RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 SLC39A7Q92504 469 aa13.44□□□□□ -0.26
SOX2-OT-204ENST00000469278 ATMINO43313 823 aaPredicted RBP13.42□□□□□ -0.26
SOX2-OT-204ENST00000469278 C7P10643 843 aa13.41□□□□□ -0.26
SOX2-OT-204ENST00000469278 POTEMA6NI47 508 aa13.39□□□□□ -0.27
SOX2-OT-204ENST00000469278 PROM2Q8N271 834 aa13.37□□□□□ -0.27
SOX2-OT-204ENST00000469278 PLEKHG5O94827 1062 aa13.36□□□□□ -0.27
SOX2-OT-204ENST00000469278 CCDC61Q9Y6R9 512 aa13.35□□□□□ -0.27
SOX2-OT-204ENST00000469278 POTEGQ6S5H5 508 aa13.34□□□□□ -0.27
SOX2-OT-204ENST00000469278 MAMSTRQ6ZN01 415 aa13.34□□□□□ -0.27
SOX2-OT-204ENST00000469278 ATN1P54259 1190 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-204ENST00000469278 KIF12Q96FN5 646 aa13.29□□□□□ -0.28
SOX2-OT-204ENST00000469278 POTEJP0CG39 1038 aa13.27□□□□□ -0.29
SOX2-OT-204ENST00000469278 MIER1Q8N108 512 aa13.27□□□□□ -0.29
SOX2-OT-204ENST00000469278 SCUBE2Q9NQ36 999 aa13.26□□□□□ -0.29
SOX2-OT-204ENST00000469278 BMP2KQ9NSY1 1161 aaPredicted RBP13.23□□□□□ -0.29
SOX2-OT-204ENST00000469278 MAP3K13O43283 966 aa13.2□□□□□ -0.3
SOX2-OT-204ENST00000469278 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
SOX2-OT-204ENST00000469278 TIE1P35590 1138 aa13.18□□□□□ -0.3
SOX2-OT-204ENST00000469278 PCDH10Q9P2E7 1040 aa13.18□□□□□ -0.3
SOX2-OT-204ENST00000469278 TRPC6Q9Y210 931 aa13.18□□□□□ -0.3
SOX2-OT-204ENST00000469278 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
SOX2-OT-204ENST00000469278 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
SOX2-OT-204ENST00000469278 SEC24BO95487 1268 aa13.12□□□□□ -0.31
SOX2-OT-204ENST00000469278 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
SOX2-OT-204ENST00000469278 TTLL13PA6NNM8 815 aa13.1□□□□□ -0.31
SOX2-OT-204ENST00000469278 ZBTB47Q9UFB7 747 aaPredicted RBP13.08□□□□□ -0.32
SOX2-OT-204ENST00000469278 LCE2DQ5TA82 110 aaPredicted RBP13.07□□□□□ -0.32
SOX2-OT-204ENST00000469278 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
SOX2-OT-204ENST00000469278 SGIP1Q9BQI5 828 aa13.04□□□□□ -0.32
SOX2-OT-204ENST00000469278 TRIM35Q9UPQ4 493 aa13.04□□□□□ -0.32
SOX2-OT-204ENST00000469278 COLQQ9Y215 455 aaPredicted RBP13.04□□□□□ -0.32
SOX2-OT-204ENST00000469278 IER5LQ5T953 404 aa13.02□□□□□ -0.33
SOX2-OT-204ENST00000469278 FAM212AQ96EL1 285 aa12.98□□□□□ -0.33
SOX2-OT-204ENST00000469278 NUBP1P53384 320 aa12.97□□□□□ -0.33
SOX2-OT-204ENST00000469278 IFNL1Q8IU54 200 aa12.95□□□□□ -0.34
SOX2-OT-204ENST00000469278 TMEM106CQ9BVX2 250 aa12.93□□□□□ -0.34
SOX2-OT-204ENST00000469278 PLCG2P16885 1265 aa12.9□□□□□ -0.34
SOX2-OT-204ENST00000469278 SLAIN1Q8ND83 568 aa12.9□□□□□ -0.34
SOX2-OT-204ENST00000469278 CDAN1Q8IWY9 1227 aa12.85□□□□□ -0.35
SOX2-OT-204ENST00000469278 FKBP8Q14318 412 aa12.83□□□□□ -0.36
SOX2-OT-204ENST00000469278 DCAF8Q5TAQ9 597 aa12.81□□□□□ -0.36
SOX2-OT-204ENST00000469278 ST18O60284 1047 aa12.79□□□□□ -0.36
SOX2-OT-204ENST00000469278 IRX5P78411 483 aaPredicted RBP12.79□□□□□ -0.36
SOX2-OT-204ENST00000469278 PYGBP11216 843 aa12.78□□□□□ -0.36
SOX2-OT-204ENST00000469278 OCEL1Q9H607 264 aa12.76□□□□□ -0.37
SOX2-OT-204ENST00000469278 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.7□□□□□ -0.38
SOX2-OT-204ENST00000469278 FBXO3Q9UK99 471 aa12.7□□□□□ -0.38
SOX2-OT-204ENST00000469278 PCDHB8Q9UN66 801 aa12.7□□□□□ -0.38
SOX2-OT-204ENST00000469278 SNPHO15079 494 aa12.68□□□□□ -0.38
SOX2-OT-204ENST00000469278 TMEM121BQ9BXQ6 578 aaPredicted RBP12.67□□□□□ -0.38
SOX2-OT-204ENST00000469278 GOLGA2Q08379 1002 aa12.63□□□□□ -0.39
SOX2-OT-204ENST00000469278 KLHL34Q8N239 644 aa12.62□□□□□ -0.39
SOX2-OT-204ENST00000469278 ZNF467Q7Z7K2 595 aaPredicted RBP12.61□□□□□ -0.39
SOX2-OT-204ENST00000469278 GSE1Q14687 1217 aa12.6□□□□□ -0.39
SOX2-OT-204ENST00000469278 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
SOX2-OT-204ENST00000469278 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
SOX2-OT-204ENST00000469278 MARVELD3Q96A59 401 aa12.57□□□□□ -0.4
SOX2-OT-204ENST00000469278 PDCD7Q8N8D1 485 aaKnown RBP12.55□□□□□ -0.4
SOX2-OT-204ENST00000469278 L3MBTL3Q96JM7 780 aaPredicted RBP12.55□□□□□ -0.4
SOX2-OT-204ENST00000469278 VASPP50552 380 aaPredicted RBP12.52□□□□□ -0.41
SOX2-OT-204ENST00000469278 MMRN1Q13201 1228 aa12.52□□□□□ -0.41
SOX2-OT-204ENST00000469278 SPNS2Q8IVW8 549 aa12.52□□□□□ -0.41
SOX2-OT-204ENST00000469278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.51□□□□□ -0.41
SOX2-OT-204ENST00000469278 PSEN1P49768 467 aa12.49□□□□□ -0.41
SOX2-OT-204ENST00000469278 EMP3P54852 163 aa12.49□□□□□ -0.41
SOX2-OT-204ENST00000469278 CHRM1P11229 460 aaPredicted RBP12.47□□□□□ -0.41
SOX2-OT-204ENST00000469278 PDAP1Q13442 181 aaKnown RBP12.41□□□□□ -0.42
SOX2-OT-204ENST00000469278 G3V3G9 751 aa12.4□□□□□ -0.42
SOX2-OT-204ENST00000469278 HS3ST6Q96QI5 342 aa12.38□□□□□ -0.43
SOX2-OT-204ENST00000469278 FAM205CA6NFA0 338 aa12.37□□□□□ -0.43
SOX2-OT-204ENST00000469278 CABP2Q9NPB3 220 aa12.35□□□□□ -0.43
SOX2-OT-204ENST00000469278 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
SOX2-OT-204ENST00000469278 DPY19L2Q6NUT2 758 aa12.33□□□□□ -0.44
SOX2-OT-204ENST00000469278 ILDR1Q86SU0 546 aaPredicted RBP12.33□□□□□ -0.44
SOX2-OT-204ENST00000469278 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
SOX2-OT-204ENST00000469278 BOLA1Q9Y3E2 137 aa12.32□□□□□ -0.44
SOX2-OT-204ENST00000469278 KRTAP3-3Q9BYR6 98 aa12.31□□□□□ -0.44
SOX2-OT-204ENST00000469278 KRTAP3-2Q9BYR7 98 aa12.31□□□□□ -0.44
SOX2-OT-204ENST00000469278 POTEB3A0JP26 581 aa12.3□□□□□ -0.44
SOX2-OT-204ENST00000469278 POTEBQ6S5H4 581 aa12.3□□□□□ -0.44
SOX2-OT-204ENST00000469278 ZNF710Q8N1W2 664 aa12.27□□□□□ -0.45
SOX2-OT-204ENST00000469278 HOXB3P14651 431 aaPredicted RBP12.23□□□□□ -0.45
SOX2-OT-204ENST00000469278 IFNLR1Q8IU57 520 aaPredicted RBP12.23□□□□□ -0.45
SOX2-OT-204ENST00000469278 DOK7Q18PE1 504 aa12.22□□□□□ -0.45
SOX2-OT-204ENST00000469278 HOXB1P14653 301 aaPredicted RBP12.19□□□□□ -0.46
SOX2-OT-204ENST00000469278 ERBB3P21860 1342 aa12.18□□□□□ -0.46
SOX2-OT-204ENST00000469278 RIMBP2O15034 1052 aa12.18□□□□□ -0.46
SOX2-OT-204ENST00000469278 EFCAB3Q8N7B9 438 aa12.14□□□□□ -0.47
SOX2-OT-204ENST00000469278 TRIM41Q8WV44 630 aa12.13□□□□□ -0.47
SOX2-OT-204ENST00000469278 VARS2Q5ST30 1063 aaKnown RBP12.09□□□□□ -0.47
SOX2-OT-204ENST00000469278 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
SOX2-OT-204ENST00000469278 RNF166Q96A37 237 aaPredicted RBP12.07□□□□□ -0.48
SOX2-OT-204ENST00000469278 ZSWIM6Q9HCJ5 1215 aa12.04□□□□□ -0.48
SOX2-OT-204ENST00000469278 TMEM92Q6UXU6 159 aa12.01□□□□□ -0.49
SOX2-OT-204ENST00000469278 SOX12O15370 315 aa12□□□□□ -0.49
SOX2-OT-204ENST00000469278 MYT1LQ9UL68 1186 aa12□□□□□ -0.49
SOX2-OT-204ENST00000469278 RIOK3O14730 519 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-204ENST00000469278 ZNF687Q8N1G0 1237 aa11.98□□□□□ -0.49
SOX2-OT-204ENST00000469278 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.95□□□□□ -0.5
SOX2-OT-204ENST00000469278 GPR153Q6NV75 609 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms