RNA–Protein interactions for RNA: ENST00000465301.2

RTL9-201, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL9, Length 5,426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-201ENST00000465301 NPHP1O15259 732 aa10.78□□□□□ -0.68
RTL9-201ENST00000465301 TNNT2P45379 298 aaPredicted RBP10.78□□□□□ -0.68
RTL9-201ENST00000465301 TRIM44Q96DX7 344 aaPredicted RBP10.78□□□□□ -0.68
RTL9-201ENST00000465301 CHMP4BQ9H444 224 aaKnown RBP10.77□□□□□ -0.68
RTL9-201ENST00000465301 EIF4G2P78344 907 aaKnown RBP eCLIP10.76□□□□□ -0.69
RTL9-201ENST00000465301 CHMP7Q8WUX9 453 aaPredicted RBP10.76□□□□□ -0.69
RTL9-201ENST00000465301 SALL2Q9Y467 1007 aaPredicted RBP10.75□□□□□ -0.69
RTL9-201ENST00000465301 ARXQ96QS3 562 aa10.74□□□□□ -0.69
RTL9-201ENST00000465301 MRS2Q9HD23 443 aa10.73□□□□□ -0.69
RTL9-201ENST00000465301 ARID4BQ4LE39 1312 aaPredicted RBP10.73□□□□□ -0.69
RTL9-201ENST00000465301 NRDCO43847 1150 aa10.73□□□□□ -0.69
RTL9-201ENST00000465301 MTUS2Q5JR59 1369 aa10.73□□□□□ -0.69
RTL9-201ENST00000465301 KDM2AQ9Y2K7 1162 aa10.72□□□□□ -0.69
RTL9-201ENST00000465301 PTMAP06454 111 aaKnown RBP10.72□□□□□ -0.69
RTL9-201ENST00000465301 L1TD1Q5T7N2 865 aaKnown RBP10.71□□□□□ -0.7
RTL9-201ENST00000465301 CHIC2Q9UKJ5 165 aa10.7□□□□□ -0.7
RTL9-201ENST00000465301 GOLGA2Q08379 1002 aa10.7□□□□□ -0.7
RTL9-201ENST00000465301 PNNQ9H307 717 aaKnown RBP10.7□□□□□ -0.7
RTL9-201ENST00000465301 NUDCQ9Y266 331 aa10.7□□□□□ -0.7
RTL9-201ENST00000465301 DDX10Q13206 875 aaKnown RBP10.69□□□□□ -0.7
RTL9-201ENST00000465301 TULP1O00294 542 aaPredicted RBP10.69□□□□□ -0.7
RTL9-201ENST00000465301 RSF1Q96T23 1441 aaPredicted RBP10.68□□□□□ -0.7
RTL9-201ENST00000465301 MS4A1P11836 297 aa10.68□□□□□ -0.7
RTL9-201ENST00000465301 MAPK8IP3Q9UPT6 1336 aa10.68□□□□□ -0.7
RTL9-201ENST00000465301 PLEKHD1A6NEE1 506 aa10.67□□□□□ -0.7
RTL9-201ENST00000465301 HDGFP51858 240 aaKnown RBP10.67□□□□□ -0.7
RTL9-201ENST00000465301 FTSJ3Q8IY81 847 aaKnown RBP10.67□□□□□ -0.7
RTL9-201ENST00000465301 PLEKHG5O94827 1062 aa10.66□□□□□ -0.7
RTL9-201ENST00000465301 KNSTRNQ9Y448 316 aa10.65□□□□□ -0.7
RTL9-201ENST00000465301 FGD1P98174 961 aa10.64□□□□□ -0.71
RTL9-201ENST00000465301 DNTTIP2Q5QJE6 756 aaKnown RBP10.64□□□□□ -0.71
RTL9-201ENST00000465301 OS9Q13438 667 aaPredicted RBP10.63□□□□□ -0.71
RTL9-201ENST00000465301 CFAP44Q96MT7 982 aa10.63□□□□□ -0.71
RTL9-201ENST00000465301 NBR1Q14596 966 aa10.63□□□□□ -0.71
RTL9-201ENST00000465301 POGKQ9P215 609 aa10.61□□□□□ -0.71
RTL9-201ENST00000465301 CLSTN1O94985 981 aa10.6□□□□□ -0.71
RTL9-201ENST00000465301 LMOD2Q6P5Q4 547 aa10.6□□□□□ -0.71
RTL9-201ENST00000465301 KCNH8Q96L42 1107 aa10.6□□□□□ -0.71
RTL9-201ENST00000465301 KCNJ4P48050 445 aa10.6□□□□□ -0.71
RTL9-201ENST00000465301 TMX4Q9H1E5 349 aaPredicted RBP10.59□□□□□ -0.71
RTL9-201ENST00000465301 TRHP20396 242 aaPredicted RBP10.59□□□□□ -0.71
RTL9-201ENST00000465301 PPM1GO15355 546 aaPredicted RBP10.59□□□□□ -0.71
RTL9-201ENST00000465301 SCRIBQ14160 1630 aa10.58□□□□□ -0.72
RTL9-201ENST00000465301 CHAF1AQ13111 956 aaPredicted RBP10.58□□□□□ -0.72
RTL9-201ENST00000465301 GOLGA6L4A6NEF3 574 aa10.57□□□□□ -0.72
RTL9-201ENST00000465301 MCCP23508 829 aa10.57□□□□□ -0.72
RTL9-201ENST00000465301 KIAA2012Q0VF49 1180 aa10.57□□□□□ -0.72
RTL9-201ENST00000465301 ERICH6BQ5W0A0 696 aa10.56□□□□□ -0.72
RTL9-201ENST00000465301 LAS1LQ9Y4W2 734 aaKnown RBP10.55□□□□□ -0.72
RTL9-201ENST00000465301 CHMP4AQ9BY43 222 aa10.55□□□□□ -0.72
RTL9-201ENST00000465301 KANK1Q14678 1352 aa10.55□□□□□ -0.72
RTL9-201ENST00000465301 NAP1L2Q9ULW6 460 aaPredicted RBP10.54□□□□□ -0.72
RTL9-201ENST00000465301 HSP90AB1P08238 724 aaKnown RBP10.53□□□□□ -0.72
RTL9-201ENST00000465301 ISY1Q9ULR0 285 aaKnown RBP10.52□□□□□ -0.72
RTL9-201ENST00000465301 AEBP2Q6ZN18 517 aaPredicted RBP10.52□□□□□ -0.73
RTL9-201ENST00000465301 CFDP1Q9UEE9 299 aaPredicted RBP10.52□□□□□ -0.73
RTL9-201ENST00000465301 RRP7BPQ9NSQ0 103 aa10.51□□□□□ -0.73
RTL9-201ENST00000465301 RGL3Q3MIN7 710 aa10.51□□□□□ -0.73
RTL9-201ENST00000465301 PLCB2Q00722 1185 aa10.51□□□□□ -0.73
RTL9-201ENST00000465301 GNL2Q13823 731 aaKnown RBP10.51□□□□□ -0.73
RTL9-201ENST00000465301 CARD11Q9BXL7 1154 aa10.51□□□□□ -0.73
RTL9-201ENST00000465301 NCBP3Q53F19 620 aaKnown RBP10.5□□□□□ -0.73
RTL9-201ENST00000465301 HTATSF1O43719 755 aaKnown RBP10.5□□□□□ -0.73
RTL9-201ENST00000465301 CCDC34Q96HJ3 373 aa10.49□□□□□ -0.73
RTL9-201ENST00000465301 PTMSP20962 102 aa10.48□□□□□ -0.73
RTL9-201ENST00000465301 SENP3Q9H4L4 574 aaPredicted RBP10.48□□□□□ -0.73
RTL9-201ENST00000465301 RTF1Q92541 710 aaKnown RBP10.48□□□□□ -0.73
RTL9-201ENST00000465301 CLIP1P30622 1438 aa10.48□□□□□ -0.73
RTL9-201ENST00000465301 TPRNQ4KMQ1 711 aa10.48□□□□□ -0.73
RTL9-201ENST00000465301 HDAC5Q9UQL6 1122 aa10.47□□□□□ -0.73
RTL9-201ENST00000465301 HSCBQ8IWL3 235 aa10.47□□□□□ -0.73
RTL9-201ENST00000465301 TAOK2Q9UL54 1235 aa10.47□□□□□ -0.73
RTL9-201ENST00000465301 EEA1Q15075 1411 aa10.47□□□□□ -0.73
RTL9-201ENST00000465301 CALD1Q05682 793 aaKnown RBP10.46□□□□□ -0.73
RTL9-201ENST00000465301 U2SURPO15042 1029 aaKnown RBP10.46□□□□□ -0.74
RTL9-201ENST00000465301 PRM3Q9NNZ6 103 aa10.46□□□□□ -0.74
RTL9-201ENST00000465301 USP35Q9P2H5 1018 aa10.46□□□□□ -0.74
RTL9-201ENST00000465301 DCAF1Q9Y4B6 1507 aa10.45□□□□□ -0.74
RTL9-201ENST00000465301 NOC3LQ8WTT2 800 aaKnown RBP10.45□□□□□ -0.74
RTL9-201ENST00000465301 NEUROD2Q15784 382 aa10.45□□□□□ -0.74
RTL9-201ENST00000465301 TMF1P82094 1093 aa10.44□□□□□ -0.74
RTL9-201ENST00000465301 TPM4P67936 248 aa10.44□□□□□ -0.74
RTL9-201ENST00000465301 KIAA1211Q6ZU35 1233 aa10.44□□□□□ -0.74
RTL9-201ENST00000465301 FRAT1Q92837 279 aaPredicted RBP10.44□□□□□ -0.74
RTL9-201ENST00000465301 DRC7Q8IY82 874 aa10.44□□□□□ -0.74
RTL9-201ENST00000465301 NAP1L5Q96NT1 182 aaPredicted RBP10.44□□□□□ -0.74
RTL9-201ENST00000465301 IRX6P78412 446 aaPredicted RBP10.43□□□□□ -0.74
RTL9-201ENST00000465301 HDGFL2Q7Z4V5 671 aaPredicted RBP10.42□□□□□ -0.74
RTL9-201ENST00000465301 IPO8O15397 1037 aaKnown RBP10.42□□□□□ -0.74
RTL9-201ENST00000465301 ERCC6Q03468 1493 aa10.42□□□□□ -0.74
RTL9-201ENST00000465301 MSNP26038 577 aaKnown RBP10.41□□□□□ -0.74
RTL9-201ENST00000465301 ZCCHC6Q5VYS8 1495 aaKnown RBP10.41□□□□□ -0.74
RTL9-201ENST00000465301 G3V3G9 751 aa10.41□□□□□ -0.74
RTL9-201ENST00000465301 DCAF8Q5TAQ9 597 aa10.41□□□□□ -0.74
RTL9-201ENST00000465301 GOLGA3Q08378 1498 aa10.4□□□□□ -0.74
RTL9-201ENST00000465301 CSB-PGBD3P0DP91 1061 aa10.4□□□□□ -0.74
RTL9-201ENST00000465301 SRPK2P78362 688 aaKnown RBP10.4□□□□□ -0.74
RTL9-201ENST00000465301 GPATCH3Q96I76 525 aa10.4□□□□□ -0.74
RTL9-201ENST00000465301 PPP4R2Q9NY27 417 aa10.39□□□□□ -0.75
RTL9-201ENST00000465301 CEP89Q96ST8 783 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms