RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 ZBTB7CA1YPR0 619 aa10.68□□□□□ -0.7
NUP35-208ENST00000472844 CHRDL2Q6WN34 429 aa10.68□□□□□ -0.7
NUP35-208ENST00000472844 CDK11BP21127 795 aaKnown RBP10.66□□□□□ -0.7
NUP35-208ENST00000472844 VASPP50552 380 aaPredicted RBP10.66□□□□□ -0.7
NUP35-208ENST00000472844 CDK11AQ9UQ88 783 aaPredicted RBP10.66□□□□□ -0.7
NUP35-208ENST00000472844 IFNLR1Q8IU57 520 aaPredicted RBP10.61□□□□□ -0.71
NUP35-208ENST00000472844 RBM42Q9BTD8 480 aaKnown RBP10.59□□□□□ -0.71
NUP35-208ENST00000472844 HSP90B1P14625 803 aaKnown RBP10.56□□□□□ -0.72
NUP35-208ENST00000472844 BRPF1P55201 1214 aaPredicted RBP10.56□□□□□ -0.72
NUP35-208ENST00000472844 RSPH6AQ9H0K4 717 aa10.55□□□□□ -0.72
NUP35-208ENST00000472844 PLEKHG5O94827 1062 aa10.54□□□□□ -0.72
NUP35-208ENST00000472844 ECM2O94769 699 aaPredicted RBP10.53□□□□□ -0.72
NUP35-208ENST00000472844 ZMYND15Q9H091 742 aa10.53□□□□□ -0.72
NUP35-208ENST00000472844 PDIA4P13667 645 aaKnown RBP10.52□□□□□ -0.73
NUP35-208ENST00000472844 ARID3AQ99856 593 aa10.52□□□□□ -0.73
NUP35-208ENST00000472844 POLA2Q14181 598 aa10.51□□□□□ -0.73
NUP35-208ENST00000472844 IGSF3O75054 1194 aa10.47□□□□□ -0.73
NUP35-208ENST00000472844 CHMP4AQ9BY43 222 aa10.44□□□□□ -0.74
NUP35-208ENST00000472844 ATF5Q9Y2D1 282 aaPredicted RBP10.44□□□□□ -0.74
NUP35-208ENST00000472844 NEUROD2Q15784 382 aa10.42□□□□□ -0.74
NUP35-208ENST00000472844 PUS7Q96PZ0 661 aaKnown RBP10.41□□□□□ -0.74
NUP35-208ENST00000472844 NECTIN2Q92692 538 aa10.37□□□□□ -0.75
NUP35-208ENST00000472844 RGL2O15211 777 aa10.35□□□□□ -0.75
NUP35-208ENST00000472844 CHGAP10645 457 aaKnown RBP10.34□□□□□ -0.75
NUP35-208ENST00000472844 LMOD2Q6P5Q4 547 aa10.31□□□□□ -0.76
NUP35-208ENST00000472844 KCTD17Q8N5Z5 321 aa10.31□□□□□ -0.76
NUP35-208ENST00000472844 C1orf115Q9H7X2 142 aa10.3□□□□□ -0.76
NUP35-208ENST00000472844 ZBTB12Q9Y330 459 aaPredicted RBP10.3□□□□□ -0.76
NUP35-208ENST00000472844 SPDYE4A6NLX3 237 aa10.28□□□□□ -0.76
NUP35-208ENST00000472844 RAD21O60216 631 aa10.28□□□□□ -0.76
NUP35-208ENST00000472844 SPOCK2Q92563 424 aa10.28□□□□□ -0.76
NUP35-208ENST00000472844 BRD2P25440 801 aaKnown RBP10.26□□□□□ -0.77
NUP35-208ENST00000472844 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.25□□□□□ -0.77
NUP35-208ENST00000472844 PROM2Q8N271 834 aa10.25□□□□□ -0.77
NUP35-208ENST00000472844 PIP4P2Q8N4L2 257 aa10.25□□□□□ -0.77
NUP35-208ENST00000472844 HAX1O00165 279 aa10.24□□□□□ -0.77
NUP35-208ENST00000472844 UBE2Q2Q8WVN8 375 aa10.22□□□□□ -0.77
NUP35-208ENST00000472844 APBB1O00213 710 aa10.2□□□□□ -0.78
NUP35-208ENST00000472844 RGS22Q8NE09 1264 aa10.2□□□□□ -0.78
NUP35-208ENST00000472844 CCDC180Q9P1Z9 1646 aa10.18□□□□□ -0.78
NUP35-208ENST00000472844 P3H3Q8IVL6 736 aa10.18□□□□□ -0.78
NUP35-208ENST00000472844 OSCARQ8IYS5 282 aa10.18□□□□□ -0.78
NUP35-208ENST00000472844 AKT1S1Q96B36 256 aa10.18□□□□□ -0.78
NUP35-208ENST00000472844 ARID3CA6NKF2 412 aa10.17□□□□□ -0.78
NUP35-208ENST00000472844 RBM25P49756 843 aaKnown RBP10.15□□□□□ -0.78
NUP35-208ENST00000472844 MTMR7Q9Y216 660 aa10.15□□□□□ -0.78
NUP35-208ENST00000472844 PABPN1Q86U42 306 aaKnown RBP eCLIP10.14□□□□□ -0.79
NUP35-208ENST00000472844 POLR3GLQ9BT43 218 aa10.13□□□□□ -0.79
NUP35-208ENST00000472844 SLC24A3Q9HC58 644 aa10.13□□□□□ -0.79
NUP35-208ENST00000472844 TMCO4Q5TGY1 634 aa10.11□□□□□ -0.79
NUP35-208ENST00000472844 HS6ST3Q8IZP7 471 aa10.11□□□□□ -0.79
NUP35-208ENST00000472844 TRAIPQ9BWF2 469 aa10.11□□□□□ -0.79
NUP35-208ENST00000472844 DHX37Q8IY37 1157 aaKnown RBP10.1□□□□□ -0.79
NUP35-208ENST00000472844 ZC3H15Q8WU90 426 aaKnown RBP10.1□□□□□ -0.79
NUP35-208ENST00000472844 RB1CC1Q8TDY2 1594 aa10.09□□□□□ -0.79
NUP35-208ENST00000472844 EVX2Q03828 476 aa10.08□□□□□ -0.8
NUP35-208ENST00000472844 REM2Q8IYK8 340 aaPredicted RBP10.08□□□□□ -0.8
NUP35-208ENST00000472844 PLSCR2Q9NRY7 297 aa10.08□□□□□ -0.8
NUP35-208ENST00000472844 E9PSI1 815 aa10.06□□□□□ -0.8
NUP35-208ENST00000472844 FXR2P51116 673 aaKnown RBP eCLIP10.06□□□□□ -0.8
NUP35-208ENST00000472844 AEBP1Q8IUX7 1158 aa10.06□□□□□ -0.8
NUP35-208ENST00000472844 MFAP1P55081 439 aaKnown RBP10.05□□□□□ -0.8
NUP35-208ENST00000472844 FOXD4L5Q5VV16 416 aaPredicted RBP10.05□□□□□ -0.8
NUP35-208ENST00000472844 FAM9AQ8IZU1 332 aaPredicted RBP10.05□□□□□ -0.8
NUP35-208ENST00000472844 FOXD4L4Q8WXT5 416 aaPredicted RBP10.05□□□□□ -0.8
NUP35-208ENST00000472844 TAF7LQ5H9L4 462 aa10.04□□□□□ -0.8
NUP35-208ENST00000472844 LHX8Q68G74 356 aa10.04□□□□□ -0.8
NUP35-208ENST00000472844 TRIM41Q8WV44 630 aa10.03□□□□□ -0.8
NUP35-208ENST00000472844 ZNF428Q96B54 188 aa10.03□□□□□ -0.8
NUP35-208ENST00000472844 USP35Q9P2H5 1018 aa10.03□□□□□ -0.8
NUP35-208ENST00000472844 UNC13AQ9UPW8 1703 aa10.02□□□□□ -0.81
NUP35-208ENST00000472844 PDE4CQ08493 712 aa10.01□□□□□ -0.81
NUP35-208ENST00000472844 CCDC82Q8N4S0 544 aa10.01□□□□□ -0.81
NUP35-208ENST00000472844 CECR2Q9BXF3 1484 aa10.01□□□□□ -0.81
NUP35-208ENST00000472844 PITPNM1O00562 1244 aa9.99□□□□□ -0.81
NUP35-208ENST00000472844 SPDYE2BA6NHP3 402 aa9.98□□□□□ -0.81
NUP35-208ENST00000472844 GTPBP6O43824 516 aaPredicted RBP9.98□□□□□ -0.81
NUP35-208ENST00000472844 SPDYE6P0CI01 402 aa9.98□□□□□ -0.81
NUP35-208ENST00000472844 SPDYE2Q495Y8 402 aa9.98□□□□□ -0.81
NUP35-208ENST00000472844 MKRN4PQ13434 485 aaPredicted RBP9.97□□□□□ -0.81
NUP35-208ENST00000472844 RSPH4AQ5TD94 716 aa9.97□□□□□ -0.81
NUP35-208ENST00000472844 GZF1Q9H116 711 aaPredicted RBP9.97□□□□□ -0.81
NUP35-208ENST00000472844 WDR70Q9NW82 654 aa9.97□□□□□ -0.81
NUP35-208ENST00000472844 IL27Q8NEV9 243 aa9.96□□□□□ -0.82
NUP35-208ENST00000472844 MKRN3Q13064 507 aaKnown RBP9.95□□□□□ -0.82
NUP35-208ENST00000472844 CC2D2AQ9P2K1 1620 aa9.94□□□□□ -0.82
NUP35-208ENST00000472844 NKX1-1Q15270 411 aaPredicted RBP9.93□□□□□ -0.82
NUP35-208ENST00000472844 FAM177A1Q8N128 213 aaPredicted RBP9.93□□□□□ -0.82
NUP35-208ENST00000472844 KCNV2Q8TDN2 545 aa9.92□□□□□ -0.82
NUP35-208ENST00000472844 FLIIQ13045 1269 aa9.91□□□□□ -0.82
NUP35-208ENST00000472844 NEFLP07196 543 aa9.9□□□□□ -0.82
NUP35-208ENST00000472844 BCCIPQ9P287 314 aaKnown RBP eCLIP9.89□□□□□ -0.83
NUP35-208ENST00000472844 CIZ1Q9ULV3 898 aaPredicted RBP9.89□□□□□ -0.83
NUP35-208ENST00000472844 GPBP1L1Q9HC44 474 aaPredicted RBP9.87□□□□□ -0.83
NUP35-208ENST00000472844 BICRAQ9NZM4 1560 aa9.87□□□□□ -0.83
NUP35-208ENST00000472844 ZMYND10O75800 440 aa9.86□□□□□ -0.83
NUP35-208ENST00000472844 FBXW7Q969H0 707 aa9.85□□□□□ -0.83
NUP35-208ENST00000472844 ZNF692Q9BU19 519 aaPredicted RBP9.85□□□□□ -0.83
NUP35-208ENST00000472844 SSUH2Q9Y2M2 353 aa9.85□□□□□ -0.83
NUP35-208ENST00000472844 PPM1GO15355 546 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms