RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 TPRNQ4KMQ1 711 aa14.38□□□□□ -0.11
SMC5-202ENST00000471372 SPRYD3Q8NCJ5 442 aa14.37□□□□□ -0.11
SMC5-202ENST00000471372 TSHZ2Q9NRE2 1034 aa14.36□□□□□ -0.11
SMC5-202ENST00000471372 CIZ1Q9ULV3 898 aaPredicted RBP14.31□□□□□ -0.12
SMC5-202ENST00000471372 CHGAP10645 457 aaKnown RBP14.3□□□□□ -0.12
SMC5-202ENST00000471372 PRKAR2AP13861 404 aaKnown RBP14.3□□□□□ -0.12
SMC5-202ENST00000471372 ZBTB47Q9UFB7 747 aaPredicted RBP14.18□□□□□ -0.14
SMC5-202ENST00000471372 PRR29P0C7W0 189 aa14.17□□□□□ -0.14
SMC5-202ENST00000471372 EVX2Q03828 476 aa14.17□□□□□ -0.14
SMC5-202ENST00000471372 PLEKHG5O94827 1062 aa14.16□□□□□ -0.14
SMC5-202ENST00000471372 CHADLQ6NUI6 762 aa14.12□□□□□ -0.15
SMC5-202ENST00000471372 HS6ST3Q8IZP7 471 aa14.12□□□□□ -0.15
SMC5-202ENST00000471372 TRIM41Q8WV44 630 aa14.11□□□□□ -0.15
SMC5-202ENST00000471372 DNAJC5Q9H3Z4 198 aa14.11□□□□□ -0.15
SMC5-202ENST00000471372 RNF25Q96BH1 459 aaPredicted RBP14.09□□□□□ -0.15
SMC5-202ENST00000471372 C19orf67A6NJJ6 358 aa14.07□□□□□ -0.16
SMC5-202ENST00000471372 NBR1Q14596 966 aa14.03□□□□□ -0.16
SMC5-202ENST00000471372 GSE1Q14687 1217 aa14□□□□□ -0.17
SMC5-202ENST00000471372 NKX1-1Q15270 411 aaPredicted RBP13.99□□□□□ -0.17
SMC5-202ENST00000471372 NUBP1P53384 320 aa13.97□□□□□ -0.17
SMC5-202ENST00000471372 RIOK3O14730 519 aaKnown RBP13.92□□□□□ -0.18
SMC5-202ENST00000471372 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
SMC5-202ENST00000471372 FARP1Q9Y4F1 1045 aaPredicted RBP13.91□□□□□ -0.18
SMC5-202ENST00000471372 GTPBP6O43824 516 aaPredicted RBP13.9□□□□□ -0.18
SMC5-202ENST00000471372 GABBR2O75899 941 aa13.87□□□□□ -0.19
SMC5-202ENST00000471372 CD44P16070 742 aaKnown RBP13.85□□□□□ -0.19
SMC5-202ENST00000471372 STK25O00506 426 aa13.84□□□□□ -0.19
SMC5-202ENST00000471372 VGFO15240 615 aaPredicted RBP13.79□□□□□ -0.2
SMC5-202ENST00000471372 FAM212AQ96EL1 285 aa13.78□□□□□ -0.2
SMC5-202ENST00000471372 CREBZFQ9NS37 354 aa13.78□□□□□ -0.2
SMC5-202ENST00000471372 MNX1P50219 401 aaPredicted RBP13.76□□□□□ -0.21
SMC5-202ENST00000471372 CHRM1P11229 460 aaPredicted RBP13.72□□□□□ -0.21
SMC5-202ENST00000471372 RASEFQ8IZ41 740 aa13.71□□□□□ -0.21
SMC5-202ENST00000471372 BCL11BQ9C0K0 894 aaPredicted RBP13.71□□□□□ -0.21
SMC5-202ENST00000471372 STK24Q9Y6E0 443 aa13.71□□□□□ -0.21
SMC5-202ENST00000471372 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.7□□□□□ -0.22
SMC5-202ENST00000471372 ZFP91Q96JP5 570 aaPredicted RBP13.7□□□□□ -0.22
SMC5-202ENST00000471372 SGIP1Q9BQI5 828 aa13.69□□□□□ -0.22
SMC5-202ENST00000471372 CLCN6P51797 869 aa13.65□□□□□ -0.22
SMC5-202ENST00000471372 ZRANB1Q9UGI0 708 aa13.65□□□□□ -0.22
SMC5-202ENST00000471372 TIMELESSQ9UNS1 1208 aa13.65□□□□□ -0.22
SMC5-202ENST00000471372 PYGBP11216 843 aa13.64□□□□□ -0.23
SMC5-202ENST00000471372 ZNF579Q8NAF0 562 aaKnown RBP13.62□□□□□ -0.23
SMC5-202ENST00000471372 TULP1O00294 542 aaPredicted RBP13.61□□□□□ -0.23
SMC5-202ENST00000471372 RYDENQ9NUL5 291 aaKnown RBP13.61□□□□□ -0.23
SMC5-202ENST00000471372 GTF3C3Q9Y5Q9 886 aa13.58□□□□□ -0.24
SMC5-202ENST00000471372 PAK3O75914 559 aaPredicted RBP13.56□□□□□ -0.24
SMC5-202ENST00000471372 POTEIP0CG38 1075 aa13.55□□□□□ -0.24
SMC5-202ENST00000471372 LHX8Q68G74 356 aa13.55□□□□□ -0.24
SMC5-202ENST00000471372 DCBLD2Q96PD2 775 aa13.53□□□□□ -0.24
SMC5-202ENST00000471372 P3H3Q8IVL6 736 aa13.52□□□□□ -0.25
SMC5-202ENST00000471372 CADPS2Q86UW7 1296 aa13.51□□□□□ -0.25
SMC5-202ENST00000471372 KCNV2Q8TDN2 545 aa13.48□□□□□ -0.25
SMC5-202ENST00000471372 GALR2O43603 387 aaPredicted RBP13.46□□□□□ -0.25
SMC5-202ENST00000471372 PHF12Q96QT6 1004 aa13.46□□□□□ -0.25
SMC5-202ENST00000471372 TMEM132AQ24JP5 1023 aa13.45□□□□□ -0.26
SMC5-202ENST00000471372 WDR70Q9NW82 654 aa13.43□□□□□ -0.26
SMC5-202ENST00000471372 LMOD2Q6P5Q4 547 aa13.41□□□□□ -0.26
SMC5-202ENST00000471372 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMC5-202ENST00000471372 ZNF467Q7Z7K2 595 aaPredicted RBP13.39□□□□□ -0.27
SMC5-202ENST00000471372 TSPYL2Q9H2G4 693 aaPredicted RBP13.38□□□□□ -0.27
SMC5-202ENST00000471372 PDAP1Q13442 181 aaKnown RBP13.35□□□□□ -0.27
SMC5-202ENST00000471372 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
SMC5-202ENST00000471372 PCDHB13Q9Y5F0 798 aa13.34□□□□□ -0.27
SMC5-202ENST00000471372 MFRPQ9BY79 579 aa13.33□□□□□ -0.28
SMC5-202ENST00000471372 ERICH6Q7L0X2 663 aa13.29□□□□□ -0.28
SMC5-202ENST00000471372 PSEN1P49768 467 aa13.27□□□□□ -0.29
SMC5-202ENST00000471372 MS4A3Q96HJ5 214 aa13.27□□□□□ -0.29
SMC5-202ENST00000471372 PPP1R37O75864 691 aa13.25□□□□□ -0.29
SMC5-202ENST00000471372 BRPF1P55201 1214 aaPredicted RBP13.23□□□□□ -0.29
SMC5-202ENST00000471372 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
SMC5-202ENST00000471372 CCDC61Q9Y6R9 512 aa13.22□□□□□ -0.29
SMC5-202ENST00000471372 C14orf37Q86TY3 774 aa13.2□□□□□ -0.3
SMC5-202ENST00000471372 ZC3H15Q8WU90 426 aaKnown RBP13.19□□□□□ -0.3
SMC5-202ENST00000471372 E2F4Q16254 413 aa13.18□□□□□ -0.3
SMC5-202ENST00000471372 PELP1Q8IZL8 1130 aaKnown RBP13.18□□□□□ -0.3
SMC5-202ENST00000471372 SEMA3EO15041 775 aa13.17□□□□□ -0.3
SMC5-202ENST00000471372 FBXO22Q8NEZ5 403 aa13.17□□□□□ -0.3
SMC5-202ENST00000471372 ASTLQ6HA08 431 aaPredicted RBP13.16□□□□□ -0.3
SMC5-202ENST00000471372 EFCAB3Q8N7B9 438 aa13.16□□□□□ -0.3
SMC5-202ENST00000471372 KIF12Q96FN5 646 aa13.15□□□□□ -0.3
SMC5-202ENST00000471372 ARXQ96QS3 562 aa13.15□□□□□ -0.3
SMC5-202ENST00000471372 ATMINO43313 823 aaPredicted RBP13.14□□□□□ -0.31
SMC5-202ENST00000471372 TESPA1A2RU30 521 aaPredicted RBP13.13□□□□□ -0.31
SMC5-202ENST00000471372 IFNL1Q8IU54 200 aa13.13□□□□□ -0.31
SMC5-202ENST00000471372 PHF8Q9UPP1 1060 aa13.13□□□□□ -0.31
SMC5-202ENST00000471372 NLRP6P59044 892 aa13.12□□□□□ -0.31
SMC5-202ENST00000471372 POTEB2H3BUK9 544 aa13.11□□□□□ -0.31
SMC5-202ENST00000471372 SLC24A3Q9HC58 644 aa13.11□□□□□ -0.31
SMC5-202ENST00000471372 CABP2Q9NPB3 220 aa13.11□□□□□ -0.31
SMC5-202ENST00000471372 NEUROD2Q15784 382 aa13.1□□□□□ -0.31
SMC5-202ENST00000471372 METRNQ9UJH8 293 aa13.1□□□□□ -0.31
SMC5-202ENST00000471372 SLC39A7Q92504 469 aa13.09□□□□□ -0.31
SMC5-202ENST00000471372 SOX12O15370 315 aa13.08□□□□□ -0.32
SMC5-202ENST00000471372 MAP3K13O43283 966 aa13.08□□□□□ -0.32
SMC5-202ENST00000471372 OTUD5Q96G74 571 aa13.08□□□□□ -0.32
SMC5-202ENST00000471372 C7P10643 843 aa13.07□□□□□ -0.32
SMC5-202ENST00000471372 NCKAP5LQ9HCH0 1330 aa13.07□□□□□ -0.32
SMC5-202ENST00000471372 ATN1P54259 1190 aaPredicted RBP13.04□□□□□ -0.32
SMC5-202ENST00000471372 LARP6Q9BRS8 491 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms