RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 GALR2O43603 387 aaPredicted RBP16.64■□□□□ 0.25
SCAF4-205ENST00000472318 NUBP1P53384 320 aa16.64■□□□□ 0.25
SCAF4-205ENST00000472318 POTEIP0CG38 1075 aa16.6■□□□□ 0.25
SCAF4-205ENST00000472318 DCBLD2Q96PD2 775 aa16.54■□□□□ 0.24
SCAF4-205ENST00000472318 MS4A3Q96HJ5 214 aa16.53■□□□□ 0.24
SCAF4-205ENST00000472318 KIF12Q96FN5 646 aa16.51■□□□□ 0.23
SCAF4-205ENST00000472318 FAM212AQ96EL1 285 aa16.5■□□□□ 0.23
SCAF4-205ENST00000472318 KLHL34Q8N239 644 aa16.45■□□□□ 0.22
SCAF4-205ENST00000472318 MAP3K13O43283 966 aa16.42■□□□□ 0.22
SCAF4-205ENST00000472318 IFNLR1Q8IU57 520 aaPredicted RBP16.41■□□□□ 0.22
SCAF4-205ENST00000472318 ASTLQ6HA08 431 aaPredicted RBP16.36■□□□□ 0.21
SCAF4-205ENST00000472318 SGIP1Q9BQI5 828 aa16.35■□□□□ 0.21
SCAF4-205ENST00000472318 DCAF8Q5TAQ9 597 aa16.34■□□□□ 0.21
SCAF4-205ENST00000472318 ATMINO43313 823 aaPredicted RBP16.31■□□□□ 0.2
SCAF4-205ENST00000472318 TRPC6Q9Y210 931 aa16.3■□□□□ 0.2
SCAF4-205ENST00000472318 PCDHB13Q9Y5F0 798 aa16.3■□□□□ 0.2
SCAF4-205ENST00000472318 SPOCK2Q92563 424 aa16.29■□□□□ 0.2
SCAF4-205ENST00000472318 GSE1Q14687 1217 aa16.28■□□□□ 0.2
SCAF4-205ENST00000472318 LHX8Q68G74 356 aa16.28■□□□□ 0.2
SCAF4-205ENST00000472318 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
SCAF4-205ENST00000472318 ABCC9O60706 1549 aa16.28■□□□□ 0.2
SCAF4-205ENST00000472318 TIE1P35590 1138 aa16.26■□□□□ 0.19
SCAF4-205ENST00000472318 BMP2KQ9NSY1 1161 aaPredicted RBP16.25■□□□□ 0.19
SCAF4-205ENST00000472318 PYGBP11216 843 aa16.24■□□□□ 0.19
SCAF4-205ENST00000472318 IFNL1Q8IU54 200 aa16.23■□□□□ 0.19
SCAF4-205ENST00000472318 ATN1P54259 1190 aaPredicted RBP16.22■□□□□ 0.19
SCAF4-205ENST00000472318 TTLL13PA6NNM8 815 aa16.17■□□□□ 0.18
SCAF4-205ENST00000472318 SLC39A7Q92504 469 aa16.17■□□□□ 0.18
SCAF4-205ENST00000472318 METRNQ9UJH8 293 aa16.15■□□□□ 0.18
SCAF4-205ENST00000472318 C7P10643 843 aa16.14■□□□□ 0.17
SCAF4-205ENST00000472318 CHRM1P11229 460 aaPredicted RBP16.14■□□□□ 0.17
SCAF4-205ENST00000472318 CIZ1Q9ULV3 898 aaPredicted RBP16.09■□□□□ 0.17
SCAF4-205ENST00000472318 PCDHB8Q9UN66 801 aa16.07■□□□□ 0.16
SCAF4-205ENST00000472318 POTEB2H3BUK9 544 aa16.06■□□□□ 0.16
SCAF4-205ENST00000472318 ZNF467Q7Z7K2 595 aaPredicted RBP16.06■□□□□ 0.16
SCAF4-205ENST00000472318 TMEM106CQ9BVX2 250 aa16.06■□□□□ 0.16
SCAF4-205ENST00000472318 TRIM35Q9UPQ4 493 aa16.06■□□□□ 0.16
SCAF4-205ENST00000472318 IER5LQ5T953 404 aa16■□□□□ 0.15
SCAF4-205ENST00000472318 POTEFA5A3E0 1075 aa15.98■□□□□ 0.15
SCAF4-205ENST00000472318 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
SCAF4-205ENST00000472318 OTUD5Q96G74 571 aa15.92■□□□□ 0.14
SCAF4-205ENST00000472318 COLQQ9Y215 455 aaPredicted RBP15.92■□□□□ 0.14
SCAF4-205ENST00000472318 POTEJP0CG39 1038 aa15.91■□□□□ 0.14
SCAF4-205ENST00000472318 SEC24BO95487 1268 aa15.88■□□□□ 0.13
SCAF4-205ENST00000472318 PSEN1P49768 467 aa15.88■□□□□ 0.13
SCAF4-205ENST00000472318 PDAP1Q13442 181 aaKnown RBP15.87■□□□□ 0.13
SCAF4-205ENST00000472318 IRX5P78411 483 aaPredicted RBP15.84■□□□□ 0.13
SCAF4-205ENST00000472318 MAMSTRQ6ZN01 415 aa15.81■□□□□ 0.12
SCAF4-205ENST00000472318 PLCG2P16885 1265 aa15.79■□□□□ 0.12
SCAF4-205ENST00000472318 RNF25Q96BH1 459 aaPredicted RBP15.78■□□□□ 0.12
SCAF4-205ENST00000472318 OCEL1Q9H607 264 aa15.75■□□□□ 0.11
SCAF4-205ENST00000472318 GOLGA2Q08379 1002 aa15.74■□□□□ 0.11
SCAF4-205ENST00000472318 SCUBE2Q9NQ36 999 aa15.74■□□□□ 0.11
SCAF4-205ENST00000472318 RIOK3O14730 519 aaKnown RBP15.73■□□□□ 0.11
SCAF4-205ENST00000472318 MKRN3Q13064 507 aaKnown RBP15.72■□□□□ 0.11
SCAF4-205ENST00000472318 PDCD7Q8N8D1 485 aaKnown RBP15.69■□□□□ 0.1
SCAF4-205ENST00000472318 CABP2Q9NPB3 220 aa15.68■□□□□ 0.1
SCAF4-205ENST00000472318 PKD2Q13563 968 aa15.66■□□□□ 0.1
SCAF4-205ENST00000472318 ILDR1Q86SU0 546 aaPredicted RBP15.66■□□□□ 0.1
SCAF4-205ENST00000472318 VGFO15240 615 aaPredicted RBP15.64■□□□□ 0.09
SCAF4-205ENST00000472318 ECM2O94769 699 aaPredicted RBP15.62■□□□□ 0.09
SCAF4-205ENST00000472318 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.62■□□□□ 0.092e-11■■■□□ 15.4
SCAF4-205ENST00000472318 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.6■□□□□ 0.09
SCAF4-205ENST00000472318 ZFP91Q96JP5 570 aaPredicted RBP15.6■□□□□ 0.09
SCAF4-205ENST00000472318 EFCAB3Q8N7B9 438 aa15.54■□□□□ 0.08
SCAF4-205ENST00000472318 TAOK2Q9UL54 1235 aa15.54■□□□□ 0.08
SCAF4-205ENST00000472318 RGL2O15211 777 aa15.51■□□□□ 0.07
SCAF4-205ENST00000472318 L3MBTL3Q96JM7 780 aaPredicted RBP15.5■□□□□ 0.07
SCAF4-205ENST00000472318 SLAIN1Q8ND83 568 aa15.48■□□□□ 0.07
SCAF4-205ENST00000472318 DPY19L2Q6NUT2 758 aa15.46■□□□□ 0.07
SCAF4-205ENST00000472318 BCL11BQ9C0K0 894 aaPredicted RBP15.45■□□□□ 0.06
SCAF4-205ENST00000472318 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.45■□□□□ 0.06
SCAF4-205ENST00000472318 SOX12O15370 315 aa15.43■□□□□ 0.06
SCAF4-205ENST00000472318 C3orf67Q6ZVT6 689 aa15.42■□□□□ 0.06
SCAF4-205ENST00000472318 STK25O00506 426 aa15.4■□□□□ 0.06
SCAF4-205ENST00000472318 LCE2DQ5TA82 110 aaPredicted RBP15.4■□□□□ 0.06
SCAF4-205ENST00000472318 STK24Q9Y6E0 443 aa15.4■□□□□ 0.06
SCAF4-205ENST00000472318 BOLA1Q9Y3E2 137 aa15.39■□□□□ 0.05
SCAF4-205ENST00000472318 CCDC180Q9P1Z9 1646 aa15.37■□□□□ 0.05
SCAF4-205ENST00000472318 MS4A4AQ96JQ5 239 aa15.36■□□□□ 0.05
SCAF4-205ENST00000472318 PHF8Q9UPP1 1060 aa15.36■□□□□ 0.05
SCAF4-205ENST00000472318 TMEM121BQ9BXQ6 578 aaPredicted RBP15.34■□□□□ 0.05
SCAF4-205ENST00000472318 G3V3G9 751 aa15.33■□□□□ 0.04
SCAF4-205ENST00000472318 FAM163AQ96GL9 167 aaPredicted RBP15.33■□□□□ 0.04
SCAF4-205ENST00000472318 POTEMA6NI47 508 aa15.3■□□□□ 0.04
SCAF4-205ENST00000472318 FBXO22Q8NEZ5 403 aa15.3■□□□□ 0.04
SCAF4-205ENST00000472318 NLRP6P59044 892 aa15.29■□□□□ 0.04
SCAF4-205ENST00000472318 POTEGQ6S5H5 508 aa15.28■□□□□ 0.04
SCAF4-205ENST00000472318 MFRPQ9BY79 579 aa15.28■□□□□ 0.04
SCAF4-205ENST00000472318 MICALL2Q8IY33 904 aa15.26■□□□□ 0.03
SCAF4-205ENST00000472318 SNPHO15079 494 aa15.23■□□□□ 0.03
SCAF4-205ENST00000472318 HS6ST3Q8IZP7 471 aa15.22■□□□□ 0.03
SCAF4-205ENST00000472318 ST18O60284 1047 aa15.21■□□□□ 0.03
SCAF4-205ENST00000472318 DNAJC5Q9H3Z4 198 aa15.21■□□□□ 0.03
SCAF4-205ENST00000472318 TMEM92Q6UXU6 159 aa15.13■□□□□ 0.01
SCAF4-205ENST00000472318 CHGAP10645 457 aaKnown RBP15.11■□□□□ 0.01
SCAF4-205ENST00000472318 HOXB3P14651 431 aaPredicted RBP15.07■□□□□ 0
SCAF4-205ENST00000472318 PCDH10Q9P2E7 1040 aa15.07■□□□□ 0
SCAF4-205ENST00000472318 RB1CC1Q8TDY2 1594 aa15.05■□□□□ -0
SCAF4-205ENST00000472318 PPP1R37O75864 691 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms