RNA–Protein interactions for RNA: ENST00000466539.1

PSME4-204, Transcript of proteasome activator subunit 4, humanhuman

TSL 4

Gene PSME4, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-204ENST00000466539 CIZ1Q9ULV3 898 aaPredicted RBP12.06□□□□□ -0.48
PSME4-204ENST00000466539 DCAF8Q5TAQ9 597 aa12.04□□□□□ -0.48
PSME4-204ENST00000466539 TSPYL2Q9H2G4 693 aaPredicted RBP12.02□□□□□ -0.49
PSME4-204ENST00000466539 FAM212AQ96EL1 285 aa11.99□□□□□ -0.49
PSME4-204ENST00000466539 ABCC9O60706 1549 aa11.98□□□□□ -0.49
PSME4-204ENST00000466539 GSE1Q14687 1217 aa11.98□□□□□ -0.49
PSME4-204ENST00000466539 C19orf67A6NJJ6 358 aa11.96□□□□□ -0.49
PSME4-204ENST00000466539 ECM2O94769 699 aaPredicted RBP11.95□□□□□ -0.5
PSME4-204ENST00000466539 CD44P16070 742 aaKnown RBP11.95□□□□□ -0.5
PSME4-204ENST00000466539 EVX2Q03828 476 aa11.94□□□□□ -0.5
PSME4-204ENST00000466539 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
PSME4-204ENST00000466539 NACADO15069 1562 aa11.92□□□□□ -0.5
PSME4-204ENST00000466539 PYGBP11216 843 aa11.91□□□□□ -0.5
PSME4-204ENST00000466539 RGL2O15211 777 aa11.9□□□□□ -0.5
PSME4-204ENST00000466539 ZRANB1Q9UGI0 708 aa11.9□□□□□ -0.5
PSME4-204ENST00000466539 RNF25Q96BH1 459 aaPredicted RBP11.88□□□□□ -0.51
PSME4-204ENST00000466539 CHRM1P11229 460 aaPredicted RBP11.86□□□□□ -0.51
PSME4-204ENST00000466539 PAK3O75914 559 aaPredicted RBP11.85□□□□□ -0.51
PSME4-204ENST00000466539 PHF12Q96QT6 1004 aa11.85□□□□□ -0.51
PSME4-204ENST00000466539 TRIM41Q8WV44 630 aa11.84□□□□□ -0.51
PSME4-204ENST00000466539 KIF12Q96FN5 646 aa11.81□□□□□ -0.52
PSME4-204ENST00000466539 MAP3K13O43283 966 aa11.8□□□□□ -0.52
PSME4-204ENST00000466539 RB1CC1Q8TDY2 1594 aa11.79□□□□□ -0.52
PSME4-204ENST00000466539 ZNF579Q8NAF0 562 aaKnown RBP11.79□□□□□ -0.52
PSME4-204ENST00000466539 PCDHB8Q9UN66 801 aa11.76□□□□□ -0.53
PSME4-204ENST00000466539 PCDHB13Q9Y5F0 798 aa11.76□□□□□ -0.53
PSME4-204ENST00000466539 DCAF8L2P0C7V8 631 aa11.74□□□□□ -0.53
PSME4-204ENST00000466539 RIOK3O14730 519 aaKnown RBP11.73□□□□□ -0.53
PSME4-204ENST00000466539 CLCN6P51797 869 aa11.73□□□□□ -0.53
PSME4-204ENST00000466539 IFNL1Q8IU54 200 aa11.73□□□□□ -0.53
PSME4-204ENST00000466539 GABBR2O75899 941 aa11.7□□□□□ -0.54
PSME4-204ENST00000466539 MS4A3Q96HJ5 214 aa11.69□□□□□ -0.54
PSME4-204ENST00000466539 SGIP1Q9BQI5 828 aa11.68□□□□□ -0.54
PSME4-204ENST00000466539 TRPC6Q9Y210 931 aa11.68□□□□□ -0.54
PSME4-204ENST00000466539 GALR2O43603 387 aaPredicted RBP11.66□□□□□ -0.54
PSME4-204ENST00000466539 ZNF467Q7Z7K2 595 aaPredicted RBP11.66□□□□□ -0.54
PSME4-204ENST00000466539 UNC13AQ9UPW8 1703 aa11.64□□□□□ -0.55
PSME4-204ENST00000466539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
PSME4-204ENST00000466539 VGFO15240 615 aaPredicted RBP11.64□□□□□ -0.55
PSME4-204ENST00000466539 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
PSME4-204ENST00000466539 CHGAP10645 457 aaKnown RBP11.62□□□□□ -0.55
PSME4-204ENST00000466539 PSEN1P49768 467 aa11.6□□□□□ -0.55
PSME4-204ENST00000466539 PDAP1Q13442 181 aaKnown RBP11.59□□□□□ -0.55
PSME4-204ENST00000466539 HS6ST3Q8IZP7 471 aa11.58□□□□□ -0.56
PSME4-204ENST00000466539 STK25O00506 426 aa11.57□□□□□ -0.56
PSME4-204ENST00000466539 SCRIBQ14160 1630 aa11.57□□□□□ -0.56
PSME4-204ENST00000466539 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
PSME4-204ENST00000466539 TAOK2Q9UL54 1235 aa11.54□□□□□ -0.56
PSME4-204ENST00000466539 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
PSME4-204ENST00000466539 BICRAQ9NZM4 1560 aa11.53□□□□□ -0.56
PSME4-204ENST00000466539 BMP2KQ9NSY1 1161 aaPredicted RBP11.52□□□□□ -0.57
PSME4-204ENST00000466539 NKX1-1Q15270 411 aaPredicted RBP11.51□□□□□ -0.57
PSME4-204ENST00000466539 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
PSME4-204ENST00000466539 TTLL13PA6NNM8 815 aa11.49□□□□□ -0.57
PSME4-204ENST00000466539 TIE1P35590 1138 aa11.49□□□□□ -0.57
PSME4-204ENST00000466539 BBXQ8WY36 941 aaPredicted RBP11.49□□□□□ -0.57
PSME4-204ENST00000466539 SHROOM4Q9ULL8 1493 aa11.47□□□□□ -0.57
PSME4-204ENST00000466539 DNAJC5Q9H3Z4 198 aa11.47□□□□□ -0.57
PSME4-204ENST00000466539 CABP2Q9NPB3 220 aa11.47□□□□□ -0.57
PSME4-204ENST00000466539 POTEIP0CG38 1075 aa11.45□□□□□ -0.58
PSME4-204ENST00000466539 ATN1P54259 1190 aaPredicted RBP11.45□□□□□ -0.58
PSME4-204ENST00000466539 ATMINO43313 823 aaPredicted RBP11.44□□□□□ -0.58
PSME4-204ENST00000466539 LHX8Q68G74 356 aa11.44□□□□□ -0.58
PSME4-204ENST00000466539 EFCAB3Q8N7B9 438 aa11.44□□□□□ -0.58
PSME4-204ENST00000466539 ASTLQ6HA08 431 aaPredicted RBP11.43□□□□□ -0.58
PSME4-204ENST00000466539 PELP1Q8IZL8 1130 aaKnown RBP11.42□□□□□ -0.58
PSME4-204ENST00000466539 DCBLD2Q96PD2 775 aa11.42□□□□□ -0.58
PSME4-204ENST00000466539 TRIM35Q9UPQ4 493 aa11.41□□□□□ -0.58
PSME4-204ENST00000466539 MFRPQ9BY79 579 aa11.38□□□□□ -0.59
PSME4-204ENST00000466539 GTPBP6O43824 516 aaPredicted RBP11.37□□□□□ -0.59
PSME4-204ENST00000466539 PAXIP1Q6ZW49 1069 aaPredicted RBP11.37□□□□□ -0.59
PSME4-204ENST00000466539 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.37□□□□□ -0.59
PSME4-204ENST00000466539 PLCB2Q00722 1185 aa11.36□□□□□ -0.59
PSME4-204ENST00000466539 CFAP44Q96MT7 982 aa11.35□□□□□ -0.59
PSME4-204ENST00000466539 PHF8Q9UPP1 1060 aa11.35□□□□□ -0.59
PSME4-204ENST00000466539 FBXO22Q8NEZ5 403 aa11.33□□□□□ -0.6
PSME4-204ENST00000466539 SOX12O15370 315 aa11.32□□□□□ -0.6
PSME4-204ENST00000466539 GOLGA2Q08379 1002 aa11.32□□□□□ -0.6
PSME4-204ENST00000466539 SPRYD3Q8NCJ5 442 aa11.32□□□□□ -0.6
PSME4-204ENST00000466539 MKRN3Q13064 507 aaKnown RBP11.31□□□□□ -0.6
PSME4-204ENST00000466539 MS4A4AQ96JQ5 239 aa11.3□□□□□ -0.6
PSME4-204ENST00000466539 ILDR1Q86SU0 546 aaPredicted RBP11.29□□□□□ -0.6
PSME4-204ENST00000466539 POTEFA5A3E0 1075 aa11.27□□□□□ -0.61
PSME4-204ENST00000466539 PPP1R37O75864 691 aa11.27□□□□□ -0.61
PSME4-204ENST00000466539 IRX5P78411 483 aaPredicted RBP11.27□□□□□ -0.61
PSME4-204ENST00000466539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.611e-7■■□□□ 12.9
PSME4-204ENST00000466539 NLRP6P59044 892 aa11.25□□□□□ -0.61
PSME4-204ENST00000466539 COLQQ9Y215 455 aaPredicted RBP11.25□□□□□ -0.61
PSME4-204ENST00000466539 DPY19L2Q6NUT2 758 aa11.24□□□□□ -0.61
PSME4-204ENST00000466539 PDCD7Q8N8D1 485 aaKnown RBP11.24□□□□□ -0.61
PSME4-204ENST00000466539 CECR2Q9BXF3 1484 aa11.24□□□□□ -0.61
PSME4-204ENST00000466539 IER5LQ5T953 404 aa11.23□□□□□ -0.61
PSME4-204ENST00000466539 BAZ1AQ9NRL2 1556 aaPredicted RBP11.22□□□□□ -0.61
PSME4-204ENST00000466539 SLC39A7Q92504 469 aa11.21□□□□□ -0.61
PSME4-204ENST00000466539 TSHZ2Q9NRE2 1034 aa11.21□□□□□ -0.61
PSME4-204ENST00000466539 SMARCA4P51532 1647 aa11.2□□□□□ -0.62
PSME4-204ENST00000466539 OCEL1Q9H607 264 aa11.2□□□□□ -0.62
PSME4-204ENST00000466539 METRNQ9UJH8 293 aa11.2□□□□□ -0.62
PSME4-204ENST00000466539 PEG3Q9GZU2 1588 aa11.2□□□□□ -0.62
PSME4-204ENST00000466539 RSF1Q96T23 1441 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms