RNA–Protein interactions for RNA: ENST00000468108.1

CCDC66-211, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-211ENST00000468108 ATMINO43313 823 aaPredicted RBP14.72□□□□□ -0.05
CCDC66-211ENST00000468108 SLC39A7Q92504 469 aa14.71□□□□□ -0.05
CCDC66-211ENST00000468108 C7P10643 843 aa14.69□□□□□ -0.06
CCDC66-211ENST00000468108 POTEJP0CG39 1038 aa14.66□□□□□ -0.06
CCDC66-211ENST00000468108 EHMT2Q96KQ7 1210 aa14.66□□□□□ -0.06
CCDC66-211ENST00000468108 TSPYL2Q9H2G4 693 aaPredicted RBP14.62□□□□□ -0.07
CCDC66-211ENST00000468108 MAMSTRQ6ZN01 415 aa14.61□□□□□ -0.07
CCDC66-211ENST00000468108 CCDC61Q9Y6R9 512 aa14.58□□□□□ -0.08
CCDC66-211ENST00000468108 ATN1P54259 1190 aaPredicted RBP14.57□□□□□ -0.08
CCDC66-211ENST00000468108 PCDH10Q9P2E7 1040 aa14.57□□□□□ -0.08
CCDC66-211ENST00000468108 SCUBE2Q9NQ36 999 aa14.53□□□□□ -0.08
CCDC66-211ENST00000468108 PROM2Q8N271 834 aa14.52□□□□□ -0.09
CCDC66-211ENST00000468108 KIF12Q96FN5 646 aa14.52□□□□□ -0.09
CCDC66-211ENST00000468108 LCE2DQ5TA82 110 aaPredicted RBP14.5□□□□□ -0.09
CCDC66-211ENST00000468108 FAM163AQ96GL9 167 aaPredicted RBP14.47□□□□□ -0.09
CCDC66-211ENST00000468108 BMP2KQ9NSY1 1161 aaPredicted RBP14.47□□□□□ -0.09
CCDC66-211ENST00000468108 POTEFA5A3E0 1075 aa14.45□□□□□ -0.1
CCDC66-211ENST00000468108 TRPC6Q9Y210 931 aa14.45□□□□□ -0.1
CCDC66-211ENST00000468108 MAP3K13O43283 966 aa14.41□□□□□ -0.1
CCDC66-211ENST00000468108 TIE1P35590 1138 aa14.4□□□□□ -0.1
CCDC66-211ENST00000468108 PLEKHG5O94827 1062 aa14.36□□□□□ -0.11
CCDC66-211ENST00000468108 RASEFQ8IZ41 740 aa14.36□□□□□ -0.11
CCDC66-211ENST00000468108 MIER1Q8N108 512 aa14.33□□□□□ -0.12
CCDC66-211ENST00000468108 COLQQ9Y215 455 aaPredicted RBP14.32□□□□□ -0.12
CCDC66-211ENST00000468108 TTLL13PA6NNM8 815 aa14.31□□□□□ -0.12
CCDC66-211ENST00000468108 SEC24BO95487 1268 aa14.3□□□□□ -0.12
CCDC66-211ENST00000468108 TRIM35Q9UPQ4 493 aa14.23□□□□□ -0.13
CCDC66-211ENST00000468108 IER5LQ5T953 404 aa14.22□□□□□ -0.13
CCDC66-211ENST00000468108 PCDHB13Q9Y5F0 798 aa14.21□□□□□ -0.13
CCDC66-211ENST00000468108 SGIP1Q9BQI5 828 aa14.2□□□□□ -0.14
CCDC66-211ENST00000468108 CDAN1Q8IWY9 1227 aa14.18□□□□□ -0.14
CCDC66-211ENST00000468108 PLCD3Q8N3E9 789 aa14.17□□□□□ -0.14
CCDC66-211ENST00000468108 SLAIN1Q8ND83 568 aa14.12□□□□□ -0.15
CCDC66-211ENST00000468108 IFNL1Q8IU54 200 aa14.11□□□□□ -0.15
CCDC66-211ENST00000468108 NUBP1P53384 320 aa14.1□□□□□ -0.15
CCDC66-211ENST00000468108 ZBTB47Q9UFB7 747 aaPredicted RBP14.09□□□□□ -0.15
CCDC66-211ENST00000468108 ST18O60284 1047 aa14.08□□□□□ -0.16
CCDC66-211ENST00000468108 TMEM106CQ9BVX2 250 aa14.08□□□□□ -0.16
CCDC66-211ENST00000468108 PLCG2P16885 1265 aa14.05□□□□□ -0.16
CCDC66-211ENST00000468108 FAM212AQ96EL1 285 aa14.03□□□□□ -0.16
CCDC66-211ENST00000468108 IRX5P78411 483 aaPredicted RBP13.99□□□□□ -0.17
CCDC66-211ENST00000468108 OCEL1Q9H607 264 aa13.9□□□□□ -0.18
CCDC66-211ENST00000468108 TMEM121BQ9BXQ6 578 aaPredicted RBP13.88□□□□□ -0.19
CCDC66-211ENST00000468108 SNPHO15079 494 aa13.85□□□□□ -0.19
CCDC66-211ENST00000468108 PYGBP11216 843 aa13.85□□□□□ -0.19
CCDC66-211ENST00000468108 MMRN1Q13201 1228 aa13.85□□□□□ -0.19
CCDC66-211ENST00000468108 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.85□□□□□ -0.19
CCDC66-211ENST00000468108 SPNS2Q8IVW8 549 aa13.84□□□□□ -0.19
CCDC66-211ENST00000468108 DCAF8Q5TAQ9 597 aa13.83□□□□□ -0.2
CCDC66-211ENST00000468108 PCDHB8Q9UN66 801 aa13.81□□□□□ -0.2
CCDC66-211ENST00000468108 MARVELD3Q96A59 401 aa13.8□□□□□ -0.2
CCDC66-211ENST00000468108 FKBP8Q14318 412 aa13.74□□□□□ -0.21
CCDC66-211ENST00000468108 PDCD7Q8N8D1 485 aaKnown RBP13.71□□□□□ -0.21
CCDC66-211ENST00000468108 C3orf67Q6ZVT6 689 aa13.7□□□□□ -0.22
CCDC66-211ENST00000468108 EMP3P54852 163 aa13.67□□□□□ -0.22
CCDC66-211ENST00000468108 GOLGA2Q08379 1002 aa13.65□□□□□ -0.22
CCDC66-211ENST00000468108 MKRN3Q13064 507 aaKnown RBP13.65□□□□□ -0.22
CCDC66-211ENST00000468108 L3MBTL3Q96JM7 780 aaPredicted RBP13.65□□□□□ -0.22
CCDC66-211ENST00000468108 ZNF467Q7Z7K2 595 aaPredicted RBP13.64□□□□□ -0.23
CCDC66-211ENST00000468108 GSE1Q14687 1217 aa13.59□□□□□ -0.23
CCDC66-211ENST00000468108 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
CCDC66-211ENST00000468108 HS3ST6Q96QI5 342 aa13.58□□□□□ -0.24
CCDC66-211ENST00000468108 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCDC66-211ENST00000468108 POTEB3A0JP26 581 aa13.57□□□□□ -0.24
CCDC66-211ENST00000468108 POTEBQ6S5H4 581 aa13.57□□□□□ -0.24
CCDC66-211ENST00000468108 KRTAP3-3Q9BYR6 98 aa13.57□□□□□ -0.24
CCDC66-211ENST00000468108 KRTAP3-2Q9BYR7 98 aa13.57□□□□□ -0.24
CCDC66-211ENST00000468108 FAM205CA6NFA0 338 aa13.56□□□□□ -0.24
CCDC66-211ENST00000468108 PSEN1P49768 467 aa13.53□□□□□ -0.24
CCDC66-211ENST00000468108 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
CCDC66-211ENST00000468108 CHRM1P11229 460 aaPredicted RBP13.52□□□□□ -0.25
CCDC66-211ENST00000468108 ILDR1Q86SU0 546 aaPredicted RBP13.47□□□□□ -0.25
CCDC66-211ENST00000468108 VASPP50552 380 aaPredicted RBP13.46□□□□□ -0.25
CCDC66-211ENST00000468108 DPY19L2Q6NUT2 758 aa13.45□□□□□ -0.26
CCDC66-211ENST00000468108 PDAP1Q13442 181 aaKnown RBP13.43□□□□□ -0.26
CCDC66-211ENST00000468108 HOXB3P14651 431 aaPredicted RBP13.41□□□□□ -0.26
CCDC66-211ENST00000468108 G3V3G9 751 aa13.4□□□□□ -0.26
CCDC66-211ENST00000468108 BOLA1Q9Y3E2 137 aa13.39□□□□□ -0.27
CCDC66-211ENST00000468108 CABP2Q9NPB3 220 aa13.38□□□□□ -0.27
CCDC66-211ENST00000468108 HOXB1P14653 301 aaPredicted RBP13.34□□□□□ -0.27
CCDC66-211ENST00000468108 ZNF710Q8N1W2 664 aa13.34□□□□□ -0.27
CCDC66-211ENST00000468108 ERBB3P21860 1342 aa13.31□□□□□ -0.28
CCDC66-211ENST00000468108 DOK7Q18PE1 504 aa13.3□□□□□ -0.28
CCDC66-211ENST00000468108 CIZ1Q9ULV3 898 aaPredicted RBP13.26□□□□□ -0.29
CCDC66-211ENST00000468108 RNF166Q96A37 237 aaPredicted RBP13.24□□□□□ -0.29
CCDC66-211ENST00000468108 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
CCDC66-211ENST00000468108 RIMBP2O15034 1052 aa13.22□□□□□ -0.29
CCDC66-211ENST00000468108 VARS2Q5ST30 1063 aaKnown RBP13.21□□□□□ -0.29
CCDC66-211ENST00000468108 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
CCDC66-211ENST00000468108 EFCAB3Q8N7B9 438 aa13.16□□□□□ -0.3
CCDC66-211ENST00000468108 MYT1LQ9UL68 1186 aa13.16□□□□□ -0.3
CCDC66-211ENST00000468108 MICALL2Q8IY33 904 aa13.12□□□□□ -0.31
CCDC66-211ENST00000468108 ZSWIM6Q9HCJ5 1215 aa13.12□□□□□ -0.31
CCDC66-211ENST00000468108 TMEM92Q6UXU6 159 aa13.11□□□□□ -0.31
CCDC66-211ENST00000468108 ZNF687Q8N1G0 1237 aa13.11□□□□□ -0.31
CCDC66-211ENST00000468108 GPR153Q6NV75 609 aa13.07□□□□□ -0.32
CCDC66-211ENST00000468108 PTGER2P43116 358 aa13.03□□□□□ -0.32
CCDC66-211ENST00000468108 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
CCDC66-211ENST00000468108 SOX12O15370 315 aa12.99□□□□□ -0.33
CCDC66-211ENST00000468108 MS4A4AQ96JQ5 239 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms