RNA–Protein interactions for RNA: ENST00000469102.1

CMC1-208, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 788 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-208ENST00000469102 PHF12Q96QT6 1004 aa14.07□□□□□ -0.16
CMC1-208ENST00000469102 GABBR2O75899 941 aa14.05□□□□□ -0.16
CMC1-208ENST00000469102 FAM212AQ96EL1 285 aa14.05□□□□□ -0.16
CMC1-208ENST00000469102 DCAF8Q5TAQ9 597 aa14.02□□□□□ -0.17
CMC1-208ENST00000469102 KIF12Q96FN5 646 aa13.97□□□□□ -0.17
CMC1-208ENST00000469102 CLCN6P51797 869 aa13.95□□□□□ -0.18
CMC1-208ENST00000469102 GSE1Q14687 1217 aa13.95□□□□□ -0.18
CMC1-208ENST00000469102 GALR2O43603 387 aaPredicted RBP13.93□□□□□ -0.18
CMC1-208ENST00000469102 MAP3K13O43283 966 aa13.91□□□□□ -0.18
CMC1-208ENST00000469102 CIZ1Q9ULV3 898 aaPredicted RBP13.91□□□□□ -0.18
CMC1-208ENST00000469102 PYGBP11216 843 aa13.9□□□□□ -0.18
CMC1-208ENST00000469102 MS4A3Q96HJ5 214 aa13.9□□□□□ -0.18
CMC1-208ENST00000469102 CHRM1P11229 460 aaPredicted RBP13.83□□□□□ -0.2
CMC1-208ENST00000469102 SGIP1Q9BQI5 828 aa13.82□□□□□ -0.2
CMC1-208ENST00000469102 PCDHB13Q9Y5F0 798 aa13.81□□□□□ -0.2
CMC1-208ENST00000469102 POTEIP0CG38 1075 aa13.8□□□□□ -0.2
CMC1-208ENST00000469102 IFNL1Q8IU54 200 aa13.8□□□□□ -0.2
CMC1-208ENST00000469102 TRPC6Q9Y210 931 aa13.79□□□□□ -0.2
CMC1-208ENST00000469102 PKD2Q13563 968 aa13.77□□□□□ -0.21
CMC1-208ENST00000469102 PCDHB8Q9UN66 801 aa13.74□□□□□ -0.21
CMC1-208ENST00000469102 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
CMC1-208ENST00000469102 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
CMC1-208ENST00000469102 BMP2KQ9NSY1 1161 aaPredicted RBP13.68□□□□□ -0.22
CMC1-208ENST00000469102 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
CMC1-208ENST00000469102 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
CMC1-208ENST00000469102 RNF25Q96BH1 459 aaPredicted RBP13.67□□□□□ -0.22
CMC1-208ENST00000469102 ATMINO43313 823 aaPredicted RBP13.66□□□□□ -0.22
CMC1-208ENST00000469102 TIE1P35590 1138 aa13.66□□□□□ -0.22
CMC1-208ENST00000469102 PELP1Q8IZL8 1130 aaKnown RBP13.65□□□□□ -0.22
CMC1-208ENST00000469102 ECM2O94769 699 aaPredicted RBP13.64□□□□□ -0.23
CMC1-208ENST00000469102 TTLL13PA6NNM8 815 aa13.63□□□□□ -0.23
CMC1-208ENST00000469102 ATN1P54259 1190 aaPredicted RBP13.62□□□□□ -0.23
CMC1-208ENST00000469102 TMEM106CQ9BVX2 250 aa13.59□□□□□ -0.23
CMC1-208ENST00000469102 RIOK3O14730 519 aaKnown RBP13.57□□□□□ -0.24
CMC1-208ENST00000469102 RGL2O15211 777 aa13.57□□□□□ -0.24
CMC1-208ENST00000469102 PSEN1P49768 467 aa13.56□□□□□ -0.24
CMC1-208ENST00000469102 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
CMC1-208ENST00000469102 TRIM35Q9UPQ4 493 aa13.52□□□□□ -0.25
CMC1-208ENST00000469102 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
CMC1-208ENST00000469102 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.46□□□□□ -0.25
CMC1-208ENST00000469102 SLC39A7Q92504 469 aa13.46□□□□□ -0.25
CMC1-208ENST00000469102 ZFP91Q96JP5 570 aaPredicted RBP13.46□□□□□ -0.25
CMC1-208ENST00000469102 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.25
CMC1-208ENST00000469102 C7P10643 843 aa13.45□□□□□ -0.26
CMC1-208ENST00000469102 METRNQ9UJH8 293 aa13.45□□□□□ -0.26
CMC1-208ENST00000469102 AMER1Q5JTC6 1135 aaPredicted RBP13.43□□□□□ -0.26
CMC1-208ENST00000469102 POTEFA5A3E0 1075 aa13.42□□□□□ -0.26
CMC1-208ENST00000469102 IER5LQ5T953 404 aa13.4□□□□□ -0.26
CMC1-208ENST00000469102 CABP2Q9NPB3 220 aa13.39□□□□□ -0.27
CMC1-208ENST00000469102 COLQQ9Y215 455 aaPredicted RBP13.39□□□□□ -0.27
CMC1-208ENST00000469102 POTEB2H3BUK9 544 aa13.37□□□□□ -0.27
CMC1-208ENST00000469102 TAOK2Q9UL54 1235 aa13.37□□□□□ -0.27
CMC1-208ENST00000469102 IRX5P78411 483 aaPredicted RBP13.36□□□□□ -0.27
CMC1-208ENST00000469102 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
CMC1-208ENST00000469102 STK25O00506 426 aa13.33□□□□□ -0.28
CMC1-208ENST00000469102 GOLGA2Q08379 1002 aa13.33□□□□□ -0.28
CMC1-208ENST00000469102 MKRN3Q13064 507 aaKnown RBP13.32□□□□□ -0.28
CMC1-208ENST00000469102 LHX8Q68G74 356 aa13.32□□□□□ -0.28
CMC1-208ENST00000469102 EFCAB3Q8N7B9 438 aa13.32□□□□□ -0.28
CMC1-208ENST00000469102 STK24Q9Y6E0 443 aa13.31□□□□□ -0.28
CMC1-208ENST00000469102 SEC24BO95487 1268 aa13.3□□□□□ -0.28
CMC1-208ENST00000469102 POTEJP0CG39 1038 aa13.29□□□□□ -0.28
CMC1-208ENST00000469102 ILDR1Q86SU0 546 aaPredicted RBP13.29□□□□□ -0.28
CMC1-208ENST00000469102 OCEL1Q9H607 264 aa13.28□□□□□ -0.28
CMC1-208ENST00000469102 PDCD7Q8N8D1 485 aaKnown RBP13.27□□□□□ -0.29
CMC1-208ENST00000469102 PLCG2P16885 1265 aa13.25□□□□□ -0.29
CMC1-208ENST00000469102 HS6ST3Q8IZP7 471 aa13.25□□□□□ -0.29
CMC1-208ENST00000469102 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.25□□□□□ -0.29
CMC1-208ENST00000469102 CHGAP10645 457 aaKnown RBP13.24□□□□□ -0.29
CMC1-208ENST00000469102 SOX12O15370 315 aa13.21□□□□□ -0.29
CMC1-208ENST00000469102 DPY19L2Q6NUT2 758 aa13.19□□□□□ -0.3
CMC1-208ENST00000469102 PHF8Q9UPP1 1060 aa13.19□□□□□ -0.3
CMC1-208ENST00000469102 DCAF8L2P0C7V8 631 aa13.18□□□□□ -0.3
CMC1-208ENST00000469102 MS4A4AQ96JQ5 239 aa13.17□□□□□ -0.3
CMC1-208ENST00000469102 MFRPQ9BY79 579 aa13.17□□□□□ -0.3
CMC1-208ENST00000469102 FBXO22Q8NEZ5 403 aa13.16□□□□□ -0.3
CMC1-208ENST00000469102 OTUD5Q96G74 571 aa13.16□□□□□ -0.3
CMC1-208ENST00000469102 DNAJC5Q9H3Z4 198 aa13.15□□□□□ -0.3
CMC1-208ENST00000469102 NKX1-1Q15270 411 aaPredicted RBP13.13□□□□□ -0.31
CMC1-208ENST00000469102 NLRP6P59044 892 aa13.11□□□□□ -0.31
CMC1-208ENST00000469102 MAMSTRQ6ZN01 415 aa13.07□□□□□ -0.32
CMC1-208ENST00000469102 L3MBTL3Q96JM7 780 aaPredicted RBP13.06□□□□□ -0.32
CMC1-208ENST00000469102 TMEM121BQ9BXQ6 578 aaPredicted RBP13.03□□□□□ -0.32
CMC1-208ENST00000469102 SCUBE2Q9NQ36 999 aa13.03□□□□□ -0.32
CMC1-208ENST00000469102 BOLA1Q9Y3E2 137 aa13.03□□□□□ -0.32
CMC1-208ENST00000469102 PPP1R37O75864 691 aa13□□□□□ -0.33
CMC1-208ENST00000469102 MICALL2Q8IY33 904 aa12.98□□□□□ -0.33
CMC1-208ENST00000469102 GTPBP6O43824 516 aaPredicted RBP12.96□□□□□ -0.33
CMC1-208ENST00000469102 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
CMC1-208ENST00000469102 C3orf67Q6ZVT6 689 aa12.94□□□□□ -0.34
CMC1-208ENST00000469102 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.94□□□□□ -0.34
CMC1-208ENST00000469102 G3V3G9 751 aa12.93□□□□□ -0.34
CMC1-208ENST00000469102 SLAIN1Q8ND83 568 aa12.92□□□□□ -0.34
CMC1-208ENST00000469102 TMEM92Q6UXU6 159 aa12.89□□□□□ -0.35
CMC1-208ENST00000469102 RYDENQ9NUL5 291 aaKnown RBP12.88□□□□□ -0.35
CMC1-208ENST00000469102 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.79□□□□□ -0.36
CMC1-208ENST00000469102 SPRYD3Q8NCJ5 442 aa12.77□□□□□ -0.37
CMC1-208ENST00000469102 KIF3CO14782 793 aa12.76□□□□□ -0.37
CMC1-208ENST00000469102 C2orf72A6NCS6 295 aa12.74□□□□□ -0.37
CMC1-208ENST00000469102 PAXIP1Q6ZW49 1069 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms