RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 GSE1Q14687 1217 aa19.33■□□□□ 0.68
SGCE-210ENST00000472326 ZRANB1Q9UGI0 708 aa19.32■□□□□ 0.68
SGCE-210ENST00000472326 PKD2Q13563 968 aa19.31■□□□□ 0.68
SGCE-210ENST00000472326 EVX2Q03828 476 aa19.3■□□□□ 0.68
SGCE-210ENST00000472326 CCDC61Q9Y6R9 512 aa19.24■□□□□ 0.67
SGCE-210ENST00000472326 PYGBP11216 843 aa19.2■□□□□ 0.66
SGCE-210ENST00000472326 ECM2O94769 699 aaPredicted RBP19.17■□□□□ 0.66
SGCE-210ENST00000472326 PHF12Q96QT6 1004 aa19.17■□□□□ 0.66
SGCE-210ENST00000472326 ZNF579Q8NAF0 562 aaKnown RBP19.12■□□□□ 0.65
SGCE-210ENST00000472326 TRIM41Q8WV44 630 aa19.09■□□□□ 0.65
SGCE-210ENST00000472326 KIF12Q96FN5 646 aa19.06■□□□□ 0.64
SGCE-210ENST00000472326 CHRM1P11229 460 aaPredicted RBP19.04■□□□□ 0.64
SGCE-210ENST00000472326 MAP3K13O43283 966 aa19.03■□□□□ 0.64
SGCE-210ENST00000472326 RGL2O15211 777 aa19.02■□□□□ 0.64
SGCE-210ENST00000472326 RNF25Q96BH1 459 aaPredicted RBP18.98■□□□□ 0.63
SGCE-210ENST00000472326 PCDHB13Q9Y5F0 798 aa18.97■□□□□ 0.63
SGCE-210ENST00000472326 MS4A3Q96HJ5 214 aa18.93■□□□□ 0.62
SGCE-210ENST00000472326 PCDHB8Q9UN66 801 aa18.93■□□□□ 0.62
SGCE-210ENST00000472326 IFNL1Q8IU54 200 aa18.91■□□□□ 0.62
SGCE-210ENST00000472326 GALR2O43603 387 aaPredicted RBP18.89■□□□□ 0.61
SGCE-210ENST00000472326 SP7Q8TDD2 431 aaPredicted RBP18.89■□□□□ 0.61
SGCE-210ENST00000472326 RIOK3O14730 519 aaKnown RBP18.87■□□□□ 0.61
SGCE-210ENST00000472326 GABBR2O75899 941 aa18.87■□□□□ 0.61
SGCE-210ENST00000472326 DCAF8L2P0C7V8 631 aa18.87■□□□□ 0.61
SGCE-210ENST00000472326 SGIP1Q9BQI5 828 aa18.87■□□□□ 0.61
SGCE-210ENST00000472326 ZNF467Q7Z7K2 595 aaPredicted RBP18.85■□□□□ 0.61
SGCE-210ENST00000472326 TRPC6Q9Y210 931 aa18.81■□□□□ 0.6
SGCE-210ENST00000472326 CLCN6P51797 869 aa18.78■□□□□ 0.6
SGCE-210ENST00000472326 VGFO15240 615 aaPredicted RBP18.74■□□□□ 0.59
SGCE-210ENST00000472326 PSEN1P49768 467 aa18.71■□□□□ 0.59
SGCE-210ENST00000472326 PDAP1Q13442 181 aaKnown RBP18.71■□□□□ 0.59
SGCE-210ENST00000472326 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.7■□□□□ 0.58
SGCE-210ENST00000472326 ZFP91Q96JP5 570 aaPredicted RBP18.7■□□□□ 0.58
SGCE-210ENST00000472326 TAOK2Q9UL54 1235 aa18.66■□□□□ 0.58
SGCE-210ENST00000472326 CHGAP10645 457 aaKnown RBP18.64■□□□□ 0.57
SGCE-210ENST00000472326 TMEM106CQ9BVX2 250 aa18.63■□□□□ 0.57
SGCE-210ENST00000472326 BMP2KQ9NSY1 1161 aaPredicted RBP18.63■□□□□ 0.57
SGCE-210ENST00000472326 STK25O00506 426 aa18.61■□□□□ 0.57
SGCE-210ENST00000472326 TIE1P35590 1138 aa18.61■□□□□ 0.57
SGCE-210ENST00000472326 TTLL13PA6NNM8 815 aa18.59■□□□□ 0.57
SGCE-210ENST00000472326 BCL11BQ9C0K0 894 aaPredicted RBP18.59■□□□□ 0.57
SGCE-210ENST00000472326 STK24Q9Y6E0 443 aa18.58■□□□□ 0.56
SGCE-210ENST00000472326 DCBLD2Q96PD2 775 aa18.57■□□□□ 0.56
SGCE-210ENST00000472326 HS6ST3Q8IZP7 471 aa18.54■□□□□ 0.56
SGCE-210ENST00000472326 ATMINO43313 823 aaPredicted RBP18.53■□□□□ 0.56
SGCE-210ENST00000472326 POTEIP0CG38 1075 aa18.51■□□□□ 0.55
SGCE-210ENST00000472326 ATN1P54259 1190 aaPredicted RBP18.51■□□□□ 0.55
SGCE-210ENST00000472326 CABP2Q9NPB3 220 aa18.5■□□□□ 0.55
SGCE-210ENST00000472326 ASTLQ6HA08 431 aaPredicted RBP18.49■□□□□ 0.55
SGCE-210ENST00000472326 TRIM35Q9UPQ4 493 aa18.48■□□□□ 0.55
SGCE-210ENST00000472326 PELP1Q8IZL8 1130 aaKnown RBP18.43■□□□□ 0.54
SGCE-210ENST00000472326 EFCAB3Q8N7B9 438 aa18.41■□□□□ 0.54
SGCE-210ENST00000472326 GOLGA2Q08379 1002 aa18.4■□□□□ 0.54
SGCE-210ENST00000472326 MKRN3Q13064 507 aaKnown RBP18.34■□□□□ 0.53
SGCE-210ENST00000472326 NKX1-1Q15270 411 aaPredicted RBP18.34■□□□□ 0.53
SGCE-210ENST00000472326 BBXQ8WY36 941 aaPredicted RBP18.33■□□□□ 0.52
SGCE-210ENST00000472326 DNAJC5Q9H3Z4 198 aa18.3■□□□□ 0.52
SGCE-210ENST00000472326 PHF8Q9UPP1 1060 aa18.26■□□□□ 0.51
SGCE-210ENST00000472326 MFRPQ9BY79 579 aa18.25■□□□□ 0.51
SGCE-210ENST00000472326 SLC39A7Q92504 469 aa18.24■□□□□ 0.51
SGCE-210ENST00000472326 SOX12O15370 315 aa18.22■□□□□ 0.51
SGCE-210ENST00000472326 IER5LQ5T953 404 aa18.22■□□□□ 0.51
SGCE-210ENST00000472326 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.22■□□□□ 0.51
SGCE-210ENST00000472326 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.22■□□□□ 0.51
SGCE-210ENST00000472326 METRNQ9UJH8 293 aa18.22■□□□□ 0.51
SGCE-210ENST00000472326 C7P10643 843 aa18.19■□□□□ 0.5
SGCE-210ENST00000472326 IRX5P78411 483 aaPredicted RBP18.19■□□□□ 0.5
SGCE-210ENST00000472326 COLQQ9Y215 455 aaPredicted RBP18.18■□□□□ 0.5
SGCE-210ENST00000472326 NLRP6P59044 892 aa18.16■□□□□ 0.5
SGCE-210ENST00000472326 FBXO22Q8NEZ5 403 aa18.16■□□□□ 0.5
SGCE-210ENST00000472326 SEC24BO95487 1268 aa18.15■□□□□ 0.5
SGCE-210ENST00000472326 PAXIP1Q6ZW49 1069 aaPredicted RBP18.15■□□□□ 0.5
SGCE-210ENST00000472326 POTEFA5A3E0 1075 aa18.14■□□□□ 0.49
SGCE-210ENST00000472326 GTPBP6O43824 516 aaPredicted RBP18.14■□□□□ 0.49
SGCE-210ENST00000472326 MS4A4AQ96JQ5 239 aa18.14■□□□□ 0.49
SGCE-210ENST00000472326 CFAP44Q96MT7 982 aa18.14■□□□□ 0.49
SGCE-210ENST00000472326 PLCG2P16885 1265 aa18.13■□□□□ 0.49
SGCE-210ENST00000472326 OCEL1Q9H607 264 aa18.13■□□□□ 0.49
SGCE-210ENST00000472326 ILDR1Q86SU0 546 aaPredicted RBP18.11■□□□□ 0.49
SGCE-210ENST00000472326 PDCD7Q8N8D1 485 aaKnown RBP18.11■□□□□ 0.49
SGCE-210ENST00000472326 DPY19L2Q6NUT2 758 aa18.1■□□□□ 0.49
SGCE-210ENST00000472326 SPRYD3Q8NCJ5 442 aa18.1■□□□□ 0.49
SGCE-210ENST00000472326 PPP1R37O75864 691 aa18.04■□□□□ 0.48
SGCE-210ENST00000472326 RYDENQ9NUL5 291 aaKnown RBP18.03■□□□□ 0.48
SGCE-210ENST00000472326 PLCB2Q00722 1185 aa18.02■□□□□ 0.48
SGCE-210ENST00000472326 POTEB2H3BUK9 544 aa17.94■□□□□ 0.46
SGCE-210ENST00000472326 BOLA1Q9Y3E2 137 aa17.89■□□□□ 0.45
SGCE-210ENST00000472326 L3MBTL3Q96JM7 780 aaPredicted RBP17.87■□□□□ 0.45
SGCE-210ENST00000472326 POTEJP0CG39 1038 aa17.86■□□□□ 0.45
SGCE-210ENST00000472326 MICALL2Q8IY33 904 aa17.86■□□□□ 0.45
SGCE-210ENST00000472326 G3V3G9 751 aa17.84■□□□□ 0.45
SGCE-210ENST00000472326 TSHZ2Q9NRE2 1034 aa17.81■□□□□ 0.44
SGCE-210ENST00000472326 HAP1P54257 671 aaPredicted RBP17.8■□□□□ 0.44
SGCE-210ENST00000472326 TMEM121BQ9BXQ6 578 aaPredicted RBP17.79■□□□□ 0.44
SGCE-210ENST00000472326 CADPS2Q86UW7 1296 aa17.75■□□□□ 0.43
SGCE-210ENST00000472326 LHX8Q68G74 356 aa17.74■□□□□ 0.43
SGCE-210ENST00000472326 C3orf67Q6ZVT6 689 aa17.73■□□□□ 0.43
SGCE-210ENST00000472326 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.66■□□□□ 0.42
SGCE-210ENST00000472326 TMEM92Q6UXU6 159 aa17.65■□□□□ 0.42
SGCE-210ENST00000472326 SCUBE2Q9NQ36 999 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms