENST00000473542	TIE1	P35590	1138 aa		13.54	□□□□□ -0.24
BBX-223	ENST00000473542	TTLL13P	A6NNM8	815 aa		13.52	□□□□□ -0.25
BBX-223	ENST00000473542	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.52	□□□□□ -0.25
BBX-223	ENST00000473542	PCDHB13	Q9Y5F0	798 aa		13.51	□□□□□ -0.25
BBX-223	ENST00000473542	IFNL1	Q8IU54	200 aa		13.47	□□□□□ -0.25
BBX-223	ENST00000473542	COLQ	Q9Y215	455 aa	Predicted RBP	13.47	□□□□□ -0.25
BBX-223	ENST00000473542	FAM212A	Q96EL1	285 aa		13.46	□□□□□ -0.25
BBX-223	ENST00000473542	SGIP1	Q9BQI5	828 aa		13.44	□□□□□ -0.26
BBX-223	ENST00000473542	TRIM35	Q9UPQ4	493 aa		13.43	□□□□□ -0.26
BBX-223	ENST00000473542	POTEM	A6NI47	508 aa		13.4	□□□□□ -0.26
BBX-223	ENST00000473542	MAMSTR	Q6ZN01	415 aa		13.4	□□□□□ -0.26
BBX-223	ENST00000473542	PLSCR2	Q9NRY7	297 aa		13.38	□□□□□ -0.27
BBX-223	ENST00000473542	PYGB	P11216	843 aa		13.37	□□□□□ -0.27
BBX-223	ENST00000473542	DCAF8	Q5TAQ9	597 aa		13.37	□□□□□ -0.27
BBX-223	ENST00000473542	POTEG	Q6S5H5	508 aa		13.37	□□□□□ -0.27
BBX-223	ENST00000473542	SCUBE2	Q9NQ36	999 aa		13.37	□□□□□ -0.27
BBX-223	ENST00000473542	FBXO3	Q9UK99	471 aa		13.37	□□□□□ -0.27
BBX-223	ENST00000473542	SEC24B	O95487	1268 aa		13.36	□□□□□ -0.27
BBX-223	ENST00000473542	LCE2D	Q5TA82	110 aa	Predicted RBP	13.36	□□□□□ -0.27
BBX-223	ENST00000473542	TMEM106C	Q9BVX2	250 aa		13.36	□□□□□ -0.27
BBX-223	ENST00000473542	VASP	P50552	380 aa	Predicted RBP	13.31	□□□□□ -0.28
BBX-223	ENST00000473542	IER5L	Q5T953	404 aa		13.31	□□□□□ -0.28
BBX-223	ENST00000473542	FAM163A	Q96GL9	167 aa	Predicted RBP	13.29	□□□□□ -0.28
BBX-223	ENST00000473542	PCDHB8	Q9UN66	801 aa		13.29	□□□□□ -0.28
BBX-223	ENST00000473542	KLHL34	Q8N239	644 aa		13.25	□□□□□ -0.29
BBX-223	ENST00000473542	IRX5	P78411	483 aa	Predicted RBP	13.22	□□□□□ -0.29
BBX-223	ENST00000473542	PLCG2	P16885	1265 aa		13.19	□□□□□ -0.3
BBX-223	ENST00000473542	GSE1	Q14687	1217 aa		13.14	□□□□□ -0.31
BBX-223	ENST00000473542	SLAIN1	Q8ND83	568 aa		13.14	□□□□□ -0.31
BBX-223	ENST00000473542	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.11	□□□□□ -0.31
BBX-223	ENST00000473542	OCEL1	Q9H607	264 aa		13.11	□□□□□ -0.31
BBX-223	ENST00000473542	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.08	□□□□□ -0.32
BBX-223	ENST00000473542	CHRM1	P11229	460 aa	Predicted RBP	13.07	□□□□□ -0.32
BBX-223	ENST00000473542	PCDH10	Q9P2E7	1040 aa		13.05	□□□□□ -0.32
BBX-223	ENST00000473542	PDCD7	Q8N8D1	485 aa	Known RBP	13.04	□□□□□ -0.32
BBX-223	ENST00000473542	ST18	O60284	1047 aa		13.03	□□□□□ -0.32
BBX-223	ENST00000473542	PSEN1	P49768	467 aa		13.03	□□□□□ -0.32
BBX-223	ENST00000473542	SPOCK2	Q92563	424 aa		13.02	□□□□□ -0.33
BBX-223	ENST00000473542	CIZ1	Q9ULV3	898 aa	Predicted RBP	13	□□□□□ -0.33
BBX-223	ENST00000473542	MKRN3	Q13064	507 aa	Known RBP	12.97	□□□□□ -0.33
BBX-223	ENST00000473542	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.96	□□□□□ -0.33
BBX-223	ENST00000473542	GOLGA2	Q08379	1002 aa		12.95	□□□□□ -0.34
BBX-223	ENST00000473542	CDAN1	Q8IWY9	1227 aa		12.94	□□□□□ -0.34
BBX-223	ENST00000473542	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.94	□□□□□ -0.34	7e-7	■■■■□ 26
BBX-223	ENST00000473542	PDAP1	Q13442	181 aa	Known RBP	12.92	□□□□□ -0.34
BBX-223	ENST00000473542	DPY19L2	Q6NUT2	758 aa		12.9	□□□□□ -0.34
BBX-223	ENST00000473542	CABP2	Q9NPB3	220 aa		12.89	□□□□□ -0.35
BBX-223	ENST00000473542	ILDR1	Q86SU0	546 aa	Predicted RBP	12.87	□□□□□ -0.35
BBX-223	ENST00000473542	C3orf67	Q6ZVT6	689 aa		12.86	□□□□□ -0.35
BBX-223	ENST00000473542	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.85	□□□□□ -0.35
BBX-223	ENST00000473542	MARVELD3	Q96A59	401 aa		12.84	□□□□□ -0.35
BBX-223	ENST00000473542	SNPH	O15079	494 aa		12.8	□□□□□ -0.36
BBX-223	ENST00000473542	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.78	□□□□□ -0.36
BBX-223	ENST00000473542	EFCAB3	Q8N7B9	438 aa		12.74	□□□□□ -0.37
BBX-223	ENST00000473542	BOLA1	Q9Y3E2	137 aa		12.73	□□□□□ -0.37
BBX-223	ENST00000473542	RNF25	Q96BH1	459 aa	Predicted RBP	12.72	□□□□□ -0.37
BBX-223	ENST00000473542	POTEB3	A0JP26	581 aa		12.69	□□□□□ -0.38
BBX-223	ENST00000473542	POTEB	Q6S5H4	581 aa		12.69	□□□□□ -0.38
BBX-223	ENST00000473542	TRIM41	Q8WV44	630 aa		12.69	□□□□□ -0.38
BBX-223	ENST00000473542	EMP3	P54852	163 aa		12.67	□□□□□ -0.38
BBX-223	ENST00000473542	HOXB3	P14651	431 aa	Predicted RBP	12.66	□□□□□ -0.38
BBX-223	ENST00000473542		G3V3G9	751 aa		12.65	□□□□□ -0.38
BBX-223	ENST00000473542	SPNS2	Q8IVW8	549 aa		12.64	□□□□□ -0.39
BBX-223	ENST00000473542	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.63	□□□□□ -0.39
BBX-223	ENST00000473542	RIOK3	O14730	519 aa	Known RBP	12.63	□□□□□ -0.39
BBX-223	ENST00000473542	ZFP91	Q96JP5	570 aa	Predicted RBP	12.63	□□□□□ -0.39
BBX-223	ENST00000473542	FAM205C	A6NFA0	338 aa		12.62	□□□□□ -0.39
BBX-223	ENST00000473542	HS3ST6	Q96QI5	342 aa		12.61	□□□□□ -0.39
BBX-223	ENST00000473542	MMRN1	Q13201	1228 aa		12.6	□□□□□ -0.39
BBX-223	ENST00000473542	MS4A4A	Q96JQ5	239 aa		12.6	□□□□□ -0.39
BBX-223	ENST00000473542	TMEM92	Q6UXU6	159 aa		12.58	□□□□□ -0.4
BBX-223	ENST00000473542	KRTAP3-3	Q9BYR6	98 aa		12.58	□□□□□ -0.4
BBX-223	ENST00000473542	KRTAP3-2	Q9BYR7	98 aa		12.58	□□□□□ -0.4
BBX-223	ENST00000473542	PHF8	Q9UPP1	1060 aa		12.57	□□□□□ -0.4
BBX-223	ENST00000473542	MICALL2	Q8IY33	904 aa		12.56	□□□□□ -0.4
BBX-223	ENST00000473542	VGF	O15240	615 aa	Predicted RBP	12.55	□□□□□ -0.4
BBX-223	ENST00000473542	SOX12	O15370	315 aa		12.52	□□□□□ -0.41
BBX-223	ENST00000473542	HOXB1	P14653	301 aa	Predicted RBP	12.5	□□□□□ -0.41
BBX-223	ENST00000473542	ZNF710	Q8N1W2	664 aa		12.5	□□□□□ -0.41
BBX-223	ENST00000473542	DOK7	Q18PE1	504 aa		12.48	□□□□□ -0.41
BBX-223	ENST00000473542	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.46	□□□□□ -0.41
BBX-223	ENST00000473542	FBXO22	Q8NEZ5	403 aa		12.43	□□□□□ -0.42
BBX-223	ENST00000473542	ERBB3	P21860	1342 aa		12.41	□□□□□ -0.42

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