RNA–Protein interactions for RNA: ENST00000465768.1

SAMM50-202, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 169 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-202ENST00000465768 ZBTB47Q9UFB7 747 aaPredicted RBP10.55□□□□□ -0.72
SAMM50-202ENST00000465768 PLCD3Q8N3E9 789 aa10.54□□□□□ -0.72
SAMM50-202ENST00000465768 SLC39A7Q92504 469 aa10.54□□□□□ -0.72
SAMM50-202ENST00000465768 ATMINO43313 823 aaPredicted RBP10.53□□□□□ -0.72
SAMM50-202ENST00000465768 PELP1Q8IZL8 1130 aaKnown RBP10.52□□□□□ -0.73
SAMM50-202ENST00000465768 KIF12Q96FN5 646 aa10.52□□□□□ -0.73
SAMM50-202ENST00000465768 METRNQ9UJH8 293 aa10.52□□□□□ -0.73
SAMM50-202ENST00000465768 C7P10643 843 aa10.51□□□□□ -0.73
SAMM50-202ENST00000465768 RASEFQ8IZ41 740 aa10.51□□□□□ -0.73
SAMM50-202ENST00000465768 OTUD5Q96G74 571 aa10.49□□□□□ -0.73
SAMM50-202ENST00000465768 POTEB2H3BUK9 544 aa10.48□□□□□ -0.73
SAMM50-202ENST00000465768 TIE1P35590 1138 aa10.45□□□□□ -0.74
SAMM50-202ENST00000465768 MAP3K13O43283 966 aa10.44□□□□□ -0.74
SAMM50-202ENST00000465768 ATN1P54259 1190 aaPredicted RBP10.43□□□□□ -0.74
SAMM50-202ENST00000465768 BMP2KQ9NSY1 1161 aaPredicted RBP10.43□□□□□ -0.74
SAMM50-202ENST00000465768 SGIP1Q9BQI5 828 aa10.42□□□□□ -0.74
SAMM50-202ENST00000465768 MAMSTRQ6ZN01 415 aa10.41□□□□□ -0.74
SAMM50-202ENST00000465768 NUBP1P53384 320 aa10.4□□□□□ -0.74
SAMM50-202ENST00000465768 FAM212AQ96EL1 285 aa10.4□□□□□ -0.74
SAMM50-202ENST00000465768 FBXO3Q9UK99 471 aa10.38□□□□□ -0.75
SAMM50-202ENST00000465768 TRPC6Q9Y210 931 aa10.37□□□□□ -0.75
SAMM50-202ENST00000465768 PCDHB13Q9Y5F0 798 aa10.36□□□□□ -0.75
SAMM50-202ENST00000465768 TTLL13PA6NNM8 815 aa10.35□□□□□ -0.75
SAMM50-202ENST00000465768 SCUBE2Q9NQ36 999 aa10.35□□□□□ -0.75
SAMM50-202ENST00000465768 AMER1Q5JTC6 1135 aaPredicted RBP10.34□□□□□ -0.75
SAMM50-202ENST00000465768 POTEJP0CG39 1038 aa10.32□□□□□ -0.76
SAMM50-202ENST00000465768 IER5LQ5T953 404 aa10.31□□□□□ -0.76
SAMM50-202ENST00000465768 TRIM35Q9UPQ4 493 aa10.29□□□□□ -0.76
SAMM50-202ENST00000465768 POTEFA5A3E0 1075 aa10.28□□□□□ -0.76
SAMM50-202ENST00000465768 SEC24BO95487 1268 aa10.28□□□□□ -0.76
SAMM50-202ENST00000465768 RTN4Q9NQC3 1192 aaKnown RBP10.28□□□□□ -0.76
SAMM50-202ENST00000465768 IFNL1Q8IU54 200 aa10.27□□□□□ -0.77
SAMM50-202ENST00000465768 POTEMA6NI47 508 aa10.26□□□□□ -0.77
SAMM50-202ENST00000465768 POTEGQ6S5H5 508 aa10.23□□□□□ -0.77
SAMM50-202ENST00000465768 TMEM106CQ9BVX2 250 aa10.23□□□□□ -0.77
SAMM50-202ENST00000465768 VASPP50552 380 aaPredicted RBP10.22□□□□□ -0.77
SAMM50-202ENST00000465768 DCAF8Q5TAQ9 597 aa10.22□□□□□ -0.77
SAMM50-202ENST00000465768 COLQQ9Y215 455 aaPredicted RBP10.22□□□□□ -0.77
SAMM50-202ENST00000465768 PLSCR2Q9NRY7 297 aa10.2□□□□□ -0.78
SAMM50-202ENST00000465768 PYGBP11216 843 aa10.18□□□□□ -0.78
SAMM50-202ENST00000465768 PLCG2P16885 1265 aa10.17□□□□□ -0.78
SAMM50-202ENST00000465768 GSE1Q14687 1217 aa10.17□□□□□ -0.78
SAMM50-202ENST00000465768 PCDH10Q9P2E7 1040 aa10.17□□□□□ -0.78
SAMM50-202ENST00000465768 KLHL34Q8N239 644 aa10.16□□□□□ -0.78
SAMM50-202ENST00000465768 IRX5P78411 483 aaPredicted RBP10.12□□□□□ -0.79
SAMM50-202ENST00000465768 LCE2DQ5TA82 110 aaPredicted RBP10.12□□□□□ -0.79
SAMM50-202ENST00000465768 ZNF467Q7Z7K2 595 aaPredicted RBP10.12□□□□□ -0.79
SAMM50-202ENST00000465768 FAM163AQ96GL9 167 aaPredicted RBP10.11□□□□□ -0.79
SAMM50-202ENST00000465768 PCDHB8Q9UN66 801 aa10.1□□□□□ -0.79
SAMM50-202ENST00000465768 OCEL1Q9H607 264 aa10.08□□□□□ -0.8
SAMM50-202ENST00000465768 CHRM1P11229 460 aaPredicted RBP10.07□□□□□ -0.8
SAMM50-202ENST00000465768 SLAIN1Q8ND83 568 aa10.07□□□□□ -0.8
SAMM50-202ENST00000465768 IFNLR1Q8IU57 520 aaPredicted RBP10.05□□□□□ -0.8
SAMM50-202ENST00000465768 GOLGA2Q08379 1002 aa10.03□□□□□ -0.8
SAMM50-202ENST00000465768 SPOCK2Q92563 424 aa10.01□□□□□ -0.81
SAMM50-202ENST00000465768 MKRN3Q13064 507 aaKnown RBP10□□□□□ -0.81
SAMM50-202ENST00000465768 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.99□□□□□ -0.81
SAMM50-202ENST00000465768 PSEN1P49768 467 aa9.97□□□□□ -0.81
SAMM50-202ENST00000465768 PDCD7Q8N8D1 485 aaKnown RBP9.97□□□□□ -0.81
SAMM50-202ENST00000465768 PDAP1Q13442 181 aaKnown RBP9.96□□□□□ -0.82
SAMM50-202ENST00000465768 SNPHO15079 494 aa9.95□□□□□ -0.82
SAMM50-202ENST00000465768 ST18O60284 1047 aa9.94□□□□□ -0.82
SAMM50-202ENST00000465768 C3orf67Q6ZVT6 689 aa9.94□□□□□ -0.82
SAMM50-202ENST00000465768 L3MBTL3Q96JM7 780 aaPredicted RBP9.94□□□□□ -0.82
SAMM50-202ENST00000465768 CIZ1Q9ULV3 898 aaPredicted RBP9.94□□□□□ -0.82
SAMM50-202ENST00000465768 TMEM121BQ9BXQ6 578 aaPredicted RBP9.93□□□□□ -0.82
SAMM50-202ENST00000465768 TRIM41Q8WV44 630 aa9.91□□□□□ -0.82
SAMM50-202ENST00000465768 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.91□□□□□ -0.82
SAMM50-202ENST00000465768 CDAN1Q8IWY9 1227 aa9.9□□□□□ -0.82
SAMM50-202ENST00000465768 ILDR1Q86SU0 546 aaPredicted RBP9.88□□□□□ -0.83
SAMM50-202ENST00000465768 CABP2Q9NPB3 220 aa9.85□□□□□ -0.83
SAMM50-202ENST00000465768 PKD2Q13563 968 aa9.83□□□□□ -0.84
SAMM50-202ENST00000465768 G3V3G9 751 aa9.82□□□□□ -0.84
SAMM50-202ENST00000465768 BOLA1Q9Y3E2 137 aa9.79□□□□□ -0.84
SAMM50-202ENST00000465768 SLC24A1O60721 1099 aa9.76□□□□□ -0.85
SAMM50-202ENST00000465768 MARVELD3Q96A59 401 aa9.75□□□□□ -0.85
SAMM50-202ENST00000465768 EMP3P54852 163 aa9.74□□□□□ -0.85
SAMM50-202ENST00000465768 DPY19L2Q6NUT2 758 aa9.74□□□□□ -0.85
SAMM50-202ENST00000465768 RIOK3O14730 519 aaKnown RBP9.72□□□□□ -0.85
SAMM50-202ENST00000465768 EFCAB3Q8N7B9 438 aa9.71□□□□□ -0.86
SAMM50-202ENST00000465768 ECM2O94769 699 aaPredicted RBP9.7□□□□□ -0.86
SAMM50-202ENST00000465768 VGFO15240 615 aaPredicted RBP9.68□□□□□ -0.86
SAMM50-202ENST00000465768 SOX12O15370 315 aa9.67□□□□□ -0.86
SAMM50-202ENST00000465768 DOK7Q18PE1 504 aa9.66□□□□□ -0.86
SAMM50-202ENST00000465768 RNF25Q96BH1 459 aaPredicted RBP9.66□□□□□ -0.86
SAMM50-202ENST00000465768 HS3ST6Q96QI5 342 aa9.66□□□□□ -0.86
SAMM50-202ENST00000465768 SPNS2Q8IVW8 549 aa9.65□□□□□ -0.86
SAMM50-202ENST00000465768 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.64□□□□□ -0.87
SAMM50-202ENST00000465768 DCAF8L2P0C7V8 631 aa9.64□□□□□ -0.87
SAMM50-202ENST00000465768 HOXB3P14651 431 aaPredicted RBP9.64□□□□□ -0.87
SAMM50-202ENST00000465768 MMRN1Q13201 1228 aa9.64□□□□□ -0.87
SAMM50-202ENST00000465768 ZNF710Q8N1W2 664 aa9.64□□□□□ -0.87
SAMM50-202ENST00000465768 ZFP91Q96JP5 570 aaPredicted RBP9.64□□□□□ -0.87
SAMM50-202ENST00000465768 TAOK2Q9UL54 1235 aa9.64□□□□□ -0.87
SAMM50-202ENST00000465768 FAM205CA6NFA0 338 aa9.63□□□□□ -0.87
SAMM50-202ENST00000465768 MICALL2Q8IY33 904 aa9.63□□□□□ -0.87
SAMM50-202ENST00000465768 RIMBP2O15034 1052 aa9.62□□□□□ -0.87
SAMM50-202ENST00000465768 HOXB1P14653 301 aaPredicted RBP9.61□□□□□ -0.87
SAMM50-202ENST00000465768 RGL2O15211 777 aa9.6□□□□□ -0.87
SAMM50-202ENST00000465768 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms