RNA–Protein interactions for RNA: ENST00000469034.1

SUMO1-210, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-210ENST00000469034 ATMINO43313 823 aaPredicted RBP12.94□□□□□ -0.34
SUMO1-210ENST00000469034 METRNQ9UJH8 293 aa12.94□□□□□ -0.34
SUMO1-210ENST00000469034 SLC39A7Q92504 469 aa12.92□□□□□ -0.34
SUMO1-210ENST00000469034 CCDC61Q9Y6R9 512 aa12.91□□□□□ -0.34
SUMO1-210ENST00000469034 C7P10643 843 aa12.9□□□□□ -0.34
SUMO1-210ENST00000469034 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
SUMO1-210ENST00000469034 MIER1Q8N108 512 aa12.86□□□□□ -0.35
SUMO1-210ENST00000469034 KIF12Q96FN5 646 aa12.85□□□□□ -0.35
SUMO1-210ENST00000469034 ATN1P54259 1190 aaPredicted RBP12.83□□□□□ -0.36
SUMO1-210ENST00000469034 POTEMA6NI47 508 aa12.82□□□□□ -0.36
SUMO1-210ENST00000469034 POTEJP0CG39 1038 aa12.82□□□□□ -0.36
SUMO1-210ENST00000469034 RASEFQ8IZ41 740 aa12.79□□□□□ -0.36
SUMO1-210ENST00000469034 MAMSTRQ6ZN01 415 aa12.78□□□□□ -0.36
SUMO1-210ENST00000469034 MAP3K13O43283 966 aa12.77□□□□□ -0.37
SUMO1-210ENST00000469034 POTEGQ6S5H5 508 aa12.77□□□□□ -0.37
SUMO1-210ENST00000469034 BMP2KQ9NSY1 1161 aaPredicted RBP12.77□□□□□ -0.37
SUMO1-210ENST00000469034 TRPC6Q9Y210 931 aa12.77□□□□□ -0.37
SUMO1-210ENST00000469034 PLCD3Q8N3E9 789 aa12.73□□□□□ -0.37
SUMO1-210ENST00000469034 TIE1P35590 1138 aa12.72□□□□□ -0.37
SUMO1-210ENST00000469034 SCUBE2Q9NQ36 999 aa12.72□□□□□ -0.37
SUMO1-210ENST00000469034 POTEFA5A3E0 1075 aa12.69□□□□□ -0.38
SUMO1-210ENST00000469034 TTLL13PA6NNM8 815 aa12.65□□□□□ -0.38
SUMO1-210ENST00000469034 ZBTB47Q9UFB7 747 aaPredicted RBP12.64□□□□□ -0.39
SUMO1-210ENST00000469034 SEC24BO95487 1268 aa12.63□□□□□ -0.39
SUMO1-210ENST00000469034 FAM163AQ96GL9 167 aaPredicted RBP12.63□□□□□ -0.39
SUMO1-210ENST00000469034 PCDHB13Q9Y5F0 798 aa12.62□□□□□ -0.39
SUMO1-210ENST00000469034 SGIP1Q9BQI5 828 aa12.6□□□□□ -0.39
SUMO1-210ENST00000469034 PCDH10Q9P2E7 1040 aa12.6□□□□□ -0.39
SUMO1-210ENST00000469034 COLQQ9Y215 455 aaPredicted RBP12.6□□□□□ -0.39
SUMO1-210ENST00000469034 NUBP1P53384 320 aa12.59□□□□□ -0.39
SUMO1-210ENST00000469034 LCE2DQ5TA82 110 aaPredicted RBP12.59□□□□□ -0.39
SUMO1-210ENST00000469034 TRIM35Q9UPQ4 493 aa12.58□□□□□ -0.4
SUMO1-210ENST00000469034 FAM212AQ96EL1 285 aa12.54□□□□□ -0.4
SUMO1-210ENST00000469034 IER5LQ5T953 404 aa12.53□□□□□ -0.4
SUMO1-210ENST00000469034 IFNL1Q8IU54 200 aa12.53□□□□□ -0.4
SUMO1-210ENST00000469034 FKBP8Q14318 412 aa12.52□□□□□ -0.41
SUMO1-210ENST00000469034 TMEM106CQ9BVX2 250 aa12.48□□□□□ -0.41
SUMO1-210ENST00000469034 DCAF8Q5TAQ9 597 aa12.42□□□□□ -0.42
SUMO1-210ENST00000469034 PLCG2P16885 1265 aa12.41□□□□□ -0.42
SUMO1-210ENST00000469034 SLAIN1Q8ND83 568 aa12.41□□□□□ -0.42
SUMO1-210ENST00000469034 PYGBP11216 843 aa12.39□□□□□ -0.43
SUMO1-210ENST00000469034 IRX5P78411 483 aaPredicted RBP12.36□□□□□ -0.43
SUMO1-210ENST00000469034 FBXO3Q9UK99 471 aa12.34□□□□□ -0.43
SUMO1-210ENST00000469034 CDAN1Q8IWY9 1227 aa12.33□□□□□ -0.44
SUMO1-210ENST00000469034 PCDHB8Q9UN66 801 aa12.32□□□□□ -0.44
SUMO1-210ENST00000469034 ST18O60284 1047 aa12.31□□□□□ -0.44
SUMO1-210ENST00000469034 OCEL1Q9H607 264 aa12.31□□□□□ -0.44
SUMO1-210ENST00000469034 KLHL34Q8N239 644 aa12.24□□□□□ -0.45
SUMO1-210ENST00000469034 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.22□□□□□ -0.45
SUMO1-210ENST00000469034 GSE1Q14687 1217 aa12.21□□□□□ -0.45
SUMO1-210ENST00000469034 VASPP50552 380 aaPredicted RBP12.18□□□□□ -0.46
SUMO1-210ENST00000469034 ZNF467Q7Z7K2 595 aaPredicted RBP12.18□□□□□ -0.46
SUMO1-210ENST00000469034 SNPHO15079 494 aa12.17□□□□□ -0.46
SUMO1-210ENST00000469034 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
SUMO1-210ENST00000469034 MKRN3Q13064 507 aaKnown RBP12.15□□□□□ -0.46
SUMO1-210ENST00000469034 TMEM121BQ9BXQ6 578 aaPredicted RBP12.15□□□□□ -0.46
SUMO1-210ENST00000469034 PDCD7Q8N8D1 485 aaKnown RBP12.14□□□□□ -0.47
SUMO1-210ENST00000469034 CHRM1P11229 460 aaPredicted RBP12.11□□□□□ -0.47
SUMO1-210ENST00000469034 C3orf67Q6ZVT6 689 aa12.11□□□□□ -0.47
SUMO1-210ENST00000469034 MARVELD3Q96A59 401 aa12.1□□□□□ -0.47
SUMO1-210ENST00000469034 L3MBTL3Q96JM7 780 aaPredicted RBP12.09□□□□□ -0.47
SUMO1-210ENST00000469034 PSEN1P49768 467 aa12.08□□□□□ -0.48
SUMO1-210ENST00000469034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.48
SUMO1-210ENST00000469034 SPNS2Q8IVW8 549 aa12.02□□□□□ -0.49
SUMO1-210ENST00000469034 MMRN1Q13201 1228 aa12.01□□□□□ -0.49
SUMO1-210ENST00000469034 PDAP1Q13442 181 aaKnown RBP12.01□□□□□ -0.49
SUMO1-210ENST00000469034 EMP3P54852 163 aa11.99□□□□□ -0.49
SUMO1-210ENST00000469034 CIZ1Q9ULV3 898 aaPredicted RBP11.99□□□□□ -0.49
SUMO1-210ENST00000469034 SPOCK2Q92563 424 aa11.97□□□□□ -0.49
SUMO1-210ENST00000469034 DPY19L2Q6NUT2 758 aa11.96□□□□□ -0.49
SUMO1-210ENST00000469034 ILDR1Q86SU0 546 aaPredicted RBP11.96□□□□□ -0.49
SUMO1-210ENST00000469034 CABP2Q9NPB3 220 aa11.96□□□□□ -0.49
SUMO1-210ENST00000469034 IFNLR1Q8IU57 520 aaPredicted RBP11.95□□□□□ -0.5
SUMO1-210ENST00000469034 G3V3G9 751 aa11.93□□□□□ -0.5
SUMO1-210ENST00000469034 FAM205CA6NFA0 338 aa11.91□□□□□ -0.5
SUMO1-210ENST00000469034 HS3ST6Q96QI5 342 aa11.91□□□□□ -0.5
SUMO1-210ENST00000469034 BOLA1Q9Y3E2 137 aa11.9□□□□□ -0.5
SUMO1-210ENST00000469034 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
SUMO1-210ENST00000469034 POTEBQ6S5H4 581 aa11.88□□□□□ -0.51
SUMO1-210ENST00000469034 KRTAP3-3Q9BYR6 98 aa11.85□□□□□ -0.51
SUMO1-210ENST00000469034 KRTAP3-2Q9BYR7 98 aa11.85□□□□□ -0.51
SUMO1-210ENST00000469034 HOXB3P14651 431 aaPredicted RBP11.82□□□□□ -0.52
SUMO1-210ENST00000469034 ZNF710Q8N1W2 664 aa11.8□□□□□ -0.52
SUMO1-210ENST00000469034 EFCAB3Q8N7B9 438 aa11.78□□□□□ -0.52
SUMO1-210ENST00000469034 HOXB1P14653 301 aaPredicted RBP11.76□□□□□ -0.53
SUMO1-210ENST00000469034 DOK7Q18PE1 504 aa11.76□□□□□ -0.53
SUMO1-210ENST00000469034 TRIM41Q8WV44 630 aa11.76□□□□□ -0.53
SUMO1-210ENST00000469034 ERBB3P21860 1342 aa11.73□□□□□ -0.53
SUMO1-210ENST00000469034 RIMBP2O15034 1052 aa11.69□□□□□ -0.54
SUMO1-210ENST00000469034 MICALL2Q8IY33 904 aa11.67□□□□□ -0.54
SUMO1-210ENST00000469034 TMEM92Q6UXU6 159 aa11.65□□□□□ -0.54
SUMO1-210ENST00000469034 RIOK3O14730 519 aaKnown RBP11.64□□□□□ -0.55
SUMO1-210ENST00000469034 SOX12O15370 315 aa11.64□□□□□ -0.55
SUMO1-210ENST00000469034 VARS2Q5ST30 1063 aaKnown RBP11.64□□□□□ -0.55
SUMO1-210ENST00000469034 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
SUMO1-210ENST00000469034 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
SUMO1-210ENST00000469034 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
SUMO1-210ENST00000469034 ZSWIM6Q9HCJ5 1215 aa11.61□□□□□ -0.55
SUMO1-210ENST00000469034 MS4A4AQ96JQ5 239 aa11.6□□□□□ -0.55
SUMO1-210ENST00000469034 PHF8Q9UPP1 1060 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms