RNA–Protein interactions for RNA: ENST00000466185.1

PRPF4B-204, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,297 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-204ENST00000466185 NUBP1P53384 320 aa12.77□□□□□ -0.37
PRPF4B-204ENST00000466185 RNF25Q96BH1 459 aaPredicted RBP12.77□□□□□ -0.37
PRPF4B-204ENST00000466185 SPDYE1Q8NFV5 336 aaPredicted RBP12.72□□□□□ -0.37
PRPF4B-204ENST00000466185 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.37
PRPF4B-204ENST00000466185 TPRNQ4KMQ1 711 aa12.69□□□□□ -0.38
PRPF4B-204ENST00000466185 DCAF8Q5TAQ9 597 aa12.69□□□□□ -0.38
PRPF4B-204ENST00000466185 AKT1S1Q96B36 256 aa12.67□□□□□ -0.38
PRPF4B-204ENST00000466185 RIOK3O14730 519 aaKnown RBP12.66□□□□□ -0.38
PRPF4B-204ENST00000466185 CREBZFQ9NS37 354 aa12.66□□□□□ -0.38
PRPF4B-204ENST00000466185 MNX1P50219 401 aaPredicted RBP12.63□□□□□ -0.39
PRPF4B-204ENST00000466185 NKX1-1Q15270 411 aaPredicted RBP12.63□□□□□ -0.39
PRPF4B-204ENST00000466185 CLEC11AQ9Y240 323 aa12.63□□□□□ -0.39
PRPF4B-204ENST00000466185 FAM212AQ96EL1 285 aa12.62□□□□□ -0.39
PRPF4B-204ENST00000466185 PRR29P0C7W0 189 aa12.61□□□□□ -0.39
PRPF4B-204ENST00000466185 CHRDL2Q6WN34 429 aa12.6□□□□□ -0.39
PRPF4B-204ENST00000466185 GTPBP6O43824 516 aaPredicted RBP12.57□□□□□ -0.4
PRPF4B-204ENST00000466185 REM2Q8IYK8 340 aaPredicted RBP12.57□□□□□ -0.4
PRPF4B-204ENST00000466185 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
PRPF4B-204ENST00000466185 CHRM1P11229 460 aaPredicted RBP12.56□□□□□ -0.4
PRPF4B-204ENST00000466185 RASEFQ8IZ41 740 aa12.56□□□□□ -0.4
PRPF4B-204ENST00000466185 STK25O00506 426 aa12.55□□□□□ -0.4
PRPF4B-204ENST00000466185 NBR1Q14596 966 aa12.52□□□□□ -0.41
PRPF4B-204ENST00000466185 SGIP1Q9BQI5 828 aa12.5□□□□□ -0.41
PRPF4B-204ENST00000466185 SP7Q8TDD2 431 aaPredicted RBP12.48□□□□□ -0.41
PRPF4B-204ENST00000466185 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.46□□□□□ -0.41
PRPF4B-204ENST00000466185 ZFP91Q96JP5 570 aaPredicted RBP12.46□□□□□ -0.41
PRPF4B-204ENST00000466185 BCL11BQ9C0K0 894 aaPredicted RBP12.45□□□□□ -0.42
PRPF4B-204ENST00000466185 STK24Q9Y6E0 443 aa12.45□□□□□ -0.42
PRPF4B-204ENST00000466185 PYGBP11216 843 aa12.44□□□□□ -0.42
PRPF4B-204ENST00000466185 PITPNM1O00562 1244 aa12.42□□□□□ -0.42
PRPF4B-204ENST00000466185 RYDENQ9NUL5 291 aaKnown RBP12.38□□□□□ -0.43
PRPF4B-204ENST00000466185 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
PRPF4B-204ENST00000466185 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
PRPF4B-204ENST00000466185 TSPYL2Q9H2G4 693 aaPredicted RBP12.27□□□□□ -0.45
PRPF4B-204ENST00000466185 ZNF467Q7Z7K2 595 aaPredicted RBP12.26□□□□□ -0.45
PRPF4B-204ENST00000466185 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
PRPF4B-204ENST00000466185 PDAP1Q13442 181 aaKnown RBP12.22□□□□□ -0.45
PRPF4B-204ENST00000466185 FARP1Q9Y4F1 1045 aaPredicted RBP12.22□□□□□ -0.45
PRPF4B-204ENST00000466185 CADPS2Q86UW7 1296 aa12.19□□□□□ -0.46
PRPF4B-204ENST00000466185 PCDHB8Q9UN66 801 aa12.19□□□□□ -0.46
PRPF4B-204ENST00000466185 PCDHB13Q9Y5F0 798 aa12.19□□□□□ -0.46
PRPF4B-204ENST00000466185 P3H3Q8IVL6 736 aa12.18□□□□□ -0.46
PRPF4B-204ENST00000466185 CCDC61Q9Y6R9 512 aa12.16□□□□□ -0.46
PRPF4B-204ENST00000466185 PSEN1P49768 467 aa12.14□□□□□ -0.47
PRPF4B-204ENST00000466185 ZNF579Q8NAF0 562 aaKnown RBP12.13□□□□□ -0.47
PRPF4B-204ENST00000466185 MFRPQ9BY79 579 aa12.13□□□□□ -0.47
PRPF4B-204ENST00000466185 WDR70Q9NW82 654 aa12.13□□□□□ -0.47
PRPF4B-204ENST00000466185 HAX1O00165 279 aa12.12□□□□□ -0.47
PRPF4B-204ENST00000466185 KCNV2Q8TDN2 545 aa12.12□□□□□ -0.47
PRPF4B-204ENST00000466185 PRKAR2AP13861 404 aaKnown RBP12.11□□□□□ -0.47
PRPF4B-204ENST00000466185 IFNL1Q8IU54 200 aa12.04□□□□□ -0.48
PRPF4B-204ENST00000466185 PPP1R37O75864 691 aa12.03□□□□□ -0.48
PRPF4B-204ENST00000466185 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.01□□□□□ -0.49
PRPF4B-204ENST00000466185 EFCAB3Q8N7B9 438 aa12.01□□□□□ -0.49
PRPF4B-204ENST00000466185 FBXO22Q8NEZ5 403 aa12.01□□□□□ -0.49
PRPF4B-204ENST00000466185 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
PRPF4B-204ENST00000466185 LMOD2Q6P5Q4 547 aa12□□□□□ -0.49
PRPF4B-204ENST00000466185 MAP3K13O43283 966 aa11.99□□□□□ -0.49
PRPF4B-204ENST00000466185 NLRP6P59044 892 aa11.99□□□□□ -0.49
PRPF4B-204ENST00000466185 KIF12Q96FN5 646 aa11.99□□□□□ -0.49
PRPF4B-204ENST00000466185 CABP2Q9NPB3 220 aa11.98□□□□□ -0.49
PRPF4B-204ENST00000466185 SOX12O15370 315 aa11.97□□□□□ -0.49
PRPF4B-204ENST00000466185 PHF8Q9UPP1 1060 aa11.97□□□□□ -0.49
PRPF4B-204ENST00000466185 ARHGEF1Q92888 912 aaKnown RBP11.94□□□□□ -0.5
PRPF4B-204ENST00000466185 E2F4Q16254 413 aa11.92□□□□□ -0.5
PRPF4B-204ENST00000466185 GTF3C3Q9Y5Q9 886 aa11.92□□□□□ -0.5
PRPF4B-204ENST00000466185 TMEM132AQ24JP5 1023 aa11.9□□□□□ -0.5
PRPF4B-204ENST00000466185 TULP1O00294 542 aaPredicted RBP11.89□□□□□ -0.51
PRPF4B-204ENST00000466185 TIMELESSQ9UNS1 1208 aa11.89□□□□□ -0.51
PRPF4B-204ENST00000466185 EVX2Q03828 476 aa11.86□□□□□ -0.51
PRPF4B-204ENST00000466185 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
PRPF4B-204ENST00000466185 TESPA1A2RU30 521 aaPredicted RBP11.84□□□□□ -0.51
PRPF4B-204ENST00000466185 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
PRPF4B-204ENST00000466185 SEMA3EO15041 775 aa11.84□□□□□ -0.51
PRPF4B-204ENST00000466185 MS4A4AQ96JQ5 239 aa11.84□□□□□ -0.51
PRPF4B-204ENST00000466185 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
PRPF4B-204ENST00000466185 ZC3H15Q8WU90 426 aaKnown RBP11.82□□□□□ -0.52
PRPF4B-204ENST00000466185 PHF12Q96QT6 1004 aa11.82□□□□□ -0.52
PRPF4B-204ENST00000466185 LARP6Q9BRS8 491 aaKnown RBP11.81□□□□□ -0.52
PRPF4B-204ENST00000466185 CD44P16070 742 aaKnown RBP11.8□□□□□ -0.52
PRPF4B-204ENST00000466185 PDE4AP27815 886 aa11.8□□□□□ -0.52
PRPF4B-204ENST00000466185 MFSD10Q14728 455 aa11.8□□□□□ -0.52
PRPF4B-204ENST00000466185 CRISPLD2Q9H0B8 497 aa11.78□□□□□ -0.52
PRPF4B-204ENST00000466185 BRPF1P55201 1214 aaPredicted RBP11.76□□□□□ -0.53
PRPF4B-204ENST00000466185 TMEM106CQ9BVX2 250 aa11.76□□□□□ -0.53
PRPF4B-204ENST00000466185 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
PRPF4B-204ENST00000466185 DDX27Q96GQ7 796 aaKnown RBP11.74□□□□□ -0.53
PRPF4B-204ENST00000466185 ARIH1Q9Y4X5 557 aaPredicted RBP11.74□□□□□ -0.53
PRPF4B-204ENST00000466185 ERICH6Q7L0X2 663 aa11.72□□□□□ -0.53
PRPF4B-204ENST00000466185 TRPC6Q9Y210 931 aa11.72□□□□□ -0.53
PRPF4B-204ENST00000466185 SLC24A3Q9HC58 644 aa11.71□□□□□ -0.53
PRPF4B-204ENST00000466185 CAMK2BQ13554 666 aa11.7□□□□□ -0.54
PRPF4B-204ENST00000466185 SMYD5Q6GMV2 418 aa11.7□□□□□ -0.54
PRPF4B-204ENST00000466185 MKRN3Q13064 507 aaKnown RBP11.69□□□□□ -0.54
PRPF4B-204ENST00000466185 LHX8Q68G74 356 aa11.69□□□□□ -0.54
PRPF4B-204ENST00000466185 MS4A3Q96HJ5 214 aa11.69□□□□□ -0.54
PRPF4B-204ENST00000466185 ZMYND10O75800 440 aa11.67□□□□□ -0.54
PRPF4B-204ENST00000466185 NEUROD2Q15784 382 aa11.66□□□□□ -0.54
PRPF4B-204ENST00000466185 GABBR2O75899 941 aa11.64□□□□□ -0.55
PRPF4B-204ENST00000466185 CCDC180Q9P1Z9 1646 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms