RNA–Protein interactions for RNA: ENST00000473282.6

CDK5RAP2-209, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,956 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-209ENST00000473282 NEFMP07197 916 aa11□□□□□ -0.65
CDK5RAP2-209ENST00000473282 HSP90B1P14625 803 aaKnown RBP11□□□□□ -0.65
CDK5RAP2-209ENST00000473282 ZBTB47Q9UFB7 747 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP2-209ENST00000473282 PTMAP06454 111 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP2-209ENST00000473282 TAF7LQ5H9L4 462 aa10.98□□□□□ -0.65
CDK5RAP2-209ENST00000473282 HSP90AA2PQ14568 343 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP2-209ENST00000473282 GOLGA6L22H0YM25 854 aa10.97□□□□□ -0.65
CDK5RAP2-209ENST00000473282 SLC4A1APQ9BWU0 796 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP2-209ENST00000473282 USP35Q9P2H5 1018 aa10.96□□□□□ -0.66
CDK5RAP2-209ENST00000473282 TRIM52Q96A61 297 aa10.92□□□□□ -0.66
CDK5RAP2-209ENST00000473282 RSPH6AQ9H0K4 717 aa10.92□□□□□ -0.66
CDK5RAP2-209ENST00000473282 PNNQ9H307 717 aaKnown RBP10.91□□□□□ -0.66
CDK5RAP2-209ENST00000473282 ZBTB7CA1YPR0 619 aa10.9□□□□□ -0.66
CDK5RAP2-209ENST00000473282 FBLN2P98095 1184 aa10.9□□□□□ -0.67
CDK5RAP2-209ENST00000473282 ANP32CO43423 234 aa10.86□□□□□ -0.67
CDK5RAP2-209ENST00000473282 PPM1GO15355 546 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP2-209ENST00000473282 CCDC180Q9P1Z9 1646 aa10.84□□□□□ -0.67
CDK5RAP2-209ENST00000473282 SETQ01105 290 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP2-209ENST00000473282 BRD2P25440 801 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP2-209ENST00000473282 PLEKHG5O94827 1062 aa10.83□□□□□ -0.68
CDK5RAP2-209ENST00000473282 PSMD1Q99460 953 aa10.83□□□□□ -0.68
CDK5RAP2-209ENST00000473282 ZCCHC6Q5VYS8 1495 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP2-209ENST00000473282 ARID3CA6NKF2 412 aa10.82□□□□□ -0.68
CDK5RAP2-209ENST00000473282 CHAF1AQ13111 956 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP2-209ENST00000473282 GOLGA6L6A8MZA4 724 aa10.82□□□□□ -0.68
CDK5RAP2-209ENST00000473282 P3H3Q8IVL6 736 aa10.81□□□□□ -0.68
CDK5RAP2-209ENST00000473282 CSRNP3Q8WYN3 585 aa10.8□□□□□ -0.68
CDK5RAP2-209ENST00000473282 TIMELESSQ9UNS1 1208 aa10.8□□□□□ -0.68
CDK5RAP2-209ENST00000473282 OS9Q13438 667 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP2-209ENST00000473282 LMOD2Q6P5Q4 547 aa10.77□□□□□ -0.69
CDK5RAP2-209ENST00000473282 UBE2Q2Q8WVN8 375 aa10.76□□□□□ -0.69
CDK5RAP2-209ENST00000473282 KLHL34Q8N239 644 aa10.76□□□□□ -0.69
CDK5RAP2-209ENST00000473282 TAOK2Q9UL54 1235 aa10.75□□□□□ -0.69
CDK5RAP2-209ENST00000473282 PAXIP1Q6ZW49 1069 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP2-209ENST00000473282 GOLGA6L1Q8N7Z2 621 aa10.74□□□□□ -0.69
CDK5RAP2-209ENST00000473282 CFAP44Q96MT7 982 aa10.71□□□□□ -0.7
CDK5RAP2-209ENST00000473282 TMX4Q9H1E5 349 aaPredicted RBP10.71□□□□□ -0.7
CDK5RAP2-209ENST00000473282 GOLGA6L3A6NEY3 463 aa10.7□□□□□ -0.7
CDK5RAP2-209ENST00000473282 PLCD4Q9BRC7 762 aa10.7□□□□□ -0.7
CDK5RAP2-209ENST00000473282 ANO8Q9HCE9 1232 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP2-209ENST00000473282 FBXO3Q9UK99 471 aa10.7□□□□□ -0.7
CDK5RAP2-209ENST00000473282 UPF2Q9HAU5 1272 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP2-209ENST00000473282 ZNF777Q9ULD5 760 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP2-209ENST00000473282 PPP1R1BQ9UD71 204 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP2-209ENST00000473282 MSNP26038 577 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP2-209ENST00000473282 L1TD1Q5T7N2 865 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP2-209ENST00000473282 WWC1Q8IX03 1113 aa10.68□□□□□ -0.7
CDK5RAP2-209ENST00000473282 DDRGK1Q96HY6 314 aa10.67□□□□□ -0.7
CDK5RAP2-209ENST00000473282 CC2D1BQ5T0F9 858 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP2-209ENST00000473282 TAF3Q5VWG9 929 aa10.66□□□□□ -0.7
CDK5RAP2-209ENST00000473282 FKBP8Q14318 412 aa10.65□□□□□ -0.7
CDK5RAP2-209ENST00000473282 HMGB1P1B2RPK0 211 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP2-209ENST00000473282 ZNF771Q7L3S4 317 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP2-209ENST00000473282 RB1CC1Q8TDY2 1594 aa10.63□□□□□ -0.71
CDK5RAP2-209ENST00000473282 SSR1P43307 286 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP2-209ENST00000473282 CLSTN1O94985 981 aa10.6□□□□□ -0.71
CDK5RAP2-209ENST00000473282 DHX37Q8IY37 1157 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP2-209ENST00000473282 DCAF1Q9Y4B6 1507 aa10.6□□□□□ -0.71
CDK5RAP2-209ENST00000473282 NOP58Q9Y2X3 529 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP2-209ENST00000473282 NOM1Q5C9Z4 860 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP2-209ENST00000473282 BCL11BQ9C0K0 894 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP2-209ENST00000473282 CHMP4AQ9BY43 222 aa10.56□□□□□ -0.72
CDK5RAP2-209ENST00000473282 MAP7D2Q96T17 732 aa10.56□□□□□ -0.72
CDK5RAP2-209ENST00000473282 WDR43Q15061 677 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDK5RAP2-209ENST00000473282 BBXQ8WY36 941 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP2-209ENST00000473282 PAIP2Q9BPZ3 127 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP2-209ENST00000473282 IRX3P78415 501 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP2-209ENST00000473282 BECN1Q14457 450 aa10.53□□□□□ -0.72
CDK5RAP2-209ENST00000473282 IRX6P78412 446 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP2-209ENST00000473282 CCDC66A2RUB6 948 aa10.51□□□□□ -0.73
CDK5RAP2-209ENST00000473282 TONSLQ96HA7 1378 aa10.51□□□□□ -0.73
CDK5RAP2-209ENST00000473282 AEBP1Q8IUX7 1158 aa10.51□□□□□ -0.73
CDK5RAP2-209ENST00000473282 RBM25P49756 843 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP2-209ENST00000473282 GOLGA6L4A6NEF3 574 aa10.49□□□□□ -0.73
CDK5RAP2-209ENST00000473282 CHGAP10645 457 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP2-209ENST00000473282 FAM193AP78312 1265 aa10.49□□□□□ -0.73
CDK5RAP2-209ENST00000473282 NACADO15069 1562 aa10.48□□□□□ -0.73
CDK5RAP2-209ENST00000473282 CHIC2Q9UKJ5 165 aa10.48□□□□□ -0.73
CDK5RAP2-209ENST00000473282 CLGNO14967 610 aa10.48□□□□□ -0.73
CDK5RAP2-209ENST00000473282 BCCIPQ9P287 314 aaKnown RBP eCLIP10.48□□□□□ -0.73
CDK5RAP2-209ENST00000473282 NRDCO43847 1150 aa10.47□□□□□ -0.73
CDK5RAP2-209ENST00000473282 ESF1Q9H501 851 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP2-209ENST00000473282 DDX10Q13206 875 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP2-209ENST00000473282 PAF1Q8N7H5 531 aa10.46□□□□□ -0.73
CDK5RAP2-209ENST00000473282 TSHZ2Q9NRE2 1034 aa10.46□□□□□ -0.73
CDK5RAP2-209ENST00000473282 AXDND1Q5T1B0 1012 aaPredicted RBP10.46□□□□□ -0.74
CDK5RAP2-209ENST00000473282 DYDC1Q8WWB3 177 aa10.46□□□□□ -0.74
CDK5RAP2-209ENST00000473282 STAG3Q9UJ98 1225 aa10.46□□□□□ -0.74
CDK5RAP2-209ENST00000473282 SUPT16HQ9Y5B9 1047 aaKnown RBP10.46□□□□□ -0.74
CDK5RAP2-209ENST00000473282 MAPK8IP2Q13387 824 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP2-209ENST00000473282 SALL2Q9Y467 1007 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP2-209ENST00000473282 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.45□□□□□ -0.744e-7■■■□□ 16.6
CDK5RAP2-209ENST00000473282 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP2-209ENST00000473282 NOC3LQ8WTT2 800 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP2-209ENST00000473282 MYO15BQ96JP2 1530 aa10.44□□□□□ -0.74
CDK5RAP2-209ENST00000473282 HNRNPUQ00839 825 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDK5RAP2-209ENST00000473282 FAM9BQ8IZU0 186 aa10.44□□□□□ -0.74
CDK5RAP2-209ENST00000473282 RDXP35241 583 aaKnown RBP10.44□□□□□ -0.74
CDK5RAP2-209ENST00000473282 KIAA2012Q0VF49 1180 aa10.44□□□□□ -0.74
CDK5RAP2-209ENST00000473282 TMCO5BA8MYB1 307 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms