RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 C7P10643 843 aa14.34□□□□□ -0.11
RBM39-228ENST00000471635 MAMSTRQ6ZN01 415 aa14.34□□□□□ -0.11
RBM39-228ENST00000471635 SPDYE4A6NLX3 237 aa14.33□□□□□ -0.12
RBM39-228ENST00000471635 MNX1P50219 401 aaPredicted RBP14.32□□□□□ -0.12
RBM39-228ENST00000471635 ATMINO43313 823 aaPredicted RBP14.29□□□□□ -0.12
RBM39-228ENST00000471635 MS4A3Q96HJ5 214 aa14.29□□□□□ -0.12
RBM39-228ENST00000471635 POTEJP0CG39 1038 aa14.24□□□□□ -0.13
RBM39-228ENST00000471635 SCUBE2Q9NQ36 999 aa14.21□□□□□ -0.13
RBM39-228ENST00000471635 LCE2DQ5TA82 110 aaPredicted RBP14.15□□□□□ -0.14
RBM39-228ENST00000471635 FAM163AQ96GL9 167 aaPredicted RBP14.12□□□□□ -0.15
RBM39-228ENST00000471635 ATN1P54259 1190 aaPredicted RBP14.1□□□□□ -0.15
RBM39-228ENST00000471635 TSPYL2Q9H2G4 693 aaPredicted RBP14.08□□□□□ -0.16
RBM39-228ENST00000471635 CCDC61Q9Y6R9 512 aa14.08□□□□□ -0.16
RBM39-228ENST00000471635 KIF12Q96FN5 646 aa14.02□□□□□ -0.17
RBM39-228ENST00000471635 BMP2KQ9NSY1 1161 aaPredicted RBP14.01□□□□□ -0.17
RBM39-228ENST00000471635 POTEFA5A3E0 1075 aa13.98□□□□□ -0.17
RBM39-228ENST00000471635 TIE1P35590 1138 aa13.98□□□□□ -0.17
RBM39-228ENST00000471635 SEC24BO95487 1268 aa13.9□□□□□ -0.18
RBM39-228ENST00000471635 PROM2Q8N271 834 aa13.9□□□□□ -0.18
RBM39-228ENST00000471635 TRPC6Q9Y210 931 aa13.9□□□□□ -0.18
RBM39-228ENST00000471635 MAP3K13O43283 966 aa13.89□□□□□ -0.19
RBM39-228ENST00000471635 CDAN1Q8IWY9 1227 aa13.88□□□□□ -0.19
RBM39-228ENST00000471635 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
RBM39-228ENST00000471635 TTLL13PA6NNM8 815 aa13.85□□□□□ -0.19
RBM39-228ENST00000471635 COLQQ9Y215 455 aaPredicted RBP13.85□□□□□ -0.19
RBM39-228ENST00000471635 IER5LQ5T953 404 aa13.84□□□□□ -0.19
RBM39-228ENST00000471635 RASEFQ8IZ41 740 aa13.79□□□□□ -0.2
RBM39-228ENST00000471635 SGIP1Q9BQI5 828 aa13.77□□□□□ -0.21
RBM39-228ENST00000471635 TRIM35Q9UPQ4 493 aa13.77□□□□□ -0.21
RBM39-228ENST00000471635 SLAIN1Q8ND83 568 aa13.73□□□□□ -0.21
RBM39-228ENST00000471635 MIER1Q8N108 512 aa13.72□□□□□ -0.21
RBM39-228ENST00000471635 ST18O60284 1047 aa13.71□□□□□ -0.21
RBM39-228ENST00000471635 PCDHB13Q9Y5F0 798 aa13.7□□□□□ -0.22
RBM39-228ENST00000471635 PLCG2P16885 1265 aa13.63□□□□□ -0.23
RBM39-228ENST00000471635 TMEM121BQ9BXQ6 578 aaPredicted RBP13.62□□□□□ -0.23
RBM39-228ENST00000471635 ZBTB47Q9UFB7 747 aaPredicted RBP13.6□□□□□ -0.23
RBM39-228ENST00000471635 MMRN1Q13201 1228 aa13.59□□□□□ -0.23
RBM39-228ENST00000471635 IFNL1Q8IU54 200 aa13.58□□□□□ -0.24
RBM39-228ENST00000471635 TMEM106CQ9BVX2 250 aa13.58□□□□□ -0.24
RBM39-228ENST00000471635 PLCD3Q8N3E9 789 aa13.57□□□□□ -0.24
RBM39-228ENST00000471635 SPNS2Q8IVW8 549 aa13.55□□□□□ -0.24
RBM39-228ENST00000471635 SNPHO15079 494 aa13.54□□□□□ -0.24
RBM39-228ENST00000471635 IRX5P78411 483 aaPredicted RBP13.54□□□□□ -0.24
RBM39-228ENST00000471635 NUBP1P53384 320 aa13.52□□□□□ -0.25
RBM39-228ENST00000471635 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
RBM39-228ENST00000471635 OCEL1Q9H607 264 aa13.47□□□□□ -0.25
RBM39-228ENST00000471635 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.46□□□□□ -0.25
RBM39-228ENST00000471635 FKBP8Q14318 412 aa13.43□□□□□ -0.26
RBM39-228ENST00000471635 MARVELD3Q96A59 401 aa13.41□□□□□ -0.26
RBM39-228ENST00000471635 EMP3P54852 163 aa13.31□□□□□ -0.28
RBM39-228ENST00000471635 C3orf67Q6ZVT6 689 aa13.3□□□□□ -0.28
RBM39-228ENST00000471635 PYGBP11216 843 aa13.25□□□□□ -0.29
RBM39-228ENST00000471635 DCAF8Q5TAQ9 597 aa13.23□□□□□ -0.29
RBM39-228ENST00000471635 PDCD7Q8N8D1 485 aaKnown RBP13.23□□□□□ -0.29
RBM39-228ENST00000471635 L3MBTL3Q96JM7 780 aaPredicted RBP13.23□□□□□ -0.29
RBM39-228ENST00000471635 PCDHB8Q9UN66 801 aa13.23□□□□□ -0.29
RBM39-228ENST00000471635 KRTAP3-3Q9BYR6 98 aa13.22□□□□□ -0.29
RBM39-228ENST00000471635 KRTAP3-2Q9BYR7 98 aa13.22□□□□□ -0.29
RBM39-228ENST00000471635 HS3ST6Q96QI5 342 aa13.21□□□□□ -0.29
RBM39-228ENST00000471635 GOLGA2Q08379 1002 aa13.18□□□□□ -0.3
RBM39-228ENST00000471635 FAM205CA6NFA0 338 aa13.17□□□□□ -0.3
RBM39-228ENST00000471635 MKRN3Q13064 507 aaKnown RBP13.16□□□□□ -0.3
RBM39-228ENST00000471635 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
RBM39-228ENST00000471635 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
RBM39-228ENST00000471635 ZNF467Q7Z7K2 595 aaPredicted RBP13.14□□□□□ -0.31
RBM39-228ENST00000471635 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.09□□□□□ -0.313e-37■□□□□ 9.2
RBM39-228ENST00000471635 GSE1Q14687 1217 aa13.04□□□□□ -0.32
RBM39-228ENST00000471635 ILDR1Q86SU0 546 aaPredicted RBP13.01□□□□□ -0.33
RBM39-228ENST00000471635 FBXO3Q9UK99 471 aa13.01□□□□□ -0.33
RBM39-228ENST00000471635 PSEN1P49768 467 aa12.99□□□□□ -0.33
RBM39-228ENST00000471635 CHRM1P11229 460 aaPredicted RBP12.98□□□□□ -0.33
RBM39-228ENST00000471635 G3V3G9 751 aa12.97□□□□□ -0.33
RBM39-228ENST00000471635 HOXB3P14651 431 aaPredicted RBP12.97□□□□□ -0.33
RBM39-228ENST00000471635 HOXB1P14653 301 aaPredicted RBP12.96□□□□□ -0.33
RBM39-228ENST00000471635 ZNF710Q8N1W2 664 aa12.95□□□□□ -0.34
RBM39-228ENST00000471635 RNF166Q96A37 237 aaPredicted RBP12.95□□□□□ -0.34
RBM39-228ENST00000471635 DOK7Q18PE1 504 aa12.93□□□□□ -0.34
RBM39-228ENST00000471635 BOLA1Q9Y3E2 137 aa12.93□□□□□ -0.34
RBM39-228ENST00000471635 ERBB3P21860 1342 aa12.92□□□□□ -0.34
RBM39-228ENST00000471635 PDAP1Q13442 181 aaKnown RBP12.91□□□□□ -0.34
RBM39-228ENST00000471635 DPY19L2Q6NUT2 758 aa12.89□□□□□ -0.35
RBM39-228ENST00000471635 KLHL34Q8N239 644 aa12.88□□□□□ -0.35
RBM39-228ENST00000471635 RIMBP2O15034 1052 aa12.86□□□□□ -0.35
RBM39-228ENST00000471635 VASPP50552 380 aaPredicted RBP12.86□□□□□ -0.35
RBM39-228ENST00000471635 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
RBM39-228ENST00000471635 CABP2Q9NPB3 220 aa12.83□□□□□ -0.36
RBM39-228ENST00000471635 VARS2Q5ST30 1063 aaKnown RBP12.81□□□□□ -0.36
RBM39-228ENST00000471635 PTGER2P43116 358 aa12.79□□□□□ -0.36
RBM39-228ENST00000471635 ZSWIM6Q9HCJ5 1215 aa12.77□□□□□ -0.37
RBM39-228ENST00000471635 ZNF687Q8N1G0 1237 aa12.75□□□□□ -0.37
RBM39-228ENST00000471635 IFNLR1Q8IU57 520 aaPredicted RBP12.66□□□□□ -0.38
RBM39-228ENST00000471635 GPR153Q6NV75 609 aa12.63□□□□□ -0.39
RBM39-228ENST00000471635 MICALL2Q8IY33 904 aa12.62□□□□□ -0.39
RBM39-228ENST00000471635 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
RBM39-228ENST00000471635 EFCAB3Q8N7B9 438 aa12.6□□□□□ -0.39
RBM39-228ENST00000471635 SPOCK2Q92563 424 aa12.59□□□□□ -0.39
RBM39-228ENST00000471635 TMEM92Q6UXU6 159 aa12.58□□□□□ -0.4
RBM39-228ENST00000471635 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
RBM39-228ENST00000471635 LSM11P83369 360 aaKnown RBP eCLIP12.53□□□□□ -0.4
RBM39-228ENST00000471635 TRIM41Q8WV44 630 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms