RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 HS6ST3Q8IZP7 471 aa14.95□□□□□ -0.02
SEC22A-204ENST00000473494 CHGAP10645 457 aaKnown RBP14.93□□□□□ -0.02
SEC22A-204ENST00000473494 PAXIP1Q6ZW49 1069 aaPredicted RBP14.9□□□□□ -0.02
SEC22A-204ENST00000473494 RIOK3O14730 519 aaKnown RBP14.89□□□□□ -0.03
SEC22A-204ENST00000473494 DNAJC5Q9H3Z4 198 aa14.89□□□□□ -0.03
SEC22A-204ENST00000473494 CHRM1P11229 460 aaPredicted RBP14.88□□□□□ -0.03
SEC22A-204ENST00000473494 VSIG10Q8N0Z9 540 aa14.87□□□□□ -0.03
SEC22A-204ENST00000473494 TAOK2Q9UL54 1235 aa14.86□□□□□ -0.03
SEC22A-204ENST00000473494 CFAP44Q96MT7 982 aa14.85□□□□□ -0.03
SEC22A-204ENST00000473494 SPRYD3Q8NCJ5 442 aa14.83□□□□□ -0.04
SEC22A-204ENST00000473494 CHADLQ6NUI6 762 aa14.81□□□□□ -0.04
SEC22A-204ENST00000473494 VGFO15240 615 aaPredicted RBP14.8□□□□□ -0.04
SEC22A-204ENST00000473494 FARP1Q9Y4F1 1045 aaPredicted RBP14.77□□□□□ -0.05
SEC22A-204ENST00000473494 SGIP1Q9BQI5 828 aa14.76□□□□□ -0.05
SEC22A-204ENST00000473494 PYGBP11216 843 aa14.73□□□□□ -0.05
SEC22A-204ENST00000473494 FXR2P51116 673 aaKnown RBP eCLIP14.73□□□□□ -0.05
SEC22A-204ENST00000473494 PRKAR2AP13861 404 aaKnown RBP14.7□□□□□ -0.06
SEC22A-204ENST00000473494 KDM2AQ9Y2K7 1162 aa14.7□□□□□ -0.06
SEC22A-204ENST00000473494 STK25O00506 426 aa14.69□□□□□ -0.06
SEC22A-204ENST00000473494 NKX1-1Q15270 411 aaPredicted RBP14.69□□□□□ -0.06
SEC22A-204ENST00000473494 TSHZ2Q9NRE2 1034 aa14.67□□□□□ -0.06
SEC22A-204ENST00000473494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.66□□□□□ -0.06
SEC22A-204ENST00000473494 ZFP91Q96JP5 570 aaPredicted RBP14.66□□□□□ -0.06
SEC22A-204ENST00000473494 TSPYL2Q9H2G4 693 aaPredicted RBP14.64□□□□□ -0.07
SEC22A-204ENST00000473494 CHRDL2Q6WN34 429 aa14.63□□□□□ -0.07
SEC22A-204ENST00000473494 BCL11BQ9C0K0 894 aaPredicted RBP14.62□□□□□ -0.07
SEC22A-204ENST00000473494 ZNF467Q7Z7K2 595 aaPredicted RBP14.61□□□□□ -0.07
SEC22A-204ENST00000473494 BCANQ96GW7 911 aa14.61□□□□□ -0.07
SEC22A-204ENST00000473494 GTPBP6O43824 516 aaPredicted RBP14.6□□□□□ -0.07
SEC22A-204ENST00000473494 CCDC61Q9Y6R9 512 aa14.6□□□□□ -0.07
SEC22A-204ENST00000473494 STK24Q9Y6E0 443 aa14.59□□□□□ -0.07
SEC22A-204ENST00000473494 PIP4P2Q8N4L2 257 aa14.56□□□□□ -0.08
SEC22A-204ENST00000473494 RYDENQ9NUL5 291 aaKnown RBP14.52□□□□□ -0.09
SEC22A-204ENST00000473494 PDAP1Q13442 181 aaKnown RBP14.51□□□□□ -0.09
SEC22A-204ENST00000473494 PAK3O75914 559 aaPredicted RBP14.5□□□□□ -0.09
SEC22A-204ENST00000473494 ZNF579Q8NAF0 562 aaKnown RBP14.5□□□□□ -0.09
SEC22A-204ENST00000473494 PCDHB8Q9UN66 801 aa14.46□□□□□ -0.09
SEC22A-204ENST00000473494 PCDHB13Q9Y5F0 798 aa14.46□□□□□ -0.09
SEC22A-204ENST00000473494 PSEN1P49768 467 aa14.4□□□□□ -0.1
SEC22A-204ENST00000473494 KIF12Q96FN5 646 aa14.4□□□□□ -0.1
SEC22A-204ENST00000473494 IFNL1Q8IU54 200 aa14.38□□□□□ -0.11
SEC22A-204ENST00000473494 MAP3K13O43283 966 aa14.36□□□□□ -0.11
SEC22A-204ENST00000473494 CD44P16070 742 aaKnown RBP14.33□□□□□ -0.12
SEC22A-204ENST00000473494 ZRANB1Q9UGI0 708 aa14.31□□□□□ -0.12
SEC22A-204ENST00000473494 MFRPQ9BY79 579 aa14.3□□□□□ -0.12
SEC22A-204ENST00000473494 PHF12Q96QT6 1004 aa14.26□□□□□ -0.13
SEC22A-204ENST00000473494 CABP2Q9NPB3 220 aa14.22□□□□□ -0.13
SEC22A-204ENST00000473494 C19orf67A6NJJ6 358 aa14.21□□□□□ -0.13
SEC22A-204ENST00000473494 NBR1Q14596 966 aa14.21□□□□□ -0.13
SEC22A-204ENST00000473494 EFCAB3Q8N7B9 438 aa14.2□□□□□ -0.14
SEC22A-204ENST00000473494 FBXO22Q8NEZ5 403 aa14.2□□□□□ -0.14
SEC22A-204ENST00000473494 SOX12O15370 315 aa14.19□□□□□ -0.14
SEC22A-204ENST00000473494 NLRP6P59044 892 aa14.17□□□□□ -0.14
SEC22A-204ENST00000473494 CADPS2Q86UW7 1296 aa14.17□□□□□ -0.14
SEC22A-204ENST00000473494 PRKCSHP14314 528 aaPredicted RBP14.13□□□□□ -0.15
SEC22A-204ENST00000473494 MS4A3Q96HJ5 214 aa14.13□□□□□ -0.15
SEC22A-204ENST00000473494 PHF8Q9UPP1 1060 aa14.13□□□□□ -0.15
SEC22A-204ENST00000473494 P3H3Q8IVL6 736 aa14.12□□□□□ -0.15
SEC22A-204ENST00000473494 PPP1R37O75864 691 aa14.09□□□□□ -0.15
SEC22A-204ENST00000473494 TPRNQ4KMQ1 711 aa14.09□□□□□ -0.15
SEC22A-204ENST00000473494 TMEM106CQ9BVX2 250 aa14.08□□□□□ -0.16
SEC22A-204ENST00000473494 TRPC6Q9Y210 931 aa14.08□□□□□ -0.16
SEC22A-204ENST00000473494 TIE1P35590 1138 aa14.04□□□□□ -0.16
SEC22A-204ENST00000473494 MS4A4AQ96JQ5 239 aa14.04□□□□□ -0.16
SEC22A-204ENST00000473494 KCNV2Q8TDN2 545 aa14.02□□□□□ -0.17
SEC22A-204ENST00000473494 WDR70Q9NW82 654 aa14.02□□□□□ -0.17
SEC22A-204ENST00000473494 GOLGA2Q08379 1002 aa14.01□□□□□ -0.17
SEC22A-204ENST00000473494 TTLL13PA6NNM8 815 aa13.98□□□□□ -0.17
SEC22A-204ENST00000473494 MKRN3Q13064 507 aaKnown RBP13.95□□□□□ -0.18
SEC22A-204ENST00000473494 ILDR1Q86SU0 546 aaPredicted RBP13.95□□□□□ -0.18
SEC22A-204ENST00000473494 BMP2KQ9NSY1 1161 aaPredicted RBP13.94□□□□□ -0.18
SEC22A-204ENST00000473494 CLCN6P51797 869 aa13.93□□□□□ -0.18
SEC22A-204ENST00000473494 GALR2O43603 387 aaPredicted RBP13.92□□□□□ -0.18
SEC22A-204ENST00000473494 NCKAP5LQ9HCH0 1330 aa13.91□□□□□ -0.18
SEC22A-204ENST00000473494 CRISPLD2Q9H0B8 497 aa13.89□□□□□ -0.19
SEC22A-204ENST00000473494 MFSD10Q14728 455 aa13.88□□□□□ -0.19
SEC22A-204ENST00000473494 TRIM35Q9UPQ4 493 aa13.87□□□□□ -0.19
SEC22A-204ENST00000473494 HAX1O00165 279 aa13.86□□□□□ -0.19
SEC22A-204ENST00000473494 ARHGEF1Q92888 912 aaKnown RBP13.86□□□□□ -0.19
SEC22A-204ENST00000473494 E2F4Q16254 413 aa13.85□□□□□ -0.19
SEC22A-204ENST00000473494 EVX2Q03828 476 aa13.83□□□□□ -0.2
SEC22A-204ENST00000473494 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.83□□□□□ -0.23e-9■■■■□ 19.5
SEC22A-204ENST00000473494 PDE4AP27815 886 aa13.82□□□□□ -0.2
SEC22A-204ENST00000473494 LARP6Q9BRS8 491 aaKnown RBP13.8□□□□□ -0.2
SEC22A-204ENST00000473494 DDX27Q96GQ7 796 aaKnown RBP13.79□□□□□ -0.2
SEC22A-204ENST00000473494 ASTLQ6HA08 431 aaPredicted RBP13.76□□□□□ -0.21
SEC22A-204ENST00000473494 PDCD7Q8N8D1 485 aaKnown RBP13.76□□□□□ -0.21
SEC22A-204ENST00000473494 ARIH1Q9Y4X5 557 aaPredicted RBP13.76□□□□□ -0.21
SEC22A-204ENST00000473494 ATN1P54259 1190 aaPredicted RBP13.75□□□□□ -0.21
SEC22A-204ENST00000473494 CAMK2BQ13554 666 aa13.75□□□□□ -0.21
SEC22A-204ENST00000473494 ATMINO43313 823 aaPredicted RBP13.74□□□□□ -0.21
SEC22A-204ENST00000473494 IER5LQ5T953 404 aa13.73□□□□□ -0.21
SEC22A-204ENST00000473494 LMOD2Q6P5Q4 547 aa13.72□□□□□ -0.21
SEC22A-204ENST00000473494 IRX5P78411 483 aaPredicted RBP13.71□□□□□ -0.21
SEC22A-204ENST00000473494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.71□□□□□ -0.21
SEC22A-204ENST00000473494 MICALL2Q8IY33 904 aa13.71□□□□□ -0.21
SEC22A-204ENST00000473494 TESPA1A2RU30 521 aaPredicted RBP13.69□□□□□ -0.22
SEC22A-204ENST00000473494 GPHNQ9NQX3 736 aaPredicted RBP13.69□□□□□ -0.22
SEC22A-204ENST00000473494 DPY19L2Q6NUT2 758 aa13.68□□□□□ -0.22
SEC22A-204ENST00000473494 TULP1O00294 542 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms