RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-208ENST00000471438 POTEJP0CG39 1038 aa9.73□□□□□ -0.85
CSMD2-208ENST00000471438 FAM163AQ96GL9 167 aaPredicted RBP9.73□□□□□ -0.85
CSMD2-208ENST00000471438 ATMINO43313 823 aaPredicted RBP9.71□□□□□ -0.86
CSMD2-208ENST00000471438 MS4A3Q96HJ5 214 aa9.7□□□□□ -0.86
CSMD2-208ENST00000471438 LCE2DQ5TA82 110 aaPredicted RBP9.69□□□□□ -0.86
CSMD2-208ENST00000471438 SCUBE2Q9NQ36 999 aa9.69□□□□□ -0.86
CSMD2-208ENST00000471438 MNX1P50219 401 aaPredicted RBP9.64□□□□□ -0.87
CSMD2-208ENST00000471438 SPDYE4A6NLX3 237 aa9.59□□□□□ -0.87
CSMD2-208ENST00000471438 ATN1P54259 1190 aaPredicted RBP9.59□□□□□ -0.87
CSMD2-208ENST00000471438 TSPYL2Q9H2G4 693 aaPredicted RBP9.55□□□□□ -0.88
CSMD2-208ENST00000471438 CDAN1Q8IWY9 1227 aa9.54□□□□□ -0.88
CSMD2-208ENST00000471438 POTEFA5A3E0 1075 aa9.52□□□□□ -0.89
CSMD2-208ENST00000471438 CCDC61Q9Y6R9 512 aa9.5□□□□□ -0.89
CSMD2-208ENST00000471438 BMP2KQ9NSY1 1161 aaPredicted RBP9.49□□□□□ -0.89
CSMD2-208ENST00000471438 KIF12Q96FN5 646 aa9.48□□□□□ -0.89
CSMD2-208ENST00000471438 SEC24BO95487 1268 aa9.46□□□□□ -0.9
CSMD2-208ENST00000471438 TIE1P35590 1138 aa9.45□□□□□ -0.9
CSMD2-208ENST00000471438 TRPC6Q9Y210 931 aa9.45□□□□□ -0.9
CSMD2-208ENST00000471438 COLQQ9Y215 455 aaPredicted RBP9.42□□□□□ -0.9
CSMD2-208ENST00000471438 MAP3K13O43283 966 aa9.4□□□□□ -0.9
CSMD2-208ENST00000471438 ST18O60284 1047 aa9.38□□□□□ -0.91
CSMD2-208ENST00000471438 TTLL13PA6NNM8 815 aa9.37□□□□□ -0.91
CSMD2-208ENST00000471438 SLAIN1Q8ND83 568 aa9.37□□□□□ -0.91
CSMD2-208ENST00000471438 CSRNP3Q8WYN3 585 aa9.37□□□□□ -0.91
CSMD2-208ENST00000471438 MMRN1Q13201 1228 aa9.34□□□□□ -0.91
CSMD2-208ENST00000471438 IER5LQ5T953 404 aa9.34□□□□□ -0.91
CSMD2-208ENST00000471438 TRIM35Q9UPQ4 493 aa9.33□□□□□ -0.92
CSMD2-208ENST00000471438 SPNS2Q8IVW8 549 aa9.31□□□□□ -0.92
CSMD2-208ENST00000471438 PLEKHG5O94827 1062 aa9.3□□□□□ -0.92
CSMD2-208ENST00000471438 RASEFQ8IZ41 740 aa9.28□□□□□ -0.92
CSMD2-208ENST00000471438 SGIP1Q9BQI5 828 aa9.25□□□□□ -0.93
CSMD2-208ENST00000471438 PCDHB13Q9Y5F0 798 aa9.25□□□□□ -0.93
CSMD2-208ENST00000471438 PLCG2P16885 1265 aa9.24□□□□□ -0.93
CSMD2-208ENST00000471438 MIER1Q8N108 512 aa9.24□□□□□ -0.93
CSMD2-208ENST00000471438 TMEM121BQ9BXQ6 578 aaPredicted RBP9.24□□□□□ -0.93
CSMD2-208ENST00000471438 PROM2Q8N271 834 aa9.22□□□□□ -0.93
CSMD2-208ENST00000471438 SNPHO15079 494 aa9.2□□□□□ -0.94
CSMD2-208ENST00000471438 TMEM106CQ9BVX2 250 aa9.18□□□□□ -0.94
CSMD2-208ENST00000471438 MARVELD3Q96A59 401 aa9.17□□□□□ -0.94
CSMD2-208ENST00000471438 IFNL1Q8IU54 200 aa9.16□□□□□ -0.94
CSMD2-208ENST00000471438 IRX5P78411 483 aaPredicted RBP9.15□□□□□ -0.94
CSMD2-208ENST00000471438 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.14□□□□□ -0.95
CSMD2-208ENST00000471438 OCEL1Q9H607 264 aa9.11□□□□□ -0.95
CSMD2-208ENST00000471438 PLCD3Q8N3E9 789 aa9.1□□□□□ -0.95
CSMD2-208ENST00000471438 EMP3P54852 163 aa9.08□□□□□ -0.96
CSMD2-208ENST00000471438 ZBTB47Q9UFB7 747 aaPredicted RBP9.07□□□□□ -0.96
CSMD2-208ENST00000471438 NUBP1P53384 320 aa9.06□□□□□ -0.96
CSMD2-208ENST00000471438 FAM212AQ96EL1 285 aa9.05□□□□□ -0.96
CSMD2-208ENST00000471438 HS3ST6Q96QI5 342 aa9.02□□□□□ -0.97
CSMD2-208ENST00000471438 KRTAP3-3Q9BYR6 98 aa9.02□□□□□ -0.97
CSMD2-208ENST00000471438 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.97
CSMD2-208ENST00000471438 FAM205CA6NFA0 338 aa9.01□□□□□ -0.97
CSMD2-208ENST00000471438 C3orf67Q6ZVT6 689 aa9□□□□□ -0.97
CSMD2-208ENST00000471438 EHMT2Q96KQ7 1210 aa9□□□□□ -0.97
CSMD2-208ENST00000471438 POTEB3A0JP26 581 aa8.98□□□□□ -0.97
CSMD2-208ENST00000471438 POTEBQ6S5H4 581 aa8.98□□□□□ -0.97
CSMD2-208ENST00000471438 L3MBTL3Q96JM7 780 aaPredicted RBP8.95□□□□□ -0.98
CSMD2-208ENST00000471438 PYGBP11216 843 aa8.94□□□□□ -0.98
CSMD2-208ENST00000471438 DCAF8Q5TAQ9 597 aa8.92□□□□□ -0.98
CSMD2-208ENST00000471438 PDCD7Q8N8D1 485 aaKnown RBP8.92□□□□□ -0.98
CSMD2-208ENST00000471438 PCDHB8Q9UN66 801 aa8.92□□□□□ -0.98
CSMD2-208ENST00000471438 GOLGA2Q08379 1002 aa8.91□□□□□ -0.98
CSMD2-208ENST00000471438 MKRN3Q13064 507 aaKnown RBP8.89□□□□□ -0.99
CSMD2-208ENST00000471438 RNF166Q96A37 237 aaPredicted RBP8.86□□□□□ -0.99
CSMD2-208ENST00000471438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.84□□□□□ -0.99
CSMD2-208ENST00000471438 ERBB3P21860 1342 aa8.8□□□□□ -1
CSMD2-208ENST00000471438 ZNF467Q7Z7K2 595 aaPredicted RBP8.8□□□□□ -1
CSMD2-208ENST00000471438 ZNF710Q8N1W2 664 aa8.8□□□□□ -1
CSMD2-208ENST00000471438 HOXB3P14651 431 aaPredicted RBP8.78□□□□□ -1
CSMD2-208ENST00000471438 HOXB1P14653 301 aaPredicted RBP8.78□□□□□ -1
CSMD2-208ENST00000471438 MYT1LQ9UL68 1186 aa8.78□□□□□ -1
CSMD2-208ENST00000471438 G3V3G9 751 aa8.77□□□□□ -1.01
CSMD2-208ENST00000471438 DOK7Q18PE1 504 aa8.74□□□□□ -1.01
CSMD2-208ENST00000471438 PSEN1P49768 467 aa8.73□□□□□ -1.01
CSMD2-208ENST00000471438 DPY19L2Q6NUT2 758 aa8.73□□□□□ -1.01
CSMD2-208ENST00000471438 BOLA1Q9Y3E2 137 aa8.72□□□□□ -1.01
CSMD2-208ENST00000471438 GSE1Q14687 1217 aa8.71□□□□□ -1.02
CSMD2-208ENST00000471438 VARS2Q5ST30 1063 aaKnown RBP8.71□□□□□ -1.02
CSMD2-208ENST00000471438 ILDR1Q86SU0 546 aaPredicted RBP8.71□□□□□ -1.02
CSMD2-208ENST00000471438 RIMBP2O15034 1052 aa8.7□□□□□ -1.02
CSMD2-208ENST00000471438 PTGER2P43116 358 aa8.67□□□□□ -1.02
CSMD2-208ENST00000471438 CHRM1P11229 460 aaPredicted RBP8.66□□□□□ -1.02
CSMD2-208ENST00000471438 ZNF687Q8N1G0 1237 aa8.66□□□□□ -1.02
CSMD2-208ENST00000471438 PDAP1Q13442 181 aaKnown RBP8.64□□□□□ -1.03
CSMD2-208ENST00000471438 CABP2Q9NPB3 220 aa8.64□□□□□ -1.03
CSMD2-208ENST00000471438 KLHL34Q8N239 644 aa8.62□□□□□ -1.03
CSMD2-208ENST00000471438 ZSWIM6Q9HCJ5 1215 aa8.6□□□□□ -1.03
CSMD2-208ENST00000471438 FKBP8Q14318 412 aa8.58□□□□□ -1.04
CSMD2-208ENST00000471438 ANKRD13DQ6ZTN6 518 aa8.58□□□□□ -1.04
CSMD2-208ENST00000471438 FBXO3Q9UK99 471 aa8.57□□□□□ -1.04
CSMD2-208ENST00000471438 GPR153Q6NV75 609 aa8.54□□□□□ -1.04
CSMD2-208ENST00000471438 PLA2G2EQ9NZK7 142 aa8.53□□□□□ -1.04
CSMD2-208ENST00000471438 TMEM92Q6UXU6 159 aa8.5□□□□□ -1.05
CSMD2-208ENST00000471438 LSM11P83369 360 aaKnown RBP eCLIP8.49□□□□□ -1.05
CSMD2-208ENST00000471438 ARSIQ5FYB1 569 aa8.48□□□□□ -1.05
CSMD2-208ENST00000471438 MICALL2Q8IY33 904 aa8.48□□□□□ -1.05
CSMD2-208ENST00000471438 EFCAB3Q8N7B9 438 aa8.47□□□□□ -1.05
CSMD2-208ENST00000471438 ZNF316A6NFI3 1004 aaPredicted RBP8.46□□□□□ -1.06
CSMD2-208ENST00000471438 VASPP50552 380 aaPredicted RBP8.46□□□□□ -1.06
CSMD2-208ENST00000471438 HCSTQ9UBK5 93 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms