RNA–Protein interactions for RNA: ENST00000472278.1

LRRTM3-202, Transcript of leucine rich repeat transmembrane neuronal 3, humanhuman

TSL 2

Gene LRRTM3, Length 264 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3-202ENST00000472278 CDAN1Q8IWY9 1227 aa5.99□□□□□ -1.45
LRRTM3-202ENST00000472278 ASTLQ6HA08 431 aaPredicted RBP5.98□□□□□ -1.45
LRRTM3-202ENST00000472278 MS4A3Q96HJ5 214 aa5.98□□□□□ -1.45
LRRTM3-202ENST00000472278 C7P10643 843 aa5.95□□□□□ -1.46
LRRTM3-202ENST00000472278 ATN1P54259 1190 aaPredicted RBP5.93□□□□□ -1.46
LRRTM3-202ENST00000472278 SLC39A7Q92504 469 aa5.93□□□□□ -1.46
LRRTM3-202ENST00000472278 MNX1P50219 401 aaPredicted RBP5.91□□□□□ -1.46
LRRTM3-202ENST00000472278 MAMSTRQ6ZN01 415 aa5.91□□□□□ -1.46
LRRTM3-202ENST00000472278 TRPC6Q9Y210 931 aa5.91□□□□□ -1.46
LRRTM3-202ENST00000472278 MMRN1Q13201 1228 aa5.9□□□□□ -1.46
LRRTM3-202ENST00000472278 SCUBE2Q9NQ36 999 aa5.89□□□□□ -1.47
LRRTM3-202ENST00000472278 COLQQ9Y215 455 aaPredicted RBP5.88□□□□□ -1.47
LRRTM3-202ENST00000472278 SPNS2Q8IVW8 549 aa5.87□□□□□ -1.47
LRRTM3-202ENST00000472278 ST18O60284 1047 aa5.86□□□□□ -1.47
LRRTM3-202ENST00000472278 PAK3O75914 559 aaPredicted RBP5.86□□□□□ -1.47
LRRTM3-202ENST00000472278 BMP2KQ9NSY1 1161 aaPredicted RBP5.84□□□□□ -1.47
LRRTM3-202ENST00000472278 TSPYL2Q9H2G4 693 aaPredicted RBP5.8□□□□□ -1.48
LRRTM3-202ENST00000472278 CCDC61Q9Y6R9 512 aa5.78□□□□□ -1.48
LRRTM3-202ENST00000472278 KIF12Q96FN5 646 aa5.77□□□□□ -1.49
LRRTM3-202ENST00000472278 NPM1P06748 294 aaKnown RBP eCLIP5.76□□□□□ -1.49
LRRTM3-202ENST00000472278 SLAIN1Q8ND83 568 aa5.75□□□□□ -1.49
LRRTM3-202ENST00000472278 MARVELD3Q96A59 401 aa5.75□□□□□ -1.49
LRRTM3-202ENST00000472278 STAG3Q9UJ98 1225 aa5.75□□□□□ -1.49
LRRTM3-202ENST00000472278 MAP3K13O43283 966 aa5.74□□□□□ -1.49
LRRTM3-202ENST00000472278 TTLL13PA6NNM8 815 aa5.73□□□□□ -1.49
LRRTM3-202ENST00000472278 POTEB3A0JP26 581 aa5.72□□□□□ -1.49
LRRTM3-202ENST00000472278 SEC24BO95487 1268 aa5.72□□□□□ -1.49
LRRTM3-202ENST00000472278 POTEBQ6S5H4 581 aa5.72□□□□□ -1.49
LRRTM3-202ENST00000472278 TIE1P35590 1138 aa5.69□□□□□ -1.5
LRRTM3-202ENST00000472278 KRTAP3-3Q9BYR6 98 aa5.69□□□□□ -1.5
LRRTM3-202ENST00000472278 KRTAP3-2Q9BYR7 98 aa5.69□□□□□ -1.5
LRRTM3-202ENST00000472278 TRIM35Q9UPQ4 493 aa5.68□□□□□ -1.5
LRRTM3-202ENST00000472278 SPDYE4A6NLX3 237 aa5.66□□□□□ -1.5
LRRTM3-202ENST00000472278 RASEFQ8IZ41 740 aa5.64□□□□□ -1.51
LRRTM3-202ENST00000472278 FKBP8Q14318 412 aa5.61□□□□□ -1.51
LRRTM3-202ENST00000472278 IER5LQ5T953 404 aa5.61□□□□□ -1.51
LRRTM3-202ENST00000472278 TMEM121BQ9BXQ6 578 aaPredicted RBP5.61□□□□□ -1.51
LRRTM3-202ENST00000472278 IRX5P78411 483 aaPredicted RBP5.59□□□□□ -1.51
LRRTM3-202ENST00000472278 HS3ST6Q96QI5 342 aa5.58□□□□□ -1.52
LRRTM3-202ENST00000472278 FAM205CA6NFA0 338 aa5.57□□□□□ -1.52
LRRTM3-202ENST00000472278 EMP3P54852 163 aa5.57□□□□□ -1.52
LRRTM3-202ENST00000472278 IFNL1Q8IU54 200 aa5.57□□□□□ -1.52
LRRTM3-202ENST00000472278 PCDHB13Q9Y5F0 798 aa5.56□□□□□ -1.52
LRRTM3-202ENST00000472278 PLCG2P16885 1265 aa5.55□□□□□ -1.52
LRRTM3-202ENST00000472278 TMEM106CQ9BVX2 250 aa5.55□□□□□ -1.52
LRRTM3-202ENST00000472278 SNPHO15079 494 aa5.51□□□□□ -1.53
LRRTM3-202ENST00000472278 AMER1Q5JTC6 1135 aaPredicted RBP5.51□□□□□ -1.53
LRRTM3-202ENST00000472278 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.5□□□□□ -1.53
LRRTM3-202ENST00000472278 OCEL1Q9H607 264 aa5.49□□□□□ -1.53
LRRTM3-202ENST00000472278 SGIP1Q9BQI5 828 aa5.47□□□□□ -1.53
LRRTM3-202ENST00000472278 PROM2Q8N271 834 aa5.46□□□□□ -1.54
LRRTM3-202ENST00000472278 PDCD7Q8N8D1 485 aaKnown RBP5.46□□□□□ -1.54
LRRTM3-202ENST00000472278 RNF166Q96A37 237 aaPredicted RBP5.46□□□□□ -1.54
LRRTM3-202ENST00000472278 NUBP1P53384 320 aa5.45□□□□□ -1.54
LRRTM3-202ENST00000472278 MIER1Q8N108 512 aa5.44□□□□□ -1.54
LRRTM3-202ENST00000472278 HOXB3P14651 431 aaPredicted RBP5.43□□□□□ -1.54
LRRTM3-202ENST00000472278 RTN4Q9NQC3 1192 aaKnown RBP5.43□□□□□ -1.54
LRRTM3-202ENST00000472278 FBXO3Q9UK99 471 aa5.42□□□□□ -1.54
LRRTM3-202ENST00000472278 PCDHB8Q9UN66 801 aa5.41□□□□□ -1.54
LRRTM3-202ENST00000472278 MYT1LQ9UL68 1186 aa5.4□□□□□ -1.54
LRRTM3-202ENST00000472278 C3orf67Q6ZVT6 689 aa5.39□□□□□ -1.55
LRRTM3-202ENST00000472278 DPY19L2Q6NUT2 758 aa5.38□□□□□ -1.55
LRRTM3-202ENST00000472278 PYGBP11216 843 aa5.37□□□□□ -1.55
LRRTM3-202ENST00000472278 ERBB3P21860 1342 aa5.35□□□□□ -1.55
LRRTM3-202ENST00000472278 HOXB1P14653 301 aaPredicted RBP5.35□□□□□ -1.55
LRRTM3-202ENST00000472278 VARS2Q5ST30 1063 aaKnown RBP5.35□□□□□ -1.55
LRRTM3-202ENST00000472278 PLEKHG5O94827 1062 aa5.31□□□□□ -1.56
LRRTM3-202ENST00000472278 PLCD3Q8N3E9 789 aa5.31□□□□□ -1.56
LRRTM3-202ENST00000472278 L3MBTL3Q96JM7 780 aaPredicted RBP5.31□□□□□ -1.56
LRRTM3-202ENST00000472278 VASPP50552 380 aaPredicted RBP5.3□□□□□ -1.56
LRRTM3-202ENST00000472278 FAM212AQ96EL1 285 aa5.3□□□□□ -1.56
LRRTM3-202ENST00000472278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.3□□□□□ -1.56
LRRTM3-202ENST00000472278 SLC24A1O60721 1099 aa5.27□□□□□ -1.57
LRRTM3-202ENST00000472278 ANKRD13DQ6ZTN6 518 aa5.27□□□□□ -1.57
LRRTM3-202ENST00000472278 ILDR1Q86SU0 546 aaPredicted RBP5.27□□□□□ -1.57
LRRTM3-202ENST00000472278 ZNF687Q8N1G0 1237 aa5.27□□□□□ -1.57
LRRTM3-202ENST00000472278 ZNF710Q8N1W2 664 aa5.27□□□□□ -1.57
LRRTM3-202ENST00000472278 PLA2G2EQ9NZK7 142 aa5.27□□□□□ -1.57
LRRTM3-202ENST00000472278 MKRN3Q13064 507 aaKnown RBP5.26□□□□□ -1.57
LRRTM3-202ENST00000472278 DCAF8Q5TAQ9 597 aa5.26□□□□□ -1.57
LRRTM3-202ENST00000472278 TMEM92Q6UXU6 159 aa5.24□□□□□ -1.57
LRRTM3-202ENST00000472278 POTEEQ6S8J3 1075 aa5.23□□□□□ -1.57
LRRTM3-202ENST00000472278 BOLA1Q9Y3E2 137 aa5.23□□□□□ -1.57
LRRTM3-202ENST00000472278 DOK7Q18PE1 504 aa5.22□□□□□ -1.57
LRRTM3-202ENST00000472278 GPR153Q6NV75 609 aa5.22□□□□□ -1.57
LRRTM3-202ENST00000472278 KHSRPQ92945 711 aaKnown RBP eCLIP5.22□□□□□ -1.57
LRRTM3-202ENST00000472278 GOLGA2Q08379 1002 aa5.21□□□□□ -1.58
LRRTM3-202ENST00000472278 PSEN1P49768 467 aa5.2□□□□□ -1.58
LRRTM3-202ENST00000472278 IFNLR1Q8IU57 520 aaPredicted RBP5.2□□□□□ -1.58
LRRTM3-202ENST00000472278 LSM11P83369 360 aaKnown RBP eCLIP5.18□□□□□ -1.58
LRRTM3-202ENST00000472278 ARSIQ5FYB1 569 aa5.18□□□□□ -1.58
LRRTM3-202ENST00000472278 PTGER2P43116 358 aa5.17□□□□□ -1.58
LRRTM3-202ENST00000472278 ZBTB47Q9UFB7 747 aaPredicted RBP5.17□□□□□ -1.58
LRRTM3-202ENST00000472278 KLHL34Q8N239 644 aa5.16□□□□□ -1.58
LRRTM3-202ENST00000472278 SPOCK2Q92563 424 aa5.16□□□□□ -1.58
LRRTM3-202ENST00000472278 CABP2Q9NPB3 220 aa5.16□□□□□ -1.58
LRRTM3-202ENST00000472278 AXIN2Q9Y2T1 843 aa5.16□□□□□ -1.58
LRRTM3-202ENST00000472278 ZNF467Q7Z7K2 595 aaPredicted RBP5.14□□□□□ -1.59
LRRTM3-202ENST00000472278 RIMBP2O15034 1052 aa5.13□□□□□ -1.59
LRRTM3-202ENST00000472278 G3V3G9 751 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms