RNA–Protein interactions for RNA: ENST00000467911.1

NCK1-203, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-203ENST00000467911 POTEJP0CG39 1038 aa14.39□□□□□ -0.11
NCK1-203ENST00000467911 TSPYL2Q9H2G4 693 aaPredicted RBP14.39□□□□□ -0.11
NCK1-203ENST00000467911 METRNQ9UJH8 293 aa14.37□□□□□ -0.11
NCK1-203ENST00000467911 CCDC61Q9Y6R9 512 aa14.34□□□□□ -0.11
NCK1-203ENST00000467911 POTEMA6NI47 508 aa14.3□□□□□ -0.12
NCK1-203ENST00000467911 SLC39A7Q92504 469 aa14.29□□□□□ -0.12
NCK1-203ENST00000467911 C7P10643 843 aa14.28□□□□□ -0.12
NCK1-203ENST00000467911 ATN1P54259 1190 aaPredicted RBP14.28□□□□□ -0.12
NCK1-203ENST00000467911 TRPC6Q9Y210 931 aa14.27□□□□□ -0.13
NCK1-203ENST00000467911 POTEGQ6S5H5 508 aa14.26□□□□□ -0.13
NCK1-203ENST00000467911 KIF12Q96FN5 646 aa14.26□□□□□ -0.13
NCK1-203ENST00000467911 POTEFA5A3E0 1075 aa14.21□□□□□ -0.13
NCK1-203ENST00000467911 RASEFQ8IZ41 740 aa14.2□□□□□ -0.14
NCK1-203ENST00000467911 BMP2KQ9NSY1 1161 aaPredicted RBP14.2□□□□□ -0.14
NCK1-203ENST00000467911 MAP3K13O43283 966 aa14.18□□□□□ -0.14
NCK1-203ENST00000467911 LCE2DQ5TA82 110 aaPredicted RBP14.17□□□□□ -0.14
NCK1-203ENST00000467911 MIER1Q8N108 512 aa14.15□□□□□ -0.14
NCK1-203ENST00000467911 MAMSTRQ6ZN01 415 aa14.1□□□□□ -0.15
NCK1-203ENST00000467911 TIE1P35590 1138 aa14.06□□□□□ -0.16
NCK1-203ENST00000467911 COLQQ9Y215 455 aaPredicted RBP14.06□□□□□ -0.16
NCK1-203ENST00000467911 FAM163AQ96GL9 167 aaPredicted RBP14.05□□□□□ -0.16
NCK1-203ENST00000467911 TTLL13PA6NNM8 815 aa14.04□□□□□ -0.16
NCK1-203ENST00000467911 SCUBE2Q9NQ36 999 aa14.04□□□□□ -0.16
NCK1-203ENST00000467911 PLEKHG5O94827 1062 aa14.03□□□□□ -0.16
NCK1-203ENST00000467911 PLCD3Q8N3E9 789 aa13.98□□□□□ -0.17
NCK1-203ENST00000467911 NUBP1P53384 320 aa13.97□□□□□ -0.17
NCK1-203ENST00000467911 PCDHB13Q9Y5F0 798 aa13.95□□□□□ -0.18
NCK1-203ENST00000467911 PCDH10Q9P2E7 1040 aa13.94□□□□□ -0.18
NCK1-203ENST00000467911 TRIM35Q9UPQ4 493 aa13.94□□□□□ -0.18
NCK1-203ENST00000467911 SEC24BO95487 1268 aa13.93□□□□□ -0.18
NCK1-203ENST00000467911 IFNL1Q8IU54 200 aa13.91□□□□□ -0.18
NCK1-203ENST00000467911 SGIP1Q9BQI5 828 aa13.89□□□□□ -0.19
NCK1-203ENST00000467911 IER5LQ5T953 404 aa13.85□□□□□ -0.19
NCK1-203ENST00000467911 TMEM106CQ9BVX2 250 aa13.81□□□□□ -0.2
NCK1-203ENST00000467911 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
NCK1-203ENST00000467911 FAM212AQ96EL1 285 aa13.78□□□□□ -0.2
NCK1-203ENST00000467911 FKBP8Q14318 412 aa13.77□□□□□ -0.21
NCK1-203ENST00000467911 SLAIN1Q8ND83 568 aa13.75□□□□□ -0.21
NCK1-203ENST00000467911 IRX5P78411 483 aaPredicted RBP13.73□□□□□ -0.21
NCK1-203ENST00000467911 CDAN1Q8IWY9 1227 aa13.72□□□□□ -0.21
NCK1-203ENST00000467911 ST18O60284 1047 aa13.71□□□□□ -0.21
NCK1-203ENST00000467911 PYGBP11216 843 aa13.7□□□□□ -0.22
NCK1-203ENST00000467911 PLCG2P16885 1265 aa13.7□□□□□ -0.22
NCK1-203ENST00000467911 DCAF8Q5TAQ9 597 aa13.66□□□□□ -0.22
NCK1-203ENST00000467911 PCDHB8Q9UN66 801 aa13.66□□□□□ -0.22
NCK1-203ENST00000467911 OCEL1Q9H607 264 aa13.6□□□□□ -0.23
NCK1-203ENST00000467911 PDCD7Q8N8D1 485 aaKnown RBP13.5□□□□□ -0.25
NCK1-203ENST00000467911 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.49□□□□□ -0.25
NCK1-203ENST00000467911 MARVELD3Q96A59 401 aa13.48□□□□□ -0.25
NCK1-203ENST00000467911 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
NCK1-203ENST00000467911 TMEM121BQ9BXQ6 578 aaPredicted RBP13.44□□□□□ -0.26
NCK1-203ENST00000467911 VASPP50552 380 aaPredicted RBP13.42□□□□□ -0.26
NCK1-203ENST00000467911 SPNS2Q8IVW8 549 aa13.41□□□□□ -0.26
NCK1-203ENST00000467911 KLHL34Q8N239 644 aa13.41□□□□□ -0.26
NCK1-203ENST00000467911 MMRN1Q13201 1228 aa13.4□□□□□ -0.26
NCK1-203ENST00000467911 SNPHO15079 494 aa13.39□□□□□ -0.27
NCK1-203ENST00000467911 GSE1Q14687 1217 aa13.39□□□□□ -0.27
NCK1-203ENST00000467911 ZNF467Q7Z7K2 595 aaPredicted RBP13.39□□□□□ -0.27
NCK1-203ENST00000467911 MKRN3Q13064 507 aaKnown RBP13.36□□□□□ -0.27
NCK1-203ENST00000467911 CHRM1P11229 460 aaPredicted RBP13.35□□□□□ -0.27
NCK1-203ENST00000467911 PSEN1P49768 467 aa13.35□□□□□ -0.27
NCK1-203ENST00000467911 GOLGA2Q08379 1002 aa13.34□□□□□ -0.27
NCK1-203ENST00000467911 C3orf67Q6ZVT6 689 aa13.34□□□□□ -0.27
NCK1-203ENST00000467911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.34□□□□□ -0.27
NCK1-203ENST00000467911 POTEB3A0JP26 581 aa13.33□□□□□ -0.28
NCK1-203ENST00000467911 POTEBQ6S5H4 581 aa13.33□□□□□ -0.28
NCK1-203ENST00000467911 DPY19L2Q6NUT2 758 aa13.32□□□□□ -0.28
NCK1-203ENST00000467911 L3MBTL3Q96JM7 780 aaPredicted RBP13.3□□□□□ -0.28
NCK1-203ENST00000467911 ILDR1Q86SU0 546 aaPredicted RBP13.29□□□□□ -0.28
NCK1-203ENST00000467911 EMP3P54852 163 aa13.28□□□□□ -0.28
NCK1-203ENST00000467911 KRTAP3-3Q9BYR6 98 aa13.25□□□□□ -0.29
NCK1-203ENST00000467911 KRTAP3-2Q9BYR7 98 aa13.25□□□□□ -0.29
NCK1-203ENST00000467911 HS3ST6Q96QI5 342 aa13.23□□□□□ -0.29
NCK1-203ENST00000467911 FAM205CA6NFA0 338 aa13.22□□□□□ -0.29
NCK1-203ENST00000467911 PDAP1Q13442 181 aaKnown RBP13.22□□□□□ -0.29
NCK1-203ENST00000467911 CABP2Q9NPB3 220 aa13.22□□□□□ -0.29
NCK1-203ENST00000467911 IFNLR1Q8IU57 520 aaPredicted RBP13.21□□□□□ -0.29
NCK1-203ENST00000467911 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
NCK1-203ENST00000467911 CIZ1Q9ULV3 898 aaPredicted RBP13.16□□□□□ -0.3
NCK1-203ENST00000467911 BOLA1Q9Y3E2 137 aa13.15□□□□□ -0.3
NCK1-203ENST00000467911 SPOCK2Q92563 424 aa13.14□□□□□ -0.31
NCK1-203ENST00000467911 G3V3G9 751 aa13.04□□□□□ -0.32
NCK1-203ENST00000467911 EFCAB3Q8N7B9 438 aa13.04□□□□□ -0.32
NCK1-203ENST00000467911 HOXB1P14653 301 aaPredicted RBP13.03□□□□□ -0.32
NCK1-203ENST00000467911 TMEM92Q6UXU6 159 aa12.99□□□□□ -0.33
NCK1-203ENST00000467911 ZNF710Q8N1W2 664 aa12.99□□□□□ -0.33
NCK1-203ENST00000467911 ERBB3P21860 1342 aa12.95□□□□□ -0.34
NCK1-203ENST00000467911 DOK7Q18PE1 504 aa12.95□□□□□ -0.34
NCK1-203ENST00000467911 MICALL2Q8IY33 904 aa12.92□□□□□ -0.34
NCK1-203ENST00000467911 VARS2Q5ST30 1063 aaKnown RBP12.91□□□□□ -0.34
NCK1-203ENST00000467911 MS4A4AQ96JQ5 239 aa12.9□□□□□ -0.34
NCK1-203ENST00000467911 RNF25Q96BH1 459 aaPredicted RBP12.89□□□□□ -0.35
NCK1-203ENST00000467911 GPR153Q6NV75 609 aa12.84□□□□□ -0.35
NCK1-203ENST00000467911 TRIM41Q8WV44 630 aa12.84□□□□□ -0.35
NCK1-203ENST00000467911 RIMBP2O15034 1052 aa12.83□□□□□ -0.36
NCK1-203ENST00000467911 PHF8Q9UPP1 1060 aa12.83□□□□□ -0.36
NCK1-203ENST00000467911 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.82□□□□□ -0.36
NCK1-203ENST00000467911 RNF166Q96A37 237 aaPredicted RBP12.82□□□□□ -0.36
NCK1-203ENST00000467911 ZFP91Q96JP5 570 aaPredicted RBP12.82□□□□□ -0.36
NCK1-203ENST00000467911 SOX12O15370 315 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms