RNA–Protein interactions for RNA: ENST00000469077.1

PTPN22-204, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 2

Gene PTPN22, Length 562 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-204ENST00000469077 POTEJP0CG39 1038 aa10.47□□□□□ -0.73
PTPN22-204ENST00000469077 ASTLQ6HA08 431 aaPredicted RBP10.46□□□□□ -0.73
PTPN22-204ENST00000469077 MS4A3Q96HJ5 214 aa10.43□□□□□ -0.74
PTPN22-204ENST00000469077 ATMINO43313 823 aaPredicted RBP10.42□□□□□ -0.74
PTPN22-204ENST00000469077 C7P10643 843 aa10.42□□□□□ -0.74
PTPN22-204ENST00000469077 SLC39A7Q92504 469 aa10.42□□□□□ -0.74
PTPN22-204ENST00000469077 METRNQ9UJH8 293 aa10.41□□□□□ -0.74
PTPN22-204ENST00000469077 PROM2Q8N271 834 aa10.4□□□□□ -0.74
PTPN22-204ENST00000469077 FAM163AQ96GL9 167 aaPredicted RBP10.4□□□□□ -0.74
PTPN22-204ENST00000469077 MAMSTRQ6ZN01 415 aa10.36□□□□□ -0.75
PTPN22-204ENST00000469077 TSPYL2Q9H2G4 693 aaPredicted RBP10.34□□□□□ -0.75
PTPN22-204ENST00000469077 CCDC61Q9Y6R9 512 aa10.33□□□□□ -0.76
PTPN22-204ENST00000469077 ATN1P54259 1190 aaPredicted RBP10.3□□□□□ -0.76
PTPN22-204ENST00000469077 KIF12Q96FN5 646 aa10.29□□□□□ -0.76
PTPN22-204ENST00000469077 SCUBE2Q9NQ36 999 aa10.27□□□□□ -0.77
PTPN22-204ENST00000469077 CDAN1Q8IWY9 1227 aa10.26□□□□□ -0.77
PTPN22-204ENST00000469077 BMP2KQ9NSY1 1161 aaPredicted RBP10.24□□□□□ -0.77
PTPN22-204ENST00000469077 PLEKHG5O94827 1062 aa10.22□□□□□ -0.77
PTPN22-204ENST00000469077 POTEFA5A3E0 1075 aa10.21□□□□□ -0.77
PTPN22-204ENST00000469077 TIE1P35590 1138 aa10.21□□□□□ -0.77
PTPN22-204ENST00000469077 MAP3K13O43283 966 aa10.2□□□□□ -0.78
PTPN22-204ENST00000469077 TRPC6Q9Y210 931 aa10.2□□□□□ -0.78
PTPN22-204ENST00000469077 MIER1Q8N108 512 aa10.18□□□□□ -0.78
PTPN22-204ENST00000469077 RASEFQ8IZ41 740 aa10.16□□□□□ -0.78
PTPN22-204ENST00000469077 TTLL13PA6NNM8 815 aa10.13□□□□□ -0.79
PTPN22-204ENST00000469077 SGIP1Q9BQI5 828 aa10.12□□□□□ -0.79
PTPN22-204ENST00000469077 SEC24BO95487 1268 aa10.11□□□□□ -0.79
PTPN22-204ENST00000469077 COLQQ9Y215 455 aaPredicted RBP10.11□□□□□ -0.79
PTPN22-204ENST00000469077 MMRN1Q13201 1228 aa10.1□□□□□ -0.79
PTPN22-204ENST00000469077 IER5LQ5T953 404 aa10.09□□□□□ -0.79
PTPN22-204ENST00000469077 TRIM35Q9UPQ4 493 aa10.06□□□□□ -0.8
PTPN22-204ENST00000469077 SPNS2Q8IVW8 549 aa10.05□□□□□ -0.8
PTPN22-204ENST00000469077 PLCD3Q8N3E9 789 aa10.05□□□□□ -0.8
PTPN22-204ENST00000469077 PCDHB13Q9Y5F0 798 aa10.05□□□□□ -0.8
PTPN22-204ENST00000469077 ZBTB47Q9UFB7 747 aaPredicted RBP10.04□□□□□ -0.8
PTPN22-204ENST00000469077 NUBP1P53384 320 aa10.02□□□□□ -0.81
PTPN22-204ENST00000469077 ST18O60284 1047 aa10□□□□□ -0.81
PTPN22-204ENST00000469077 IFNL1Q8IU54 200 aa9.99□□□□□ -0.81
PTPN22-204ENST00000469077 SLAIN1Q8ND83 568 aa9.97□□□□□ -0.81
PTPN22-204ENST00000469077 TMEM106CQ9BVX2 250 aa9.96□□□□□ -0.82
PTPN22-204ENST00000469077 FAM212AQ96EL1 285 aa9.95□□□□□ -0.82
PTPN22-204ENST00000469077 PLCG2P16885 1265 aa9.93□□□□□ -0.82
PTPN22-204ENST00000469077 IRX5P78411 483 aaPredicted RBP9.92□□□□□ -0.82
PTPN22-204ENST00000469077 OCEL1Q9H607 264 aa9.88□□□□□ -0.83
PTPN22-204ENST00000469077 TMEM121BQ9BXQ6 578 aaPredicted RBP9.85□□□□□ -0.83
PTPN22-204ENST00000469077 SNPHO15079 494 aa9.83□□□□□ -0.84
PTPN22-204ENST00000469077 FKBP8Q14318 412 aa9.83□□□□□ -0.84
PTPN22-204ENST00000469077 DCAF8Q5TAQ9 597 aa9.82□□□□□ -0.84
PTPN22-204ENST00000469077 PYGBP11216 843 aa9.8□□□□□ -0.84
PTPN22-204ENST00000469077 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.8□□□□□ -0.84
PTPN22-204ENST00000469077 PCDHB8Q9UN66 801 aa9.76□□□□□ -0.85
PTPN22-204ENST00000469077 MARVELD3Q96A59 401 aa9.73□□□□□ -0.85
PTPN22-204ENST00000469077 PDCD7Q8N8D1 485 aaKnown RBP9.71□□□□□ -0.86
PTPN22-204ENST00000469077 FBXO3Q9UK99 471 aa9.71□□□□□ -0.86
PTPN22-204ENST00000469077 L3MBTL3Q96JM7 780 aaPredicted RBP9.7□□□□□ -0.86
PTPN22-204ENST00000469077 ZNF467Q7Z7K2 595 aaPredicted RBP9.69□□□□□ -0.86
PTPN22-204ENST00000469077 MKRN3Q13064 507 aaKnown RBP9.68□□□□□ -0.86
PTPN22-204ENST00000469077 C3orf67Q6ZVT6 689 aa9.68□□□□□ -0.86
PTPN22-204ENST00000469077 GSE1Q14687 1217 aa9.67□□□□□ -0.86
PTPN22-204ENST00000469077 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
PTPN22-204ENST00000469077 KRTAP3-2Q9BYR7 98 aa9.67□□□□□ -0.86
PTPN22-204ENST00000469077 GOLGA2Q08379 1002 aa9.66□□□□□ -0.86
PTPN22-204ENST00000469077 CHRM1P11229 460 aaPredicted RBP9.65□□□□□ -0.86
PTPN22-204ENST00000469077 EMP3P54852 163 aa9.63□□□□□ -0.87
PTPN22-204ENST00000469077 POTEB3A0JP26 581 aa9.62□□□□□ -0.87
PTPN22-204ENST00000469077 POTEBQ6S5H4 581 aa9.62□□□□□ -0.87
PTPN22-204ENST00000469077 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.62□□□□□ -0.87
PTPN22-204ENST00000469077 VASPP50552 380 aaPredicted RBP9.61□□□□□ -0.87
PTPN22-204ENST00000469077 PSEN1P49768 467 aa9.6□□□□□ -0.87
PTPN22-204ENST00000469077 ILDR1Q86SU0 546 aaPredicted RBP9.6□□□□□ -0.87
PTPN22-204ENST00000469077 KLHL34Q8N239 644 aa9.6□□□□□ -0.87
PTPN22-204ENST00000469077 HS3ST6Q96QI5 342 aa9.59□□□□□ -0.87
PTPN22-204ENST00000469077 FAM205CA6NFA0 338 aa9.57□□□□□ -0.88
PTPN22-204ENST00000469077 PDAP1Q13442 181 aaKnown RBP9.53□□□□□ -0.88
PTPN22-204ENST00000469077 DPY19L2Q6NUT2 758 aa9.51□□□□□ -0.89
PTPN22-204ENST00000469077 BOLA1Q9Y3E2 137 aa9.5□□□□□ -0.89
PTPN22-204ENST00000469077 HOXB3P14651 431 aaPredicted RBP9.49□□□□□ -0.89
PTPN22-204ENST00000469077 G3V3G9 751 aa9.48□□□□□ -0.89
PTPN22-204ENST00000469077 CABP2Q9NPB3 220 aa9.47□□□□□ -0.89
PTPN22-204ENST00000469077 HOXB1P14653 301 aaPredicted RBP9.46□□□□□ -0.9
PTPN22-204ENST00000469077 IFNLR1Q8IU57 520 aaPredicted RBP9.45□□□□□ -0.9
PTPN22-204ENST00000469077 ZNF710Q8N1W2 664 aa9.44□□□□□ -0.9
PTPN22-204ENST00000469077 DOK7Q18PE1 504 aa9.42□□□□□ -0.9
PTPN22-204ENST00000469077 SPOCK2Q92563 424 aa9.41□□□□□ -0.9
PTPN22-204ENST00000469077 RNF166Q96A37 237 aaPredicted RBP9.41□□□□□ -0.9
PTPN22-204ENST00000469077 ERBB3P21860 1342 aa9.4□□□□□ -0.9
PTPN22-204ENST00000469077 CIZ1Q9ULV3 898 aaPredicted RBP9.4□□□□□ -0.9
PTPN22-204ENST00000469077 RIMBP2O15034 1052 aa9.37□□□□□ -0.91
PTPN22-204ENST00000469077 ZSWIM6Q9HCJ5 1215 aa9.34□□□□□ -0.91
PTPN22-204ENST00000469077 EFCAB3Q8N7B9 438 aa9.33□□□□□ -0.92
PTPN22-204ENST00000469077 VARS2Q5ST30 1063 aaKnown RBP9.32□□□□□ -0.92
PTPN22-204ENST00000469077 ZNF687Q8N1G0 1237 aa9.3□□□□□ -0.92
PTPN22-204ENST00000469077 TRIM41Q8WV44 630 aa9.3□□□□□ -0.92
PTPN22-204ENST00000469077 MYT1LQ9UL68 1186 aa9.3□□□□□ -0.92
PTPN22-204ENST00000469077 TMEM92Q6UXU6 159 aa9.28□□□□□ -0.92
PTPN22-204ENST00000469077 MICALL2Q8IY33 904 aa9.28□□□□□ -0.92
PTPN22-204ENST00000469077 GPR153Q6NV75 609 aa9.27□□□□□ -0.93
PTPN22-204ENST00000469077 SOX12O15370 315 aa9.26□□□□□ -0.93
PTPN22-204ENST00000469077 PTGER2P43116 358 aa9.24□□□□□ -0.93
PTPN22-204ENST00000469077 RNF25Q96BH1 459 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms