RNA–Protein interactions for RNA: ENST00000468273.1

NF1-207, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-207ENST00000468273 TRIM41Q8WV44 630 aa13.6□□□□□ -0.23
NF1-207ENST00000468273 ZBTB47Q9UFB7 747 aaPredicted RBP13.57□□□□□ -0.24
NF1-207ENST00000468273 PLEKHG5O94827 1062 aa13.5□□□□□ -0.25
NF1-207ENST00000468273 RNF25Q96BH1 459 aaPredicted RBP13.5□□□□□ -0.25
NF1-207ENST00000468273 REM2Q8IYK8 340 aaPredicted RBP13.45□□□□□ -0.26
NF1-207ENST00000468273 NKX1-1Q15270 411 aaPredicted RBP13.44□□□□□ -0.26
NF1-207ENST00000468273 TIMELESSQ9UNS1 1208 aa13.44□□□□□ -0.26
NF1-207ENST00000468273 GTPBP6O43824 516 aaPredicted RBP13.39□□□□□ -0.27
NF1-207ENST00000468273 GSE1Q14687 1217 aa13.39□□□□□ -0.27
NF1-207ENST00000468273 TULP1O00294 542 aaPredicted RBP13.36□□□□□ -0.27
NF1-207ENST00000468273 RIOK3O14730 519 aaKnown RBP13.34□□□□□ -0.27
NF1-207ENST00000468273 NUBP1P53384 320 aa13.33□□□□□ -0.28
NF1-207ENST00000468273 PIP4P2Q8N4L2 257 aa13.33□□□□□ -0.28
NF1-207ENST00000468273 GTF3C3Q9Y5Q9 886 aa13.32□□□□□ -0.28
NF1-207ENST00000468273 SP7Q8TDD2 431 aaPredicted RBP13.31□□□□□ -0.28
NF1-207ENST00000468273 PITPNM1O00562 1244 aa13.3□□□□□ -0.28
NF1-207ENST00000468273 FXR2P51116 673 aaKnown RBP eCLIP13.25□□□□□ -0.294e-8■■□□□ 13.2
NF1-207ENST00000468273 STK25O00506 426 aa13.24□□□□□ -0.29
NF1-207ENST00000468273 VGFO15240 615 aaPredicted RBP13.23□□□□□ -0.29
NF1-207ENST00000468273 DCAF8Q5TAQ9 597 aa13.21□□□□□ -0.29
NF1-207ENST00000468273 TMEM132AQ24JP5 1023 aa13.19□□□□□ -0.3
NF1-207ENST00000468273 ERICH6Q7L0X2 663 aa13.19□□□□□ -0.3
NF1-207ENST00000468273 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
NF1-207ENST00000468273 CHRM1P11229 460 aaPredicted RBP13.15□□□□□ -0.3
NF1-207ENST00000468273 FAM212AQ96EL1 285 aa13.15□□□□□ -0.3
NF1-207ENST00000468273 HAX1O00165 279 aa13.14□□□□□ -0.31
NF1-207ENST00000468273 RYDENQ9NUL5 291 aaKnown RBP13.14□□□□□ -0.31
NF1-207ENST00000468273 P3H3Q8IVL6 736 aa13.11□□□□□ -0.31
NF1-207ENST00000468273 ARXQ96QS3 562 aa13.11□□□□□ -0.31
NF1-207ENST00000468273 BCL11BQ9C0K0 894 aaPredicted RBP13.11□□□□□ -0.31
NF1-207ENST00000468273 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.1□□□□□ -0.31
NF1-207ENST00000468273 ZFP91Q96JP5 570 aaPredicted RBP13.1□□□□□ -0.31
NF1-207ENST00000468273 STK24Q9Y6E0 443 aa13.1□□□□□ -0.31
NF1-207ENST00000468273 MNX1P50219 401 aaPredicted RBP13.09□□□□□ -0.31
NF1-207ENST00000468273 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
NF1-207ENST00000468273 CREBZFQ9NS37 354 aa13.06□□□□□ -0.32
NF1-207ENST00000468273 RASEFQ8IZ41 740 aa13.03□□□□□ -0.32
NF1-207ENST00000468273 KCNV2Q8TDN2 545 aa12.99□□□□□ -0.33
NF1-207ENST00000468273 LMOD2Q6P5Q4 547 aa12.98□□□□□ -0.33
NF1-207ENST00000468273 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.98□□□□□ -0.33
NF1-207ENST00000468273 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
NF1-207ENST00000468273 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.33
NF1-207ENST00000468273 CADPS2Q86UW7 1296 aa12.96□□□□□ -0.33
NF1-207ENST00000468273 PYGBP11216 843 aa12.94□□□□□ -0.34
NF1-207ENST00000468273 C14orf37Q86TY3 774 aa12.94□□□□□ -0.34
NF1-207ENST00000468273 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
NF1-207ENST00000468273 DAXXQ9UER7 740 aaPredicted RBP12.91□□□□□ -0.34
NF1-207ENST00000468273 WDR70Q9NW82 654 aa12.9□□□□□ -0.34
NF1-207ENST00000468273 BRPF1P55201 1214 aaPredicted RBP12.88□□□□□ -0.35
NF1-207ENST00000468273 EVX2Q03828 476 aa12.88□□□□□ -0.35
NF1-207ENST00000468273 C19orf67A6NJJ6 358 aa12.83□□□□□ -0.36
NF1-207ENST00000468273 HOMEZQ8IX15 550 aa12.83□□□□□ -0.36
NF1-207ENST00000468273 ZNF467Q7Z7K2 595 aaPredicted RBP12.78□□□□□ -0.36
NF1-207ENST00000468273 ZC3H15Q8WU90 426 aaKnown RBP12.77□□□□□ -0.37
NF1-207ENST00000468273 ARHGEF1Q92888 912 aaKnown RBP12.77□□□□□ -0.37
NF1-207ENST00000468273 PDAP1Q13442 181 aaKnown RBP12.75□□□□□ -0.37
NF1-207ENST00000468273 MFRPQ9BY79 579 aa12.75□□□□□ -0.37
NF1-207ENST00000468273 CHADLQ6NUI6 762 aa12.71□□□□□ -0.37
NF1-207ENST00000468273 TESPA1A2RU30 521 aaPredicted RBP12.7□□□□□ -0.38
NF1-207ENST00000468273 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
NF1-207ENST00000468273 E2F4Q16254 413 aa12.67□□□□□ -0.38
NF1-207ENST00000468273 SLC24A3Q9HC58 644 aa12.67□□□□□ -0.38
NF1-207ENST00000468273 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
NF1-207ENST00000468273 PCDHB13Q9Y5F0 798 aa12.66□□□□□ -0.38
NF1-207ENST00000468273 SEMA3EO15041 775 aa12.65□□□□□ -0.38
NF1-207ENST00000468273 GABBR2O75899 941 aa12.65□□□□□ -0.38
NF1-207ENST00000468273 PPP1R37O75864 691 aa12.64□□□□□ -0.39
NF1-207ENST00000468273 TSPYL2Q9H2G4 693 aaPredicted RBP12.64□□□□□ -0.39
NF1-207ENST00000468273 PSEN1P49768 467 aa12.63□□□□□ -0.39
NF1-207ENST00000468273 FBXO22Q8NEZ5 403 aa12.61□□□□□ -0.39
NF1-207ENST00000468273 ZMYND10O75800 440 aa12.59□□□□□ -0.39
NF1-207ENST00000468273 ZNF579Q8NAF0 562 aaKnown RBP12.59□□□□□ -0.39
NF1-207ENST00000468273 FARP1Q9Y4F1 1045 aaPredicted RBP12.57□□□□□ -0.4
NF1-207ENST00000468273 SUPT5HO00267 1087 aaKnown RBP12.56□□□□□ -0.4
NF1-207ENST00000468273 CLCN6P51797 869 aa12.56□□□□□ -0.4
NF1-207ENST00000468273 CCDC61Q9Y6R9 512 aa12.56□□□□□ -0.4
NF1-207ENST00000468273 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
NF1-207ENST00000468273 NLRP6P59044 892 aa12.55□□□□□ -0.4
NF1-207ENST00000468273 NCKAP5LQ9HCH0 1330 aa12.53□□□□□ -0.4
NF1-207ENST00000468273 EFCAB3Q8N7B9 438 aa12.52□□□□□ -0.41
NF1-207ENST00000468273 SOX12O15370 315 aa12.51□□□□□ -0.41
NF1-207ENST00000468273 ARIH1Q9Y4X5 557 aaPredicted RBP12.51□□□□□ -0.41
NF1-207ENST00000468273 SMYD5Q6GMV2 418 aa12.5□□□□□ -0.41
NF1-207ENST00000468273 PHF8Q9UPP1 1060 aa12.5□□□□□ -0.41
NF1-207ENST00000468273 MFSD10Q14728 455 aa12.49□□□□□ -0.41
NF1-207ENST00000468273 BARGINQ6ZT62 677 aa12.49□□□□□ -0.41
NF1-207ENST00000468273 LHX8Q68G74 356 aa12.46□□□□□ -0.41
NF1-207ENST00000468273 IFNL1Q8IU54 200 aa12.46□□□□□ -0.41
NF1-207ENST00000468273 CABP2Q9NPB3 220 aa12.46□□□□□ -0.41
NF1-207ENST00000468273 LARP6Q9BRS8 491 aaKnown RBP12.45□□□□□ -0.42
NF1-207ENST00000468273 CRISPLD2Q9H0B8 497 aa12.44□□□□□ -0.42
NF1-207ENST00000468273 PDE4AP27815 886 aa12.42□□□□□ -0.42
NF1-207ENST00000468273 CAMK2BQ13554 666 aa12.41□□□□□ -0.42
NF1-207ENST00000468273 AK7Q96M32 723 aa12.4□□□□□ -0.42
NF1-207ENST00000468273 MS4A4AQ96JQ5 239 aa12.39□□□□□ -0.43
NF1-207ENST00000468273 GPBP1L1Q9HC44 474 aaPredicted RBP12.39□□□□□ -0.43
NF1-207ENST00000468273 DDX27Q96GQ7 796 aaKnown RBP12.38□□□□□ -0.43
NF1-207ENST00000468273 MAP3K13O43283 966 aa12.36□□□□□ -0.43
NF1-207ENST00000468273 POTEIP0CG38 1075 aa12.35□□□□□ -0.43
NF1-207ENST00000468273 KIF12Q96FN5 646 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms