RNA–Protein interactions for RNA: ENST00000472612.5

PHTF1-208, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 2

Gene PHTF1, Length 943 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-208ENST00000472612 CCDC61Q9Y6R9 512 aa16.66■□□□□ 0.26
PHTF1-208ENST00000472612 MIER1Q8N108 512 aa16.65■□□□□ 0.26
PHTF1-208ENST00000472612 ATMINO43313 823 aaPredicted RBP16.63■□□□□ 0.25
PHTF1-208ENST00000472612 SLC39A7Q92504 469 aa16.59■□□□□ 0.25
PHTF1-208ENST00000472612 METRNQ9UJH8 293 aa16.59■□□□□ 0.25
PHTF1-208ENST00000472612 C7P10643 843 aa16.57■□□□□ 0.24
PHTF1-208ENST00000472612 KIF12Q96FN5 646 aa16.57■□□□□ 0.24
PHTF1-208ENST00000472612 RASEFQ8IZ41 740 aa16.52■□□□□ 0.24
PHTF1-208ENST00000472612 PLCD3Q8N3E9 789 aa16.5■□□□□ 0.23
PHTF1-208ENST00000472612 ATN1P54259 1190 aaPredicted RBP16.49■□□□□ 0.23
PHTF1-208ENST00000472612 MAP3K13O43283 966 aa16.46■□□□□ 0.23
PHTF1-208ENST00000472612 BMP2KQ9NSY1 1161 aaPredicted RBP16.43■□□□□ 0.22
PHTF1-208ENST00000472612 POTEJP0CG39 1038 aa16.41■□□□□ 0.22
PHTF1-208ENST00000472612 ZBTB47Q9UFB7 747 aaPredicted RBP16.41■□□□□ 0.22
PHTF1-208ENST00000472612 TRPC6Q9Y210 931 aa16.41■□□□□ 0.22
PHTF1-208ENST00000472612 TIE1P35590 1138 aa16.4■□□□□ 0.22
PHTF1-208ENST00000472612 MAMSTRQ6ZN01 415 aa16.39■□□□□ 0.21
PHTF1-208ENST00000472612 FKBP8Q14318 412 aa16.35■□□□□ 0.21
PHTF1-208ENST00000472612 NUBP1P53384 320 aa16.33■□□□□ 0.2
PHTF1-208ENST00000472612 PLSCR2Q9NRY7 297 aa16.33■□□□□ 0.2
PHTF1-208ENST00000472612 SGIP1Q9BQI5 828 aa16.32■□□□□ 0.2
PHTF1-208ENST00000472612 POTEMA6NI47 508 aa16.31■□□□□ 0.2
PHTF1-208ENST00000472612 SCUBE2Q9NQ36 999 aa16.3■□□□□ 0.2
PHTF1-208ENST00000472612 POTEFA5A3E0 1075 aa16.29■□□□□ 0.2
PHTF1-208ENST00000472612 TTLL13PA6NNM8 815 aa16.29■□□□□ 0.2
PHTF1-208ENST00000472612 PCDHB13Q9Y5F0 798 aa16.29■□□□□ 0.2
PHTF1-208ENST00000472612 POTEGQ6S5H5 508 aa16.25■□□□□ 0.19
PHTF1-208ENST00000472612 FAM212AQ96EL1 285 aa16.24■□□□□ 0.19
PHTF1-208ENST00000472612 SEC24BO95487 1268 aa16.21■□□□□ 0.19
PHTF1-208ENST00000472612 TRIM35Q9UPQ4 493 aa16.19■□□□□ 0.18
PHTF1-208ENST00000472612 COLQQ9Y215 455 aaPredicted RBP16.18■□□□□ 0.18
PHTF1-208ENST00000472612 IER5LQ5T953 404 aa16.17■□□□□ 0.18
PHTF1-208ENST00000472612 IFNL1Q8IU54 200 aa16.17■□□□□ 0.18
PHTF1-208ENST00000472612 FBXO3Q9UK99 471 aa16.12■□□□□ 0.17
PHTF1-208ENST00000472612 FAM163AQ96GL9 167 aaPredicted RBP16.11■□□□□ 0.17
PHTF1-208ENST00000472612 LCE2DQ5TA82 110 aaPredicted RBP16.09■□□□□ 0.17
PHTF1-208ENST00000472612 TMEM106CQ9BVX2 250 aa16.09■□□□□ 0.17
PHTF1-208ENST00000472612 PCDH10Q9P2E7 1040 aa16.08■□□□□ 0.16
PHTF1-208ENST00000472612 DCAF8Q5TAQ9 597 aa16.07■□□□□ 0.16
PHTF1-208ENST00000472612 PYGBP11216 843 aa16.01■□□□□ 0.15
PHTF1-208ENST00000472612 PLCG2P16885 1265 aa15.97■□□□□ 0.15
PHTF1-208ENST00000472612 IRX5P78411 483 aaPredicted RBP15.93■□□□□ 0.14
PHTF1-208ENST00000472612 VASPP50552 380 aaPredicted RBP15.9■□□□□ 0.14
PHTF1-208ENST00000472612 KLHL34Q8N239 644 aa15.9■□□□□ 0.14
PHTF1-208ENST00000472612 SLAIN1Q8ND83 568 aa15.9■□□□□ 0.14
PHTF1-208ENST00000472612 PCDHB8Q9UN66 801 aa15.9■□□□□ 0.14
PHTF1-208ENST00000472612 GSE1Q14687 1217 aa15.87■□□□□ 0.13
PHTF1-208ENST00000472612 OCEL1Q9H607 264 aa15.87■□□□□ 0.13
PHTF1-208ENST00000472612 ZNF467Q7Z7K2 595 aaPredicted RBP15.8■□□□□ 0.12
PHTF1-208ENST00000472612 ST18O60284 1047 aa15.76■□□□□ 0.11
PHTF1-208ENST00000472612 CHRM1P11229 460 aaPredicted RBP15.74■□□□□ 0.11
PHTF1-208ENST00000472612 CDAN1Q8IWY9 1227 aa15.72■□□□□ 0.11
PHTF1-208ENST00000472612 GOLGA2Q08379 1002 aa15.71■□□□□ 0.11
PHTF1-208ENST00000472612 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.71■□□□□ 0.11
PHTF1-208ENST00000472612 MKRN3Q13064 507 aaKnown RBP15.68■□□□□ 0.1
PHTF1-208ENST00000472612 PDCD7Q8N8D1 485 aaKnown RBP15.66■□□□□ 0.1
PHTF1-208ENST00000472612 PSEN1P49768 467 aa15.65■□□□□ 0.1
PHTF1-208ENST00000472612 SNPHO15079 494 aa15.64■□□□□ 0.09
PHTF1-208ENST00000472612 SPOCK2Q92563 424 aa15.61■□□□□ 0.09
PHTF1-208ENST00000472612 TMEM121BQ9BXQ6 578 aaPredicted RBP15.61■□□□□ 0.09
PHTF1-208ENST00000472612 L3MBTL3Q96JM7 780 aaPredicted RBP15.6■□□□□ 0.09
PHTF1-208ENST00000472612 IFNLR1Q8IU57 520 aaPredicted RBP15.59■□□□□ 0.09
PHTF1-208ENST00000472612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.59■□□□□ 0.09
PHTF1-208ENST00000472612 C3orf67Q6ZVT6 689 aa15.58■□□□□ 0.08
PHTF1-208ENST00000472612 PDAP1Q13442 181 aaKnown RBP15.56■□□□□ 0.08
PHTF1-208ENST00000472612 CIZ1Q9ULV3 898 aaPredicted RBP15.56■□□□□ 0.08
PHTF1-208ENST00000472612 ILDR1Q86SU0 546 aaPredicted RBP15.5■□□□□ 0.07
PHTF1-208ENST00000472612 MARVELD3Q96A59 401 aa15.47■□□□□ 0.07
PHTF1-208ENST00000472612 CABP2Q9NPB3 220 aa15.46■□□□□ 0.07
PHTF1-208ENST00000472612 DPY19L2Q6NUT2 758 aa15.42■□□□□ 0.06
PHTF1-208ENST00000472612 G3V3G9 751 aa15.37■□□□□ 0.05
PHTF1-208ENST00000472612 EMP3P54852 163 aa15.36■□□□□ 0.05
PHTF1-208ENST00000472612 BOLA1Q9Y3E2 137 aa15.36■□□□□ 0.05
PHTF1-208ENST00000472612 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
PHTF1-208ENST00000472612 SPNS2Q8IVW8 549 aa15.34■□□□□ 0.05
PHTF1-208ENST00000472612 MMRN1Q13201 1228 aa15.31■□□□□ 0.04
PHTF1-208ENST00000472612 EFCAB3Q8N7B9 438 aa15.26■□□□□ 0.03
PHTF1-208ENST00000472612 HS3ST6Q96QI5 342 aa15.26■□□□□ 0.03
PHTF1-208ENST00000472612 FAM205CA6NFA0 338 aa15.25■□□□□ 0.03
PHTF1-208ENST00000472612 POTEB3A0JP26 581 aa15.22■□□□□ 0.03
PHTF1-208ENST00000472612 POTEBQ6S5H4 581 aa15.22■□□□□ 0.03
PHTF1-208ENST00000472612 HOXB3P14651 431 aaPredicted RBP15.21■□□□□ 0.03
PHTF1-208ENST00000472612 KRTAP3-3Q9BYR6 98 aa15.17■□□□□ 0.02
PHTF1-208ENST00000472612 KRTAP3-2Q9BYR7 98 aa15.17■□□□□ 0.02
PHTF1-208ENST00000472612 ZNF710Q8N1W2 664 aa15.16■□□□□ 0.02
PHTF1-208ENST00000472612 DOK7Q18PE1 504 aa15.15■□□□□ 0.02
PHTF1-208ENST00000472612 RIOK3O14730 519 aaKnown RBP15.14■□□□□ 0.01
PHTF1-208ENST00000472612 HOXB1P14653 301 aaPredicted RBP15.13■□□□□ 0.01
PHTF1-208ENST00000472612 SOX12O15370 315 aa15.12■□□□□ 0.01
PHTF1-208ENST00000472612 RNF25Q96BH1 459 aaPredicted RBP15.11■□□□□ 0.01
PHTF1-208ENST00000472612 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.09■□□□□ 0.01
PHTF1-208ENST00000472612 VGFO15240 615 aaPredicted RBP15.09■□□□□ 0.01
PHTF1-208ENST00000472612 MICALL2Q8IY33 904 aa15.09■□□□□ 0.01
PHTF1-208ENST00000472612 ZFP91Q96JP5 570 aaPredicted RBP15.09■□□□□ 0.01
PHTF1-208ENST00000472612 RIMBP2O15034 1052 aa15.07■□□□□ 0
PHTF1-208ENST00000472612 ERBB3P21860 1342 aa15.05■□□□□ -0
PHTF1-208ENST00000472612 TMEM92Q6UXU6 159 aa15.04■□□□□ -0
PHTF1-208ENST00000472612 MS4A4AQ96JQ5 239 aa15.04■□□□□ -0
PHTF1-208ENST00000472612 PHF8Q9UPP1 1060 aa15.02■□□□□ -0
PHTF1-208ENST00000472612 ZSWIM6Q9HCJ5 1215 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms