RNA–Protein interactions for RNA: ENST00000464846.5

GPD2-209, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 3

Gene GPD2, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-209ENST00000464846 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
GPD2-209ENST00000464846 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
GPD2-209ENST00000464846 FAM163AQ96GL9 167 aaPredicted RBP12.45□□□□□ -0.42
GPD2-209ENST00000464846 C7P10643 843 aa12.44□□□□□ -0.42
GPD2-209ENST00000464846 ATN1P54259 1190 aaPredicted RBP12.44□□□□□ -0.42
GPD2-209ENST00000464846 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
GPD2-209ENST00000464846 TRPC6Q9Y210 931 aa12.43□□□□□ -0.42
GPD2-209ENST00000464846 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
GPD2-209ENST00000464846 BMP2KQ9NSY1 1161 aaPredicted RBP12.33□□□□□ -0.44
GPD2-209ENST00000464846 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
GPD2-209ENST00000464846 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
GPD2-209ENST00000464846 MAMSTRQ6ZN01 415 aa12.32□□□□□ -0.44
GPD2-209ENST00000464846 CSRNP3Q8WYN3 585 aa12.3□□□□□ -0.44
GPD2-209ENST00000464846 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
GPD2-209ENST00000464846 COLQQ9Y215 455 aaPredicted RBP12.29□□□□□ -0.44
GPD2-209ENST00000464846 SCUBE2Q9NQ36 999 aa12.28□□□□□ -0.44
GPD2-209ENST00000464846 KIF12Q96FN5 646 aa12.27□□□□□ -0.45
GPD2-209ENST00000464846 CDAN1Q8IWY9 1227 aa12.25□□□□□ -0.45
GPD2-209ENST00000464846 MAP3K13O43283 966 aa12.18□□□□□ -0.46
GPD2-209ENST00000464846 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
GPD2-209ENST00000464846 ST18O60284 1047 aa12.12□□□□□ -0.47
GPD2-209ENST00000464846 TIE1P35590 1138 aa12.11□□□□□ -0.47
GPD2-209ENST00000464846 RASEFQ8IZ41 740 aa12.11□□□□□ -0.47
GPD2-209ENST00000464846 PROM2Q8N271 834 aa12.07□□□□□ -0.48
GPD2-209ENST00000464846 MMRN1Q13201 1228 aa12.04□□□□□ -0.48
GPD2-209ENST00000464846 TRIM35Q9UPQ4 493 aa12.03□□□□□ -0.48
GPD2-209ENST00000464846 SEC24BO95487 1268 aa12.01□□□□□ -0.49
GPD2-209ENST00000464846 SPNS2Q8IVW8 549 aa12.01□□□□□ -0.49
GPD2-209ENST00000464846 SLAIN1Q8ND83 568 aa12□□□□□ -0.49
GPD2-209ENST00000464846 IER5LQ5T953 404 aa11.93□□□□□ -0.5
GPD2-209ENST00000464846 IFNL1Q8IU54 200 aa11.89□□□□□ -0.51
GPD2-209ENST00000464846 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
GPD2-209ENST00000464846 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
GPD2-209ENST00000464846 IRX5P78411 483 aaPredicted RBP11.86□□□□□ -0.51
GPD2-209ENST00000464846 POTEB3A0JP26 581 aa11.82□□□□□ -0.52
GPD2-209ENST00000464846 POTEBQ6S5H4 581 aa11.82□□□□□ -0.52
GPD2-209ENST00000464846 TMEM106CQ9BVX2 250 aa11.82□□□□□ -0.52
GPD2-209ENST00000464846 NUBP1P53384 320 aa11.8□□□□□ -0.52
GPD2-209ENST00000464846 MIER1Q8N108 512 aa11.78□□□□□ -0.52
GPD2-209ENST00000464846 SGIP1Q9BQI5 828 aa11.78□□□□□ -0.52
GPD2-209ENST00000464846 KRTAP3-3Q9BYR6 98 aa11.78□□□□□ -0.52
GPD2-209ENST00000464846 KRTAP3-2Q9BYR7 98 aa11.78□□□□□ -0.52
GPD2-209ENST00000464846 PLCG2P16885 1265 aa11.77□□□□□ -0.53
GPD2-209ENST00000464846 TMEM121BQ9BXQ6 578 aaPredicted RBP11.76□□□□□ -0.53
GPD2-209ENST00000464846 EHMT2Q96KQ7 1210 aa11.75□□□□□ -0.53
GPD2-209ENST00000464846 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
GPD2-209ENST00000464846 PDCD7Q8N8D1 485 aaKnown RBP11.64□□□□□ -0.55
GPD2-209ENST00000464846 HS3ST6Q96QI5 342 aa11.63□□□□□ -0.55
GPD2-209ENST00000464846 EMP3P54852 163 aa11.61□□□□□ -0.55
GPD2-209ENST00000464846 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.61□□□□□ -0.55
GPD2-209ENST00000464846 PLEKHG5O94827 1062 aa11.59□□□□□ -0.55
GPD2-209ENST00000464846 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
GPD2-209ENST00000464846 PCDHB8Q9UN66 801 aa11.59□□□□□ -0.55
GPD2-209ENST00000464846 FAM205CA6NFA0 338 aa11.57□□□□□ -0.56
GPD2-209ENST00000464846 SNPHO15079 494 aa11.57□□□□□ -0.56
GPD2-209ENST00000464846 PYGBP11216 843 aa11.56□□□□□ -0.56
GPD2-209ENST00000464846 FAM212AQ96EL1 285 aa11.53□□□□□ -0.56
GPD2-209ENST00000464846 HOXB3P14651 431 aaPredicted RBP11.45□□□□□ -0.58
GPD2-209ENST00000464846 C3orf67Q6ZVT6 689 aa11.44□□□□□ -0.58
GPD2-209ENST00000464846 DPY19L2Q6NUT2 758 aa11.42□□□□□ -0.58
GPD2-209ENST00000464846 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
GPD2-209ENST00000464846 DCAF8Q5TAQ9 597 aa11.37□□□□□ -0.59
GPD2-209ENST00000464846 ILDR1Q86SU0 546 aaPredicted RBP11.37□□□□□ -0.59
GPD2-209ENST00000464846 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.6
GPD2-209ENST00000464846 RNF166Q96A37 237 aaPredicted RBP11.32□□□□□ -0.6
GPD2-209ENST00000464846 L3MBTL3Q96JM7 780 aaPredicted RBP11.32□□□□□ -0.6
GPD2-209ENST00000464846 HOXB1P14653 301 aaPredicted RBP11.28□□□□□ -0.6
GPD2-209ENST00000464846 MKRN3Q13064 507 aaKnown RBP11.28□□□□□ -0.6
GPD2-209ENST00000464846 PSEN1P49768 467 aa11.23□□□□□ -0.61
GPD2-209ENST00000464846 VARS2Q5ST30 1063 aaKnown RBP11.22□□□□□ -0.61
GPD2-209ENST00000464846 ERBB3P21860 1342 aa11.21□□□□□ -0.61
GPD2-209ENST00000464846 MYT1LQ9UL68 1186 aa11.21□□□□□ -0.61
GPD2-209ENST00000464846 GOLGA2Q08379 1002 aa11.2□□□□□ -0.62
GPD2-209ENST00000464846 ZNF467Q7Z7K2 595 aaPredicted RBP11.2□□□□□ -0.62
GPD2-209ENST00000464846 BOLA1Q9Y3E2 137 aa11.19□□□□□ -0.62
GPD2-209ENST00000464846 TMEM92Q6UXU6 159 aa11.17□□□□□ -0.62
GPD2-209ENST00000464846 ZNF710Q8N1W2 664 aa11.13□□□□□ -0.63
GPD2-209ENST00000464846 CABP2Q9NPB3 220 aa11.13□□□□□ -0.63
GPD2-209ENST00000464846 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
GPD2-209ENST00000464846 FKBP8Q14318 412 aa11.11□□□□□ -0.63
GPD2-209ENST00000464846 DOK7Q18PE1 504 aa11.09□□□□□ -0.63
GPD2-209ENST00000464846 ZNF687Q8N1G0 1237 aa11.08□□□□□ -0.64
GPD2-209ENST00000464846 PDAP1Q13442 181 aaKnown RBP11.06□□□□□ -0.64
GPD2-209ENST00000464846 GPR153Q6NV75 609 aa11.06□□□□□ -0.64
GPD2-209ENST00000464846 GSE1Q14687 1217 aa11.05□□□□□ -0.64
GPD2-209ENST00000464846 KHSRPQ92945 711 aaKnown RBP eCLIP11.01□□□□□ -0.65
GPD2-209ENST00000464846 MICALL2Q8IY33 904 aa10.98□□□□□ -0.65
GPD2-209ENST00000464846 POTEEQ6S8J3 1075 aa10.97□□□□□ -0.65
GPD2-209ENST00000464846 ANKRD13DQ6ZTN6 518 aa10.97□□□□□ -0.65
GPD2-209ENST00000464846 G3V3G9 751 aa10.96□□□□□ -0.65
GPD2-209ENST00000464846 VASPP50552 380 aaPredicted RBP10.96□□□□□ -0.65
GPD2-209ENST00000464846 EFCAB3Q8N7B9 438 aa10.96□□□□□ -0.65
GPD2-209ENST00000464846 ARSIQ5FYB1 569 aa10.94□□□□□ -0.66
GPD2-209ENST00000464846 KLHL34Q8N239 644 aa10.94□□□□□ -0.66
GPD2-209ENST00000464846 RIMBP2O15034 1052 aa10.93□□□□□ -0.66
GPD2-209ENST00000464846 MS4A4AQ96JQ5 239 aa10.93□□□□□ -0.66
GPD2-209ENST00000464846 ZSWIM6Q9HCJ5 1215 aa10.93□□□□□ -0.66
GPD2-209ENST00000464846 LSM11P83369 360 aaKnown RBP eCLIP10.92□□□□□ -0.66
GPD2-209ENST00000464846 PTGER2P43116 358 aa10.91□□□□□ -0.66
GPD2-209ENST00000464846 PLA2G2EQ9NZK7 142 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms