RNA–Protein interactions for RNA: ENST00000472888.1

RFXAP-202, Transcript of regulatory factor X associated protein, humanhuman

TSL 3

Gene RFXAP, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-202ENST00000472888 CCDC61Q9Y6R9 512 aa16.03■□□□□ 0.16
RFXAP-202ENST00000472888 POTEJP0CG39 1038 aa16.02■□□□□ 0.16
RFXAP-202ENST00000472888 METRNQ9UJH8 293 aa16.01■□□□□ 0.15
RFXAP-202ENST00000472888 TSPYL2Q9H2G4 693 aaPredicted RBP16■□□□□ 0.15
RFXAP-202ENST00000472888 PLSCR2Q9NRY7 297 aa15.97■□□□□ 0.15
RFXAP-202ENST00000472888 SLC39A7Q92504 469 aa15.95■□□□□ 0.14
RFXAP-202ENST00000472888 C7P10643 843 aa15.94■□□□□ 0.14
RFXAP-202ENST00000472888 KIF12Q96FN5 646 aa15.93■□□□□ 0.14
RFXAP-202ENST00000472888 ATN1P54259 1190 aaPredicted RBP15.91■□□□□ 0.14
RFXAP-202ENST00000472888 TRPC6Q9Y210 931 aa15.89■□□□□ 0.13
RFXAP-202ENST00000472888 POTEMA6NI47 508 aa15.88■□□□□ 0.13
RFXAP-202ENST00000472888 RASEFQ8IZ41 740 aa15.85■□□□□ 0.13
RFXAP-202ENST00000472888 POTEFA5A3E0 1075 aa15.84■□□□□ 0.13
RFXAP-202ENST00000472888 BMP2KQ9NSY1 1161 aaPredicted RBP15.84■□□□□ 0.13
RFXAP-202ENST00000472888 POTEGQ6S5H5 508 aa15.83■□□□□ 0.12
RFXAP-202ENST00000472888 MAP3K13O43283 966 aa15.81■□□□□ 0.12
RFXAP-202ENST00000472888 LCE2DQ5TA82 110 aaPredicted RBP15.78■□□□□ 0.12
RFXAP-202ENST00000472888 MIER1Q8N108 512 aa15.78■□□□□ 0.12
RFXAP-202ENST00000472888 MAMSTRQ6ZN01 415 aa15.75■□□□□ 0.11
RFXAP-202ENST00000472888 TIE1P35590 1138 aa15.73■□□□□ 0.11
RFXAP-202ENST00000472888 FBXO3Q9UK99 471 aa15.71■□□□□ 0.11
RFXAP-202ENST00000472888 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
RFXAP-202ENST00000472888 TTLL13PA6NNM8 815 aa15.67■□□□□ 0.1
RFXAP-202ENST00000472888 SCUBE2Q9NQ36 999 aa15.66■□□□□ 0.1
RFXAP-202ENST00000472888 COLQQ9Y215 455 aaPredicted RBP15.66■□□□□ 0.1
RFXAP-202ENST00000472888 NUBP1P53384 320 aa15.63■□□□□ 0.09
RFXAP-202ENST00000472888 PLCD3Q8N3E9 789 aa15.6■□□□□ 0.09
RFXAP-202ENST00000472888 SGIP1Q9BQI5 828 aa15.58■□□□□ 0.08
RFXAP-202ENST00000472888 FAM163AQ96GL9 167 aaPredicted RBP15.57■□□□□ 0.08
RFXAP-202ENST00000472888 PCDH10Q9P2E7 1040 aa15.57■□□□□ 0.08
RFXAP-202ENST00000472888 PCDHB13Q9Y5F0 798 aa15.56■□□□□ 0.08
RFXAP-202ENST00000472888 TRIM35Q9UPQ4 493 aa15.55■□□□□ 0.08
RFXAP-202ENST00000472888 IFNL1Q8IU54 200 aa15.52■□□□□ 0.08
RFXAP-202ENST00000472888 IER5LQ5T953 404 aa15.51■□□□□ 0.07
RFXAP-202ENST00000472888 SEC24BO95487 1268 aa15.5■□□□□ 0.07
RFXAP-202ENST00000472888 ZBTB47Q9UFB7 747 aaPredicted RBP15.47■□□□□ 0.07
RFXAP-202ENST00000472888 FAM212AQ96EL1 285 aa15.41■□□□□ 0.06
RFXAP-202ENST00000472888 TMEM106CQ9BVX2 250 aa15.41■□□□□ 0.06
RFXAP-202ENST00000472888 VASPP50552 380 aaPredicted RBP15.38■□□□□ 0.05
RFXAP-202ENST00000472888 IRX5P78411 483 aaPredicted RBP15.35■□□□□ 0.05
RFXAP-202ENST00000472888 SLAIN1Q8ND83 568 aa15.3■□□□□ 0.04
RFXAP-202ENST00000472888 PLCG2P16885 1265 aa15.28■□□□□ 0.04
RFXAP-202ENST00000472888 PYGBP11216 843 aa15.27■□□□□ 0.04
RFXAP-202ENST00000472888 ST18O60284 1047 aa15.26■□□□□ 0.03
RFXAP-202ENST00000472888 KLHL34Q8N239 644 aa15.26■□□□□ 0.03
RFXAP-202ENST00000472888 CDAN1Q8IWY9 1227 aa15.25■□□□□ 0.03
RFXAP-202ENST00000472888 DCAF8Q5TAQ9 597 aa15.22■□□□□ 0.03
RFXAP-202ENST00000472888 PCDHB8Q9UN66 801 aa15.22■□□□□ 0.03
RFXAP-202ENST00000472888 OCEL1Q9H607 264 aa15.2■□□□□ 0.02
RFXAP-202ENST00000472888 IFNLR1Q8IU57 520 aaPredicted RBP15.1■□□□□ 0.01
RFXAP-202ENST00000472888 PDCD7Q8N8D1 485 aaKnown RBP15.1■□□□□ 0.01
RFXAP-202ENST00000472888 SPOCK2Q92563 424 aa15.06■□□□□ 0
RFXAP-202ENST00000472888 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.04■□□□□ -0
RFXAP-202ENST00000472888 TMEM121BQ9BXQ6 578 aaPredicted RBP15.02■□□□□ -0
RFXAP-202ENST00000472888 CHRM1P11229 460 aaPredicted RBP14.99□□□□□ -0.01
RFXAP-202ENST00000472888 GSE1Q14687 1217 aa14.99□□□□□ -0.01
RFXAP-202ENST00000472888 ZNF467Q7Z7K2 595 aaPredicted RBP14.99□□□□□ -0.01
RFXAP-202ENST00000472888 MARVELD3Q96A59 401 aa14.97□□□□□ -0.01
RFXAP-202ENST00000472888 SNPHO15079 494 aa14.96□□□□□ -0.01
RFXAP-202ENST00000472888 ILDR1Q86SU0 546 aaPredicted RBP14.92□□□□□ -0.02
RFXAP-202ENST00000472888 SPNS2Q8IVW8 549 aa14.92□□□□□ -0.02
RFXAP-202ENST00000472888 PSEN1P49768 467 aa14.91□□□□□ -0.02
RFXAP-202ENST00000472888 MKRN3Q13064 507 aaKnown RBP14.91□□□□□ -0.02
RFXAP-202ENST00000472888 MMRN1Q13201 1228 aa14.9□□□□□ -0.02
RFXAP-202ENST00000472888 C3orf67Q6ZVT6 689 aa14.88□□□□□ -0.03
RFXAP-202ENST00000472888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.88□□□□□ -0.03
RFXAP-202ENST00000472888 L3MBTL3Q96JM7 780 aaPredicted RBP14.87□□□□□ -0.03
RFXAP-202ENST00000472888 GOLGA2Q08379 1002 aa14.86□□□□□ -0.03
RFXAP-202ENST00000472888 CIZ1Q9ULV3 898 aaPredicted RBP14.86□□□□□ -0.03
RFXAP-202ENST00000472888 POTEB3A0JP26 581 aa14.83□□□□□ -0.04
RFXAP-202ENST00000472888 DPY19L2Q6NUT2 758 aa14.83□□□□□ -0.04
RFXAP-202ENST00000472888 POTEBQ6S5H4 581 aa14.83□□□□□ -0.04
RFXAP-202ENST00000472888 PDAP1Q13442 181 aaKnown RBP14.8□□□□□ -0.04
RFXAP-202ENST00000472888 EMP3P54852 163 aa14.78□□□□□ -0.04
RFXAP-202ENST00000472888 KRTAP3-3Q9BYR6 98 aa14.76□□□□□ -0.05
RFXAP-202ENST00000472888 KRTAP3-2Q9BYR7 98 aa14.76□□□□□ -0.05
RFXAP-202ENST00000472888 TRIM41Q8WV44 630 aa14.75□□□□□ -0.05
RFXAP-202ENST00000472888 HS3ST6Q96QI5 342 aa14.73□□□□□ -0.05
RFXAP-202ENST00000472888 CABP2Q9NPB3 220 aa14.73□□□□□ -0.05
RFXAP-202ENST00000472888 HOXB3P14651 431 aaPredicted RBP14.71□□□□□ -0.05
RFXAP-202ENST00000472888 FAM205CA6NFA0 338 aa14.69□□□□□ -0.06
RFXAP-202ENST00000472888 BOLA1Q9Y3E2 137 aa14.68□□□□□ -0.06
RFXAP-202ENST00000472888 HOXB1P14653 301 aaPredicted RBP14.56□□□□□ -0.08
RFXAP-202ENST00000472888 ECM2O94769 699 aaPredicted RBP14.55□□□□□ -0.08
RFXAP-202ENST00000472888 EFCAB3Q8N7B9 438 aa14.55□□□□□ -0.08
RFXAP-202ENST00000472888 G3V3G9 751 aa14.53□□□□□ -0.08
RFXAP-202ENST00000472888 PKD2Q13563 968 aa14.5□□□□□ -0.09
RFXAP-202ENST00000472888 TMEM92Q6UXU6 159 aa14.5□□□□□ -0.09
RFXAP-202ENST00000472888 TAOK2Q9UL54 1235 aa14.49□□□□□ -0.09
RFXAP-202ENST00000472888 DOK7Q18PE1 504 aa14.47□□□□□ -0.09
RFXAP-202ENST00000472888 RIOK3O14730 519 aaKnown RBP14.46□□□□□ -0.09
RFXAP-202ENST00000472888 ZNF710Q8N1W2 664 aa14.46□□□□□ -0.09
RFXAP-202ENST00000472888 MICALL2Q8IY33 904 aa14.44□□□□□ -0.1
RFXAP-202ENST00000472888 RNF25Q96BH1 459 aaPredicted RBP14.43□□□□□ -0.1
RFXAP-202ENST00000472888 MS4A4AQ96JQ5 239 aa14.43□□□□□ -0.1
RFXAP-202ENST00000472888 ERBB3P21860 1342 aa14.41□□□□□ -0.1
RFXAP-202ENST00000472888 AMER1Q5JTC6 1135 aaPredicted RBP14.4□□□□□ -0.1
RFXAP-202ENST00000472888 VGFO15240 615 aaPredicted RBP14.39□□□□□ -0.11
RFXAP-202ENST00000472888 VARS2Q5ST30 1063 aaKnown RBP14.37□□□□□ -0.11
RFXAP-202ENST00000472888 SOX12O15370 315 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms