RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 FAM163AQ96GL9 167 aaPredicted RBP8.85□□□□□ -0.99
CCDC93-205ENST00000466171 ATMINO43313 823 aaPredicted RBP8.84□□□□□ -0.99
CCDC93-205ENST00000466171 PAK3O75914 559 aaPredicted RBP8.84□□□□□ -0.99
CCDC93-205ENST00000466171 SLC39A7Q92504 469 aa8.84□□□□□ -0.99
CCDC93-205ENST00000466171 MAMSTRQ6ZN01 415 aa8.83□□□□□ -1
CCDC93-205ENST00000466171 MS4A3Q96HJ5 214 aa8.83□□□□□ -1
CCDC93-205ENST00000466171 C7P10643 843 aa8.82□□□□□ -1
CCDC93-205ENST00000466171 SCUBE2Q9NQ36 999 aa8.78□□□□□ -1
CCDC93-205ENST00000466171 MNX1P50219 401 aaPredicted RBP8.76□□□□□ -1.01
CCDC93-205ENST00000466171 POTEFA5A3E0 1075 aa8.75□□□□□ -1.01
CCDC93-205ENST00000466171 CDAN1Q8IWY9 1227 aa8.75□□□□□ -1.01
CCDC93-205ENST00000466171 ATN1P54259 1190 aaPredicted RBP8.73□□□□□ -1.01
CCDC93-205ENST00000466171 NPM1P06748 294 aaKnown RBP eCLIP8.72□□□□□ -1.01
CCDC93-205ENST00000466171 PROM2Q8N271 834 aa8.66□□□□□ -1.02
CCDC93-205ENST00000466171 PLEKHG5O94827 1062 aa8.64□□□□□ -1.03
CCDC93-205ENST00000466171 BMP2KQ9NSY1 1161 aaPredicted RBP8.63□□□□□ -1.03
CCDC93-205ENST00000466171 TRPC6Q9Y210 931 aa8.63□□□□□ -1.03
CCDC93-205ENST00000466171 MMRN1Q13201 1228 aa8.61□□□□□ -1.03
CCDC93-205ENST00000466171 COLQQ9Y215 455 aaPredicted RBP8.6□□□□□ -1.03
CCDC93-205ENST00000466171 CCDC61Q9Y6R9 512 aa8.6□□□□□ -1.03
CCDC93-205ENST00000466171 ST18O60284 1047 aa8.58□□□□□ -1.04
CCDC93-205ENST00000466171 SPNS2Q8IVW8 549 aa8.57□□□□□ -1.04
CCDC93-205ENST00000466171 KIF12Q96FN5 646 aa8.57□□□□□ -1.04
CCDC93-205ENST00000466171 TSPYL2Q9H2G4 693 aaPredicted RBP8.57□□□□□ -1.04
CCDC93-205ENST00000466171 MIER1Q8N108 512 aa8.56□□□□□ -1.04
CCDC93-205ENST00000466171 TIE1P35590 1138 aa8.53□□□□□ -1.04
CCDC93-205ENST00000466171 FKBP8Q14318 412 aa8.52□□□□□ -1.05
CCDC93-205ENST00000466171 PLCD3Q8N3E9 789 aa8.51□□□□□ -1.05
CCDC93-205ENST00000466171 TTLL13PA6NNM8 815 aa8.5□□□□□ -1.05
CCDC93-205ENST00000466171 SEC24BO95487 1268 aa8.5□□□□□ -1.05
CCDC93-205ENST00000466171 MAP3K13O43283 966 aa8.49□□□□□ -1.05
CCDC93-205ENST00000466171 SLAIN1Q8ND83 568 aa8.49□□□□□ -1.05
CCDC93-205ENST00000466171 ZBTB47Q9UFB7 747 aaPredicted RBP8.49□□□□□ -1.05
CCDC93-205ENST00000466171 TRIM35Q9UPQ4 493 aa8.44□□□□□ -1.06
CCDC93-205ENST00000466171 IER5LQ5T953 404 aa8.43□□□□□ -1.06
CCDC93-205ENST00000466171 FBXO3Q9UK99 471 aa8.42□□□□□ -1.06
CCDC93-205ENST00000466171 TMEM121BQ9BXQ6 578 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-205ENST00000466171 RASEFQ8IZ41 740 aa8.38□□□□□ -1.07
CCDC93-205ENST00000466171 MARVELD3Q96A59 401 aa8.38□□□□□ -1.07
CCDC93-205ENST00000466171 FAM212AQ96EL1 285 aa8.34□□□□□ -1.07
CCDC93-205ENST00000466171 NUBP1P53384 320 aa8.32□□□□□ -1.08
CCDC93-205ENST00000466171 KRTAP3-3Q9BYR6 98 aa8.32□□□□□ -1.08
CCDC93-205ENST00000466171 KRTAP3-2Q9BYR7 98 aa8.32□□□□□ -1.08
CCDC93-205ENST00000466171 PLCG2P16885 1265 aa8.31□□□□□ -1.08
CCDC93-205ENST00000466171 IRX5P78411 483 aaPredicted RBP8.31□□□□□ -1.08
CCDC93-205ENST00000466171 SGIP1Q9BQI5 828 aa8.31□□□□□ -1.08
CCDC93-205ENST00000466171 PCDHB13Q9Y5F0 798 aa8.3□□□□□ -1.08
CCDC93-205ENST00000466171 POTEB3A0JP26 581 aa8.27□□□□□ -1.09
CCDC93-205ENST00000466171 DCAF8Q5TAQ9 597 aa8.27□□□□□ -1.09
CCDC93-205ENST00000466171 POTEBQ6S5H4 581 aa8.27□□□□□ -1.09
CCDC93-205ENST00000466171 IFNL1Q8IU54 200 aa8.27□□□□□ -1.09
CCDC93-205ENST00000466171 SNPHO15079 494 aa8.26□□□□□ -1.09
CCDC93-205ENST00000466171 KLHL34Q8N239 644 aa8.26□□□□□ -1.09
CCDC93-205ENST00000466171 TMEM106CQ9BVX2 250 aa8.26□□□□□ -1.09
CCDC93-205ENST00000466171 EMP3P54852 163 aa8.25□□□□□ -1.09
CCDC93-205ENST00000466171 VASPP50552 380 aaPredicted RBP8.24□□□□□ -1.09
CCDC93-205ENST00000466171 HS3ST6Q96QI5 342 aa8.23□□□□□ -1.09
CCDC93-205ENST00000466171 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.21□□□□□ -1.1
CCDC93-205ENST00000466171 GSE1Q14687 1217 aa8.2□□□□□ -1.1
CCDC93-205ENST00000466171 OCEL1Q9H607 264 aa8.19□□□□□ -1.1
CCDC93-205ENST00000466171 FAM205CA6NFA0 338 aa8.18□□□□□ -1.1
CCDC93-205ENST00000466171 PYGBP11216 843 aa8.18□□□□□ -1.1
CCDC93-205ENST00000466171 ZNF467Q7Z7K2 595 aaPredicted RBP8.12□□□□□ -1.11
CCDC93-205ENST00000466171 PDCD7Q8N8D1 485 aaKnown RBP8.11□□□□□ -1.11
CCDC93-205ENST00000466171 SPOCK2Q92563 424 aa8.1□□□□□ -1.11
CCDC93-205ENST00000466171 C3orf67Q6ZVT6 689 aa8.09□□□□□ -1.11
CCDC93-205ENST00000466171 RNF166Q96A37 237 aaPredicted RBP8.09□□□□□ -1.11
CCDC93-205ENST00000466171 PCDHB8Q9UN66 801 aa8.09□□□□□ -1.11
CCDC93-205ENST00000466171 CHRM1P11229 460 aaPredicted RBP8.07□□□□□ -1.12
CCDC93-205ENST00000466171 GOLGA2Q08379 1002 aa8.07□□□□□ -1.12
CCDC93-205ENST00000466171 CIZ1Q9ULV3 898 aaPredicted RBP8.07□□□□□ -1.12
CCDC93-205ENST00000466171 IFNLR1Q8IU57 520 aaPredicted RBP8.05□□□□□ -1.12
CCDC93-205ENST00000466171 MKRN3Q13064 507 aaKnown RBP8.03□□□□□ -1.12
CCDC93-205ENST00000466171 HOXB3P14651 431 aaPredicted RBP8.01□□□□□ -1.13
CCDC93-205ENST00000466171 PSEN1P49768 467 aa8□□□□□ -1.13
CCDC93-205ENST00000466171 PDAP1Q13442 181 aaKnown RBP7.99□□□□□ -1.13
CCDC93-205ENST00000466171 TRIM41Q8WV44 630 aa7.99□□□□□ -1.13
CCDC93-205ENST00000466171 L3MBTL3Q96JM7 780 aaPredicted RBP7.98□□□□□ -1.13
CCDC93-205ENST00000466171 MYT1LQ9UL68 1186 aa7.98□□□□□ -1.13
CCDC93-205ENST00000466171 HOXB1P14653 301 aaPredicted RBP7.95□□□□□ -1.14
CCDC93-205ENST00000466171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.94□□□□□ -1.143e-6■■□□□ 11.5
CCDC93-205ENST00000466171 ERBB3P21860 1342 aa7.93□□□□□ -1.14
CCDC93-205ENST00000466171 G3V3G9 751 aa7.91□□□□□ -1.14
CCDC93-205ENST00000466171 CABP2Q9NPB3 220 aa7.91□□□□□ -1.14
CCDC93-205ENST00000466171 VARS2Q5ST30 1063 aaKnown RBP7.9□□□□□ -1.14
CCDC93-205ENST00000466171 ILDR1Q86SU0 546 aaPredicted RBP7.9□□□□□ -1.14
CCDC93-205ENST00000466171 DPY19L2Q6NUT2 758 aa7.89□□□□□ -1.15
CCDC93-205ENST00000466171 ZNF710Q8N1W2 664 aa7.88□□□□□ -1.15
CCDC93-205ENST00000466171 DOK7Q18PE1 504 aa7.84□□□□□ -1.15
CCDC93-205ENST00000466171 RIOK3O14730 519 aaKnown RBP7.83□□□□□ -1.16
CCDC93-205ENST00000466171 PTGER2P43116 358 aa7.83□□□□□ -1.16
CCDC93-205ENST00000466171 ZNF687Q8N1G0 1237 aa7.83□□□□□ -1.16
CCDC93-205ENST00000466171 TAOK2Q9UL54 1235 aa7.83□□□□□ -1.16
CCDC93-205ENST00000466171 BOLA1Q9Y3E2 137 aa7.83□□□□□ -1.16
CCDC93-205ENST00000466171 VGFO15240 615 aaPredicted RBP7.81□□□□□ -1.16
CCDC93-205ENST00000466171 EFCAB3Q8N7B9 438 aa7.8□□□□□ -1.16
CCDC93-205ENST00000466171 RIMBP2O15034 1052 aa7.77□□□□□ -1.17
CCDC93-205ENST00000466171 SOX12O15370 315 aa7.77□□□□□ -1.17
CCDC93-205ENST00000466171 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.76□□□□□ -1.17
CCDC93-205ENST00000466171 ZFP91Q96JP5 570 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms