RNA–Protein interactions for RNA: ENST00000471640.1

NCKAP1-203, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 306 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-203ENST00000471640 METRNQ9UJH8 293 aa8.14□□□□□ -1.11
NCKAP1-203ENST00000471640 SPDYE4A6NLX3 237 aa8.13□□□□□ -1.11
NCKAP1-203ENST00000471640 ATMINO43313 823 aaPredicted RBP8.12□□□□□ -1.11
NCKAP1-203ENST00000471640 PELP1Q8IZL8 1130 aaKnown RBP8.12□□□□□ -1.11
NCKAP1-203ENST00000471640 MNX1P50219 401 aaPredicted RBP8.11□□□□□ -1.11
NCKAP1-203ENST00000471640 SCUBE2Q9NQ36 999 aa8.11□□□□□ -1.11
NCKAP1-203ENST00000471640 MS4A3Q96HJ5 214 aa8.06□□□□□ -1.12
NCKAP1-203ENST00000471640 POTEJP0CG39 1038 aa8.02□□□□□ -1.13
NCKAP1-203ENST00000471640 FAM163AQ96GL9 167 aaPredicted RBP8.02□□□□□ -1.13
NCKAP1-203ENST00000471640 CCDC61Q9Y6R9 512 aa7.99□□□□□ -1.13
NCKAP1-203ENST00000471640 PLEKHG5O94827 1062 aa7.98□□□□□ -1.13
NCKAP1-203ENST00000471640 TIE1P35590 1138 aa7.98□□□□□ -1.13
NCKAP1-203ENST00000471640 ATN1P54259 1190 aaPredicted RBP7.98□□□□□ -1.13
NCKAP1-203ENST00000471640 KIF12Q96FN5 646 aa7.97□□□□□ -1.13
NCKAP1-203ENST00000471640 LCE2DQ5TA82 110 aaPredicted RBP7.96□□□□□ -1.14
NCKAP1-203ENST00000471640 TSPYL2Q9H2G4 693 aaPredicted RBP7.96□□□□□ -1.14
NCKAP1-203ENST00000471640 IER5LQ5T953 404 aa7.93□□□□□ -1.14
NCKAP1-203ENST00000471640 SGIP1Q9BQI5 828 aa7.93□□□□□ -1.14
NCKAP1-203ENST00000471640 BMP2KQ9NSY1 1161 aaPredicted RBP7.92□□□□□ -1.14
NCKAP1-203ENST00000471640 SEC24BO95487 1268 aa7.91□□□□□ -1.14
NCKAP1-203ENST00000471640 PROM2Q8N271 834 aa7.91□□□□□ -1.14
NCKAP1-203ENST00000471640 POTEFA5A3E0 1075 aa7.89□□□□□ -1.15
NCKAP1-203ENST00000471640 FKBP8Q14318 412 aa7.89□□□□□ -1.15
NCKAP1-203ENST00000471640 CDAN1Q8IWY9 1227 aa7.89□□□□□ -1.15
NCKAP1-203ENST00000471640 MAP3K13O43283 966 aa7.87□□□□□ -1.15
NCKAP1-203ENST00000471640 TTLL13PA6NNM8 815 aa7.85□□□□□ -1.15
NCKAP1-203ENST00000471640 MIER1Q8N108 512 aa7.83□□□□□ -1.16
NCKAP1-203ENST00000471640 ZBTB47Q9UFB7 747 aaPredicted RBP7.83□□□□□ -1.16
NCKAP1-203ENST00000471640 COLQQ9Y215 455 aaPredicted RBP7.82□□□□□ -1.16
NCKAP1-203ENST00000471640 TMEM121BQ9BXQ6 578 aaPredicted RBP7.81□□□□□ -1.16
NCKAP1-203ENST00000471640 SNPHO15079 494 aa7.8□□□□□ -1.16
NCKAP1-203ENST00000471640 TRIM35Q9UPQ4 493 aa7.8□□□□□ -1.16
NCKAP1-203ENST00000471640 SLAIN1Q8ND83 568 aa7.79□□□□□ -1.16
NCKAP1-203ENST00000471640 TRPC6Q9Y210 931 aa7.79□□□□□ -1.16
NCKAP1-203ENST00000471640 ST18O60284 1047 aa7.77□□□□□ -1.17
NCKAP1-203ENST00000471640 RASEFQ8IZ41 740 aa7.77□□□□□ -1.17
NCKAP1-203ENST00000471640 PCDHB13Q9Y5F0 798 aa7.77□□□□□ -1.17
NCKAP1-203ENST00000471640 PLCG2P16885 1265 aa7.75□□□□□ -1.17
NCKAP1-203ENST00000471640 MMRN1Q13201 1228 aa7.72□□□□□ -1.17
NCKAP1-203ENST00000471640 SPNS2Q8IVW8 549 aa7.71□□□□□ -1.18
NCKAP1-203ENST00000471640 PLCD3Q8N3E9 789 aa7.71□□□□□ -1.18
NCKAP1-203ENST00000471640 TMEM106CQ9BVX2 250 aa7.7□□□□□ -1.18
NCKAP1-203ENST00000471640 OCEL1Q9H607 264 aa7.7□□□□□ -1.18
NCKAP1-203ENST00000471640 FBXO3Q9UK99 471 aa7.7□□□□□ -1.18
NCKAP1-203ENST00000471640 IRX5P78411 483 aaPredicted RBP7.69□□□□□ -1.18
NCKAP1-203ENST00000471640 FAM212AQ96EL1 285 aa7.69□□□□□ -1.18
NCKAP1-203ENST00000471640 IFNL1Q8IU54 200 aa7.68□□□□□ -1.18
NCKAP1-203ENST00000471640 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.68□□□□□ -1.18
NCKAP1-203ENST00000471640 NUBP1P53384 320 aa7.67□□□□□ -1.18
NCKAP1-203ENST00000471640 L3MBTL3Q96JM7 780 aaPredicted RBP7.6□□□□□ -1.19
NCKAP1-203ENST00000471640 VASPP50552 380 aaPredicted RBP7.56□□□□□ -1.2
NCKAP1-203ENST00000471640 C3orf67Q6ZVT6 689 aa7.55□□□□□ -1.2
NCKAP1-203ENST00000471640 EMP3P54852 163 aa7.54□□□□□ -1.2
NCKAP1-203ENST00000471640 DCAF8Q5TAQ9 597 aa7.54□□□□□ -1.2
NCKAP1-203ENST00000471640 MARVELD3Q96A59 401 aa7.54□□□□□ -1.2
NCKAP1-203ENST00000471640 MKRN3Q13064 507 aaKnown RBP7.52□□□□□ -1.21
NCKAP1-203ENST00000471640 GOLGA2Q08379 1002 aa7.51□□□□□ -1.21
NCKAP1-203ENST00000471640 ZNF467Q7Z7K2 595 aaPredicted RBP7.51□□□□□ -1.21
NCKAP1-203ENST00000471640 PYGBP11216 843 aa7.48□□□□□ -1.21
NCKAP1-203ENST00000471640 PDCD7Q8N8D1 485 aaKnown RBP7.48□□□□□ -1.21
NCKAP1-203ENST00000471640 HS3ST6Q96QI5 342 aa7.48□□□□□ -1.21
NCKAP1-203ENST00000471640 CHRM1P11229 460 aaPredicted RBP7.47□□□□□ -1.21
NCKAP1-203ENST00000471640 GSE1Q14687 1217 aa7.47□□□□□ -1.21
NCKAP1-203ENST00000471640 KRTAP3-3Q9BYR6 98 aa7.47□□□□□ -1.21
NCKAP1-203ENST00000471640 KRTAP3-2Q9BYR7 98 aa7.47□□□□□ -1.21
NCKAP1-203ENST00000471640 FAM205CA6NFA0 338 aa7.46□□□□□ -1.22
NCKAP1-203ENST00000471640 KLHL34Q8N239 644 aa7.46□□□□□ -1.22
NCKAP1-203ENST00000471640 PCDHB8Q9UN66 801 aa7.45□□□□□ -1.22
NCKAP1-203ENST00000471640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.44□□□□□ -1.229e-8■■□□□ 13.5
NCKAP1-203ENST00000471640 ILDR1Q86SU0 546 aaPredicted RBP7.43□□□□□ -1.22
NCKAP1-203ENST00000471640 IFNLR1Q8IU57 520 aaPredicted RBP7.43□□□□□ -1.22
NCKAP1-203ENST00000471640 G3V3G9 751 aa7.41□□□□□ -1.22
NCKAP1-203ENST00000471640 SPOCK2Q92563 424 aa7.4□□□□□ -1.22
NCKAP1-203ENST00000471640 POTEB3A0JP26 581 aa7.39□□□□□ -1.23
NCKAP1-203ENST00000471640 HOXB1P14653 301 aaPredicted RBP7.39□□□□□ -1.23
NCKAP1-203ENST00000471640 POTEBQ6S5H4 581 aa7.39□□□□□ -1.23
NCKAP1-203ENST00000471640 RIMBP2O15034 1052 aa7.38□□□□□ -1.23
NCKAP1-203ENST00000471640 DOK7Q18PE1 504 aa7.38□□□□□ -1.23
NCKAP1-203ENST00000471640 ZNF710Q8N1W2 664 aa7.38□□□□□ -1.23
NCKAP1-203ENST00000471640 PTGER2P43116 358 aa7.37□□□□□ -1.23
NCKAP1-203ENST00000471640 PSEN1P49768 467 aa7.37□□□□□ -1.23
NCKAP1-203ENST00000471640 BOLA1Q9Y3E2 137 aa7.36□□□□□ -1.23
NCKAP1-203ENST00000471640 PDAP1Q13442 181 aaKnown RBP7.35□□□□□ -1.23
NCKAP1-203ENST00000471640 RNF166Q96A37 237 aaPredicted RBP7.35□□□□□ -1.23
NCKAP1-203ENST00000471640 ERBB3P21860 1342 aa7.34□□□□□ -1.23
NCKAP1-203ENST00000471640 HOXB3P14651 431 aaPredicted RBP7.34□□□□□ -1.23
NCKAP1-203ENST00000471640 ZSWIM6Q9HCJ5 1215 aa7.34□□□□□ -1.23
NCKAP1-203ENST00000471640 MYT1LQ9UL68 1186 aa7.31□□□□□ -1.24
NCKAP1-203ENST00000471640 ZNF687Q8N1G0 1237 aa7.29□□□□□ -1.24
NCKAP1-203ENST00000471640 DPY19L2Q6NUT2 758 aa7.27□□□□□ -1.25
NCKAP1-203ENST00000471640 TRIM41Q8WV44 630 aa7.27□□□□□ -1.25
NCKAP1-203ENST00000471640 CIZ1Q9ULV3 898 aaPredicted RBP7.27□□□□□ -1.25
NCKAP1-203ENST00000471640 CABP2Q9NPB3 220 aa7.25□□□□□ -1.25
NCKAP1-203ENST00000471640 VARS2Q5ST30 1063 aaKnown RBP7.24□□□□□ -1.25
NCKAP1-203ENST00000471640 GPR153Q6NV75 609 aa7.19□□□□□ -1.26
NCKAP1-203ENST00000471640 SOX12O15370 315 aa7.16□□□□□ -1.26
NCKAP1-203ENST00000471640 PBX2P40425 430 aa7.13□□□□□ -1.27
NCKAP1-203ENST00000471640 PKD2Q13563 968 aa7.13□□□□□ -1.27
NCKAP1-203ENST00000471640 MICALL2Q8IY33 904 aa7.13□□□□□ -1.27
NCKAP1-203ENST00000471640 ECM2O94769 699 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms