RNA–Protein interactions for RNA: ENST00000468286.5

SGIP1-207, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 846 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-207ENST00000468286 TSPYL2Q9H2G4 693 aaPredicted RBP18.97■□□□□ 0.63
SGIP1-207ENST00000468286 SLC39A7Q92504 469 aa18.94■□□□□ 0.62
SGIP1-207ENST00000468286 C7P10643 843 aa18.93■□□□□ 0.62
SGIP1-207ENST00000468286 PLEKHG5O94827 1062 aa18.92■□□□□ 0.62
SGIP1-207ENST00000468286 METRNQ9UJH8 293 aa18.92■□□□□ 0.62
SGIP1-207ENST00000468286 KIF12Q96FN5 646 aa18.88■□□□□ 0.61
SGIP1-207ENST00000468286 MIER1Q8N108 512 aa18.85■□□□□ 0.61
SGIP1-207ENST00000468286 ATN1P54259 1190 aaPredicted RBP18.77■□□□□ 0.6
SGIP1-207ENST00000468286 RASEFQ8IZ41 740 aa18.76■□□□□ 0.59
SGIP1-207ENST00000468286 POTEJP0CG39 1038 aa18.75■□□□□ 0.59
SGIP1-207ENST00000468286 MAMSTRQ6ZN01 415 aa18.75■□□□□ 0.59
SGIP1-207ENST00000468286 BMP2KQ9NSY1 1161 aaPredicted RBP18.72■□□□□ 0.59
SGIP1-207ENST00000468286 MAP3K13O43283 966 aa18.71■□□□□ 0.59
SGIP1-207ENST00000468286 TIE1P35590 1138 aa18.7■□□□□ 0.58
SGIP1-207ENST00000468286 PLSCR2Q9NRY7 297 aa18.68■□□□□ 0.58
SGIP1-207ENST00000468286 PLCD3Q8N3E9 789 aa18.66■□□□□ 0.58
SGIP1-207ENST00000468286 POTEMA6NI47 508 aa18.65■□□□□ 0.58
SGIP1-207ENST00000468286 ZBTB47Q9UFB7 747 aaPredicted RBP18.65■□□□□ 0.58
SGIP1-207ENST00000468286 TRPC6Q9Y210 931 aa18.65■□□□□ 0.58
SGIP1-207ENST00000468286 SGIP1Q9BQI5 828 aa18.61■□□□□ 0.57
SGIP1-207ENST00000468286 POTEGQ6S5H5 508 aa18.6■□□□□ 0.57
SGIP1-207ENST00000468286 SCUBE2Q9NQ36 999 aa18.59■□□□□ 0.57
SGIP1-207ENST00000468286 POTEFA5A3E0 1075 aa18.58■□□□□ 0.56
SGIP1-207ENST00000468286 NUBP1P53384 320 aa18.56■□□□□ 0.56
SGIP1-207ENST00000468286 TTLL13PA6NNM8 815 aa18.55■□□□□ 0.56
SGIP1-207ENST00000468286 PCDH10Q9P2E7 1040 aa18.49■□□□□ 0.55
SGIP1-207ENST00000468286 PCDHB13Q9Y5F0 798 aa18.49■□□□□ 0.55
SGIP1-207ENST00000468286 IER5LQ5T953 404 aa18.47■□□□□ 0.55
SGIP1-207ENST00000468286 FAM212AQ96EL1 285 aa18.44■□□□□ 0.54
SGIP1-207ENST00000468286 SEC24BO95487 1268 aa18.43■□□□□ 0.54
SGIP1-207ENST00000468286 FKBP8Q14318 412 aa18.43■□□□□ 0.54
SGIP1-207ENST00000468286 COLQQ9Y215 455 aaPredicted RBP18.43■□□□□ 0.54
SGIP1-207ENST00000468286 TRIM35Q9UPQ4 493 aa18.42■□□□□ 0.54
SGIP1-207ENST00000468286 LCE2DQ5TA82 110 aaPredicted RBP18.41■□□□□ 0.54
SGIP1-207ENST00000468286 IFNL1Q8IU54 200 aa18.38■□□□□ 0.53
SGIP1-207ENST00000468286 FAM163AQ96GL9 167 aaPredicted RBP18.35■□□□□ 0.53
SGIP1-207ENST00000468286 TMEM106CQ9BVX2 250 aa18.29■□□□□ 0.52
SGIP1-207ENST00000468286 FBXO3Q9UK99 471 aa18.24■□□□□ 0.51
SGIP1-207ENST00000468286 DCAF8Q5TAQ9 597 aa18.18■□□□□ 0.5
SGIP1-207ENST00000468286 PLCG2P16885 1265 aa18.17■□□□□ 0.5
SGIP1-207ENST00000468286 IRX5P78411 483 aaPredicted RBP18.16■□□□□ 0.5
SGIP1-207ENST00000468286 PYGBP11216 843 aa18.13■□□□□ 0.49
SGIP1-207ENST00000468286 SLAIN1Q8ND83 568 aa18.11■□□□□ 0.49
SGIP1-207ENST00000468286 OCEL1Q9H607 264 aa18.08■□□□□ 0.48
SGIP1-207ENST00000468286 PCDHB8Q9UN66 801 aa18.03■□□□□ 0.48
SGIP1-207ENST00000468286 GSE1Q14687 1217 aa18■□□□□ 0.47
SGIP1-207ENST00000468286 ST18O60284 1047 aa17.98■□□□□ 0.47
SGIP1-207ENST00000468286 VASPP50552 380 aaPredicted RBP17.98■□□□□ 0.47
SGIP1-207ENST00000468286 CDAN1Q8IWY9 1227 aa17.96■□□□□ 0.47
SGIP1-207ENST00000468286 ZNF467Q7Z7K2 595 aaPredicted RBP17.95■□□□□ 0.46
SGIP1-207ENST00000468286 KLHL34Q8N239 644 aa17.94■□□□□ 0.46
SGIP1-207ENST00000468286 CHRM1P11229 460 aaPredicted RBP17.93■□□□□ 0.46
SGIP1-207ENST00000468286 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.89■□□□□ 0.45
SGIP1-207ENST00000468286 TMEM121BQ9BXQ6 578 aaPredicted RBP17.87■□□□□ 0.45
SGIP1-207ENST00000468286 SNPHO15079 494 aa17.86■□□□□ 0.45
SGIP1-207ENST00000468286 PDCD7Q8N8D1 485 aaKnown RBP17.85■□□□□ 0.45
SGIP1-207ENST00000468286 GOLGA2Q08379 1002 aa17.81■□□□□ 0.44
SGIP1-207ENST00000468286 MKRN3Q13064 507 aaKnown RBP17.81■□□□□ 0.44
SGIP1-207ENST00000468286 PSEN1P49768 467 aa17.76■□□□□ 0.43
SGIP1-207ENST00000468286 L3MBTL3Q96JM7 780 aaPredicted RBP17.76■□□□□ 0.43
SGIP1-207ENST00000468286 C3orf67Q6ZVT6 689 aa17.72■□□□□ 0.43
SGIP1-207ENST00000468286 ILDR1Q86SU0 546 aaPredicted RBP17.7■□□□□ 0.42
SGIP1-207ENST00000468286 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.7■□□□□ 0.42
SGIP1-207ENST00000468286 PDAP1Q13442 181 aaKnown RBP17.68■□□□□ 0.42
SGIP1-207ENST00000468286 SPOCK2Q92563 424 aa17.66■□□□□ 0.42
SGIP1-207ENST00000468286 IFNLR1Q8IU57 520 aaPredicted RBP17.62■□□□□ 0.41
SGIP1-207ENST00000468286 MARVELD3Q96A59 401 aa17.61■□□□□ 0.41
SGIP1-207ENST00000468286 CIZ1Q9ULV3 898 aaPredicted RBP17.56■□□□□ 0.4
SGIP1-207ENST00000468286 SPNS2Q8IVW8 549 aa17.55■□□□□ 0.4
SGIP1-207ENST00000468286 MMRN1Q13201 1228 aa17.52■□□□□ 0.4
SGIP1-207ENST00000468286 CABP2Q9NPB3 220 aa17.52■□□□□ 0.4
SGIP1-207ENST00000468286 EMP3P54852 163 aa17.5■□□□□ 0.39
SGIP1-207ENST00000468286 DPY19L2Q6NUT2 758 aa17.5■□□□□ 0.39
SGIP1-207ENST00000468286 BOLA1Q9Y3E2 137 aa17.47■□□□□ 0.39
SGIP1-207ENST00000468286 G3V3G9 751 aa17.44■□□□□ 0.38
SGIP1-207ENST00000468286 TRIM41Q8WV44 630 aa17.43■□□□□ 0.38
SGIP1-207ENST00000468286 HS3ST6Q96QI5 342 aa17.39■□□□□ 0.37
SGIP1-207ENST00000468286 POTEB3A0JP26 581 aa17.36■□□□□ 0.37
SGIP1-207ENST00000468286 POTEBQ6S5H4 581 aa17.36■□□□□ 0.37
SGIP1-207ENST00000468286 FAM205CA6NFA0 338 aa17.35■□□□□ 0.37
SGIP1-207ENST00000468286 HOXB3P14651 431 aaPredicted RBP17.35■□□□□ 0.37
SGIP1-207ENST00000468286 KRTAP3-3Q9BYR6 98 aa17.33■□□□□ 0.36
SGIP1-207ENST00000468286 KRTAP3-2Q9BYR7 98 aa17.33■□□□□ 0.36
SGIP1-207ENST00000468286 EFCAB3Q8N7B9 438 aa17.28■□□□□ 0.36
SGIP1-207ENST00000468286 DOK7Q18PE1 504 aa17.26■□□□□ 0.35
SGIP1-207ENST00000468286 HOXB1P14653 301 aaPredicted RBP17.25■□□□□ 0.35
SGIP1-207ENST00000468286 ZNF710Q8N1W2 664 aa17.24■□□□□ 0.35
SGIP1-207ENST00000468286 SOX12O15370 315 aa17.17■□□□□ 0.34
SGIP1-207ENST00000468286 RIOK3O14730 519 aaKnown RBP17.16■□□□□ 0.34
SGIP1-207ENST00000468286 RIMBP2O15034 1052 aa17.15■□□□□ 0.34
SGIP1-207ENST00000468286 MICALL2Q8IY33 904 aa17.15■□□□□ 0.34
SGIP1-207ENST00000468286 RNF25Q96BH1 459 aaPredicted RBP17.11■□□□□ 0.33
SGIP1-207ENST00000468286 ZSWIM6Q9HCJ5 1215 aa17.11■□□□□ 0.33
SGIP1-207ENST00000468286 ERBB3P21860 1342 aa17.11■□□□□ 0.33
SGIP1-207ENST00000468286 VGFO15240 615 aaPredicted RBP17.1■□□□□ 0.33
SGIP1-207ENST00000468286 TMEM92Q6UXU6 159 aa17.09■□□□□ 0.33
SGIP1-207ENST00000468286 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.07■□□□□ 0.32
SGIP1-207ENST00000468286 ZFP91Q96JP5 570 aaPredicted RBP17.07■□□□□ 0.32
SGIP1-207ENST00000468286 MS4A4AQ96JQ5 239 aa17.07■□□□□ 0.32
SGIP1-207ENST00000468286 PHF8Q9UPP1 1060 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms