RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 KIF12Q96FN5 646 aa7.55□□□□□ -1.2
COMMD3-209ENST00000471350 TSPYL2Q9H2G4 693 aaPredicted RBP7.55□□□□□ -1.2
COMMD3-209ENST00000471350 ATMINO43313 823 aaPredicted RBP7.53□□□□□ -1.2
COMMD3-209ENST00000471350 MIER1Q8N108 512 aa7.53□□□□□ -1.2
COMMD3-209ENST00000471350 TRPC6Q9Y210 931 aa7.52□□□□□ -1.21
COMMD3-209ENST00000471350 NUBP1P53384 320 aa7.51□□□□□ -1.21
COMMD3-209ENST00000471350 OTUD5Q96G74 571 aa7.51□□□□□ -1.21
COMMD3-209ENST00000471350 POTEJP0CG39 1038 aa7.5□□□□□ -1.21
COMMD3-209ENST00000471350 MAP3K13O43283 966 aa7.49□□□□□ -1.21
COMMD3-209ENST00000471350 POTEFA5A3E0 1075 aa7.47□□□□□ -1.21
COMMD3-209ENST00000471350 ATN1P54259 1190 aaPredicted RBP7.47□□□□□ -1.21
COMMD3-209ENST00000471350 BMP2KQ9NSY1 1161 aaPredicted RBP7.47□□□□□ -1.21
COMMD3-209ENST00000471350 PLCD3Q8N3E9 789 aa7.45□□□□□ -1.22
COMMD3-209ENST00000471350 METRNQ9UJH8 293 aa7.45□□□□□ -1.22
COMMD3-209ENST00000471350 PLEKHG5O94827 1062 aa7.41□□□□□ -1.22
COMMD3-209ENST00000471350 C7P10643 843 aa7.41□□□□□ -1.22
COMMD3-209ENST00000471350 TIE1P35590 1138 aa7.41□□□□□ -1.22
COMMD3-209ENST00000471350 SLC39A7Q92504 469 aa7.41□□□□□ -1.22
COMMD3-209ENST00000471350 TTLL13PA6NNM8 815 aa7.4□□□□□ -1.22
COMMD3-209ENST00000471350 SGIP1Q9BQI5 828 aa7.39□□□□□ -1.23
COMMD3-209ENST00000471350 IFNL1Q8IU54 200 aa7.38□□□□□ -1.23
COMMD3-209ENST00000471350 PLSCR2Q9NRY7 297 aa7.38□□□□□ -1.23
COMMD3-209ENST00000471350 ZBTB47Q9UFB7 747 aaPredicted RBP7.37□□□□□ -1.23
COMMD3-209ENST00000471350 COLQQ9Y215 455 aaPredicted RBP7.36□□□□□ -1.23
COMMD3-209ENST00000471350 PCDHB13Q9Y5F0 798 aa7.35□□□□□ -1.23
COMMD3-209ENST00000471350 LCE2DQ5TA82 110 aaPredicted RBP7.34□□□□□ -1.23
COMMD3-209ENST00000471350 VASPP50552 380 aaPredicted RBP7.33□□□□□ -1.24
COMMD3-209ENST00000471350 FAM212AQ96EL1 285 aa7.33□□□□□ -1.24
COMMD3-209ENST00000471350 FBXO3Q9UK99 471 aa7.33□□□□□ -1.24
COMMD3-209ENST00000471350 TRIM35Q9UPQ4 493 aa7.32□□□□□ -1.24
COMMD3-209ENST00000471350 PYGBP11216 843 aa7.29□□□□□ -1.24
COMMD3-209ENST00000471350 IER5LQ5T953 404 aa7.28□□□□□ -1.24
COMMD3-209ENST00000471350 DCAF8Q5TAQ9 597 aa7.27□□□□□ -1.25
COMMD3-209ENST00000471350 TMEM106CQ9BVX2 250 aa7.27□□□□□ -1.25
COMMD3-209ENST00000471350 IRX5P78411 483 aaPredicted RBP7.26□□□□□ -1.25
COMMD3-209ENST00000471350 MAMSTRQ6ZN01 415 aa7.26□□□□□ -1.25
COMMD3-209ENST00000471350 IFNLR1Q8IU57 520 aaPredicted RBP7.26□□□□□ -1.25
COMMD3-209ENST00000471350 PCDHB8Q9UN66 801 aa7.26□□□□□ -1.25
COMMD3-209ENST00000471350 POTEMA6NI47 508 aa7.23□□□□□ -1.25
COMMD3-209ENST00000471350 CHRM1P11229 460 aaPredicted RBP7.22□□□□□ -1.25
COMMD3-209ENST00000471350 POTEGQ6S5H5 508 aa7.22□□□□□ -1.25
COMMD3-209ENST00000471350 SEC24BO95487 1268 aa7.2□□□□□ -1.26
COMMD3-209ENST00000471350 SCUBE2Q9NQ36 999 aa7.2□□□□□ -1.26
COMMD3-209ENST00000471350 GSE1Q14687 1217 aa7.19□□□□□ -1.26
COMMD3-209ENST00000471350 KLHL34Q8N239 644 aa7.18□□□□□ -1.26
COMMD3-209ENST00000471350 PDCD7Q8N8D1 485 aaKnown RBP7.18□□□□□ -1.26
COMMD3-209ENST00000471350 ILDR1Q86SU0 546 aaPredicted RBP7.16□□□□□ -1.26
COMMD3-209ENST00000471350 ZNF467Q7Z7K2 595 aaPredicted RBP7.15□□□□□ -1.26
COMMD3-209ENST00000471350 OCEL1Q9H607 264 aa7.15□□□□□ -1.26
COMMD3-209ENST00000471350 PLCG2P16885 1265 aa7.14□□□□□ -1.27
COMMD3-209ENST00000471350 SPOCK2Q92563 424 aa7.14□□□□□ -1.27
COMMD3-209ENST00000471350 FAM163AQ96GL9 167 aaPredicted RBP7.14□□□□□ -1.27
COMMD3-209ENST00000471350 PSEN1P49768 467 aa7.12□□□□□ -1.27
COMMD3-209ENST00000471350 SLAIN1Q8ND83 568 aa7.11□□□□□ -1.27
COMMD3-209ENST00000471350 ST18O60284 1047 aa7.08□□□□□ -1.28
COMMD3-209ENST00000471350 PDAP1Q13442 181 aaKnown RBP7.07□□□□□ -1.28
COMMD3-209ENST00000471350 PCDH10Q9P2E7 1040 aa7.07□□□□□ -1.28
COMMD3-209ENST00000471350 DPY19L2Q6NUT2 758 aa7.06□□□□□ -1.28
COMMD3-209ENST00000471350 CIZ1Q9ULV3 898 aaPredicted RBP7.06□□□□□ -1.28
COMMD3-209ENST00000471350 RNF25Q96BH1 459 aaPredicted RBP7.05□□□□□ -1.28
COMMD3-209ENST00000471350 MKRN3Q13064 507 aaKnown RBP7.03□□□□□ -1.28
COMMD3-209ENST00000471350 CABP2Q9NPB3 220 aa7.03□□□□□ -1.28
COMMD3-209ENST00000471350 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.03□□□□□ -1.28
COMMD3-209ENST00000471350 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.01□□□□□ -1.29
COMMD3-209ENST00000471350 CDAN1Q8IWY9 1227 aa6.99□□□□□ -1.29
COMMD3-209ENST00000471350 L3MBTL3Q96JM7 780 aaPredicted RBP6.99□□□□□ -1.29
COMMD3-209ENST00000471350 TMEM121BQ9BXQ6 578 aaPredicted RBP6.99□□□□□ -1.29
COMMD3-209ENST00000471350 GOLGA2Q08379 1002 aa6.98□□□□□ -1.29
COMMD3-209ENST00000471350 TRIM41Q8WV44 630 aa6.98□□□□□ -1.29
COMMD3-209ENST00000471350 EFCAB3Q8N7B9 438 aa6.97□□□□□ -1.29
COMMD3-209ENST00000471350 POTEB3A0JP26 581 aa6.95□□□□□ -1.3
COMMD3-209ENST00000471350 POTEBQ6S5H4 581 aa6.95□□□□□ -1.3
COMMD3-209ENST00000471350 MS4A4AQ96JQ5 239 aa6.95□□□□□ -1.3
COMMD3-209ENST00000471350 BOLA1Q9Y3E2 137 aa6.95□□□□□ -1.3
COMMD3-209ENST00000471350 HOXB3P14651 431 aaPredicted RBP6.94□□□□□ -1.3
COMMD3-209ENST00000471350 C3orf67Q6ZVT6 689 aa6.94□□□□□ -1.3
COMMD3-209ENST00000471350 MARVELD3Q96A59 401 aa6.94□□□□□ -1.3
COMMD3-209ENST00000471350 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.93□□□□□ -1.3
COMMD3-209ENST00000471350 RIOK3O14730 519 aaKnown RBP6.93□□□□□ -1.3
COMMD3-209ENST00000471350 SNPHO15079 494 aa6.93□□□□□ -1.3
COMMD3-209ENST00000471350 TMEM92Q6UXU6 159 aa6.93□□□□□ -1.3
COMMD3-209ENST00000471350 ZFP91Q96JP5 570 aaPredicted RBP6.93□□□□□ -1.3
COMMD3-209ENST00000471350 VGFO15240 615 aaPredicted RBP6.89□□□□□ -1.31
COMMD3-209ENST00000471350 MICALL2Q8IY33 904 aa6.88□□□□□ -1.31
COMMD3-209ENST00000471350 KRTAP3-3Q9BYR6 98 aa6.88□□□□□ -1.31
COMMD3-209ENST00000471350 KRTAP3-2Q9BYR7 98 aa6.88□□□□□ -1.31
COMMD3-209ENST00000471350 PHF8Q9UPP1 1060 aa6.88□□□□□ -1.31
COMMD3-209ENST00000471350 SOX12O15370 315 aa6.87□□□□□ -1.31
COMMD3-209ENST00000471350 PKD2Q13563 968 aa6.87□□□□□ -1.31
COMMD3-209ENST00000471350 FBXO22Q8NEZ5 403 aa6.87□□□□□ -1.31
COMMD3-209ENST00000471350 SPNS2Q8IVW8 549 aa6.86□□□□□ -1.31
COMMD3-209ENST00000471350 HS3ST6Q96QI5 342 aa6.85□□□□□ -1.31
COMMD3-209ENST00000471350 EMP3P54852 163 aa6.84□□□□□ -1.31
COMMD3-209ENST00000471350 HOXB1P14653 301 aaPredicted RBP6.83□□□□□ -1.32
COMMD3-209ENST00000471350 MFRPQ9BY79 579 aa6.83□□□□□ -1.32
COMMD3-209ENST00000471350 BCL11BQ9C0K0 894 aaPredicted RBP6.83□□□□□ -1.32
COMMD3-209ENST00000471350 RGL2O15211 777 aa6.82□□□□□ -1.32
COMMD3-209ENST00000471350 MMRN1Q13201 1228 aa6.82□□□□□ -1.32
COMMD3-209ENST00000471350 FAM205CA6NFA0 338 aa6.81□□□□□ -1.32
COMMD3-209ENST00000471350 G3V3G9 751 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms